FFCP PHASE1:Hg19::chr13:28971176..28971189,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr13:28971176..28971189,- | |||
|id=chr13:28971176..28971189,- | |||
|ontology_enrichment_celltype=CL:0002541!6.87e-08!3;CL:0002057!6.31e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.91e-39;3!CL:0000349;3.31e-14;19!CL:0002537;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.91e-39,3;CL:0000349,3.02e-14,19;CL:0002537,5.38e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.37e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.40e-21!115;UBERON:0002298!3.96e-11!8;UBERON:0001049!1.10e-09!57;UBERON:0005068!1.10e-09!57;UBERON:0006241!1.10e-09!57;UBERON:0007135!1.10e-09!57;UBERON:0002616!3.47e-09!59;UBERON:0001017!3.89e-08!82;UBERON:0000476!6.87e-08!3;UBERON:0000920!6.87e-08!3;UBERON:0000955!8.24e-08!69;UBERON:0006238!8.24e-08!69;UBERON:0002020!8.34e-08!34;UBERON:0003528!8.34e-08!34;UBERON:0005743!1.69e-07!86;UBERON:0002771!4.83e-07!3;UBERON:0006947!4.83e-07!3;UBERON:0004054!4.83e-07!3;UBERON:0004733!5.10e-07!12;UBERON:0002028!5.10e-07!12;UBERON:0007277!5.10e-07!12;UBERON:0002308!7.16e-07!9;UBERON:0000125!7.16e-07!9;UBERON:0003075!8.55e-07!86;UBERON:0007284!8.55e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.91e-39;3!UBERON:0000920;6.91e-39;3!UBERON:0005631;3.03e-26;10!UBERON:0000158;3.03e-26;10!UBERON:0000478;2.11e-19;24!UBERON:0001987;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.91e-39,3;UBERON:0003124,4.92e-37,7;UBERON:0005631,8.19e-33,14;UBERON:0000158,8.19e-33,14;UBERON:0000478,2.02e-19,24;UBERON:0001987,2.43e-08,4;UBERON:0004340,2.43e-08,4;UBERON:0004923,2.26e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697287110717054,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0,0,0.918251677112708,0,0.639337125799041,0,0,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0.217188844705117,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0.516833518338658,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0.295547618953547,0,0,0,0,0,0,0,0,10.5270382711533,0.366390373607449,49.0391993937144,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0.408610218334727,0,0.275078873194468,0.415440338029185,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.1251909307065,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06442844195167,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.413731983447581,0.213233981900981,0.476128862927481,0,0,0,0,0,0.435433495793923,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr13:28971176..28971189,- | |||
}} |
Revision as of 17:07, 11 January 2014
Short description: | p@chr13:28971176..28971189, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:28971176..28971189, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.91e-39 | 3 |
extraembryonic cell | 3.02e-14 | 19 |
amnion mesenchymal stem cell | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.91e-39 | 3 |
chorion | 4.92e-37 | 7 |
extraembryonic membrane | 8.19e-33 | 14 |
membranous layer | 8.19e-33 | 14 |
extraembryonic structure | 2.02e-19 | 24 |
placenta | 2.43e-08 | 4 |
allantois | 2.43e-08 | 4 |
organ component layer | 2.26e-07 | 66 |