FFCP PHASE1:Hg19::chr12:120189930..120189977,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11113 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1985 | |||
|TSSclassifier=weak | |||
|UniProt=F5H4K4 | |||
|association_with_transcript=-30bp_to_ENST00000546026_5end | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_7_at_CIT_5end | |||
|id=chr12:120189930..120189977,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000239;1.83e-14;3!CL:1000615;1.83e-14;3!CL:0002306;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.60e-14,3;CL:1000615,1.60e-14,3;CL:0002306,1.60e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.90e-17;10!UBERON:0007687;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.32e-14!22;UBERON:0001950!2.52e-14!20;UBERON:0001049!5.38e-14!57;UBERON:0005068!5.38e-14!57;UBERON:0006241!5.38e-14!57;UBERON:0007135!5.38e-14!57;UBERON:0002780!7.74e-14!41;UBERON:0001890!7.74e-14!41;UBERON:0006240!7.74e-14!41;UBERON:0003080!2.26e-13!42;UBERON:0002616!2.81e-13!59;UBERON:0003056!8.73e-13!61;UBERON:0000956!1.98e-12!25;UBERON:0000203!1.98e-12!25;UBERON:0003075!2.33e-12!86;UBERON:0007284!2.33e-12!86;UBERON:0002020!2.63e-12!34;UBERON:0003528!2.63e-12!34;UBERON:0001893!3.28e-12!34;UBERON:0000955!5.88e-12!69;UBERON:0006238!5.88e-12!69;UBERON:0001869!7.10e-12!32;UBERON:0002346!2.00e-11!90;UBERON:0002791!4.10e-11!33;UBERON:0005743!5.63e-11!86;UBERON:0001017!6.95e-11!82;UBERON:0000073!6.29e-10!94;UBERON:0001016!6.29e-10!94;UBERON:0000033!1.01e-09!123;UBERON:0000153!1.43e-09!129;UBERON:0007811!1.43e-09!129;UBERON:0007023!1.20e-08!115;UBERON:0000200!2.45e-08!6;UBERON:0002771!9.54e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;5.69e-21;2!UBERON:0010225;5.69e-21;2!UBERON:0002113;1.07e-15;24!UBERON:0011143;1.07e-15;24!UBERON:0006853;1.83e-14;3!UBERON:0007685;1.83e-14;3!UBERON:0004134;1.83e-14;3!UBERON:0000489;3.85e-13;29!UBERON:0006554;9.88e-13;30!UBERON:0001008;9.88e-13;30!UBERON:0002784;3.42e-11;4!UBERON:0001894;6.04e-07;7!UBERON:0005172;8.22e-07;52!UBERON:0005173;8.22e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,6.96e-21,2;UBERON:0010225,6.96e-21,2;UBERON:0002113,1.41e-14,26;UBERON:0003918,1.41e-14,26;UBERON:0011143,1.41e-14,26;UBERON:0005095,1.41e-14,26;UBERON:0007687,1.41e-14,26;UBERON:0006853,1.60e-14,3;UBERON:0007685,1.60e-14,3;UBERON:0004134,1.60e-14,3;UBERON:0000489,2.30e-12,31;UBERON:0002784,3.79e-11,4;UBERON:0006554,2.00e-08,47;UBERON:0001008,2.89e-08,48;UBERON:0005172,1.99e-07,54;UBERON:0005173,1.99e-07,54;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7;UBERON:0002417,9.34e-07,60;UBERON:0000916,9.34e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.087834785693126,1.24430121722827,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0.422206515571503,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,1.52925763827023,0,0.447749509444357,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0.658156191461918,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,6.85609653503024,2.7800931711549,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0.319267718114302,0.615349092722265,0,0.345786262321089,0.161475645631851,0,0,0,0.366857197043358,0,0,0,0,0,0.20170506870352,0,0,0,0,0.270150338473579,0.781078098613847,0.826747186004736,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.460409414939944,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0,0.157771562193185,0.0679914901909147,0,0,0.371995018166751,0,0,0.252332849670158,0.109265571963696,0,0,0,0,0,0,0.267964130156178,0.829169439458779,1.24119595034274,0,0,0,0,0,0.190941474834495,0,0,0,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p7@CIT | |||
}} |
Revision as of 16:13, 11 January 2014
Short description: | p7@CIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CIT_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -30bp_to_ENST00000546026_5end |
EntrezGene: | CIT |
HGNC: | 1985 |
UniProt: | F5H4K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.60e-14 | 3 |
kidney cortex tubule cell | 1.60e-14 | 3 |
epithelial cell of proximal tubule | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 6.96e-21 | 2 |
thalamic complex | 6.96e-21 | 2 |
kidney | 1.41e-14 | 26 |
kidney mesenchyme | 1.41e-14 | 26 |
upper urinary tract | 1.41e-14 | 26 |
kidney rudiment | 1.41e-14 | 26 |
kidney field | 1.41e-14 | 26 |
renal cortex tubule | 1.60e-14 | 3 |
region of nephron tubule | 1.60e-14 | 3 |
proximal tubule | 1.60e-14 | 3 |
cavitated compound organ | 2.30e-12 | 31 |
regional part of diencephalon | 3.79e-11 | 4 |
urinary system structure | 2.00e-08 | 47 |
renal system | 2.89e-08 | 48 |
abdomen element | 1.99e-07 | 54 |
abdominal segment element | 1.99e-07 | 54 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |
abdominal segment of trunk | 9.34e-07 | 60 |
abdomen | 9.34e-07 | 60 |