FFCP PHASE1:Hg19::chr12:75699143..75699146,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-85bp_to_ENST00000547243_5end | |||
|description=CAGE_peak_1_at_ENST00000547243_5end | |||
|id=chr12:75699143..75699146,+ | |||
|ontology_enrichment_celltype=CL:0000197!6.26e-08!6;CL:0000098!6.26e-08!6;CL:0002167!6.26e-08!6;CL:0000075!5.52e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000228;1.65e-16;1!CL:0000342;1.65e-16;1!CL:0002565;1.65e-16;1!CL:0002566;1.65e-16;1!CL:0002372;1.65e-16;1!CL:0000737;3.87e-16;4!CL:0002588;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,8.86e-17,1;CL:0002372,8.86e-17,1;CL:0000342,2.63e-16,1;CL:0002565,2.63e-16,1;CL:0000737,2.85e-16,4;CL:0002566,3.07e-16,1;CL:0002588,5.49e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.10e-07!34;UBERON:0003528!1.10e-07!34;UBERON:0002780!2.09e-07!41;UBERON:0001890!2.09e-07!41;UBERON:0006240!2.09e-07!41;UBERON:0002616!2.77e-07!59;UBERON:0003080!3.57e-07!42;UBERON:0003056!5.81e-07!61;UBERON:0001869!8.96e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;1.65e-16;1!UBERON:0001769;1.65e-16;1!UBERON:0003296;2.34e-16;4!UBERON:0010133;2.34e-16;4!UBERON:0001894;9.31e-10;7!UBERON:0000007;3.86e-09;2!UBERON:0001954;3.86e-09;2!UBERON:0003022;3.86e-09;2!UBERON:0002421;3.86e-09;2!UBERON:0002600;3.86e-09;2!UBERON:0001905;6.42e-09;2!UBERON:0001875;6.42e-09;2!UBERON:0002757;6.42e-09;2!UBERON:0010134;6.42e-09;2!UBERON:0005408;6.42e-09;2!UBERON:0006514;6.42e-09;2!UBERON:0001899;6.42e-09;2!UBERON:0002780;1.00e-07;41!UBERON:0001890;1.00e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.44e-16,4;UBERON:0010133,2.44e-16,4;UBERON:0002506,2.63e-16,1;UBERON:0001769,2.63e-16,1;UBERON:0001894,9.52e-10,7;UBERON:0006222,9.52e-10,7;UBERON:0002780,3.31e-09,41;UBERON:0001890,3.31e-09,41;UBERON:0003080,3.31e-09,41;UBERON:0006240,3.31e-09,41;UBERON:0000007,3.43e-09,2;UBERON:0001954,3.71e-09,2;UBERON:0003022,3.71e-09,2;UBERON:0002421,3.71e-09,2;UBERON:0002600,3.71e-09,2;UBERON:0001875,5.94e-09,2;UBERON:0006514,5.94e-09,2;UBERON:0001905,7.49e-09,2;UBERON:0002757,7.49e-09,2;UBERON:0010134,7.49e-09,2;UBERON:0005408,7.49e-09,2;UBERON:0001899,7.49e-09,2;UBERON:0003056,1.10e-08,61;UBERON:0000073,3.77e-07,53;UBERON:0002616,3.77e-07,53;UBERON:0001049,9.04e-07,56;UBERON:0005068,9.04e-07,56;UBERON:0006241,9.04e-07,56;UBERON:0007135,9.04e-07,56 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0.80823028409406,0,0,0,0,0,0,0,0,0,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,1.0159663086747,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.535286966391485,0.473107245101804,0.117141414992713,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,1.27723753317057,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,1.14241563650639,0,0,0,0.928067519756987,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,2.34323429584154,0,0.0634158101939068,0,0,0,0,0,1.07140367175657,0,2.42786241694653,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000547243 | |||
}} |
Revision as of 14:44, 11 January 2014
Short description: | p1@ENST00000547243 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000547243_5end |
Coexpression cluster: | NA |
Association with transcript: | -85bp_to_ENST00000547243_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 8.86e-17 | 1 |
myotube | 8.86e-17 | 1 |
pigment cell (sensu Vertebrata) | 2.63e-16 | 1 |
iris pigment epithelial cell | 2.63e-16 | 1 |
striated muscle cell | 2.85e-16 | 4 |
dark melanocyte | 3.07e-16 | 1 |
smooth muscle cell of the umbilical vein | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.44e-16 | 4 |
neuroendocrine gland | 2.44e-16 | 4 |
iris epithelium | 2.63e-16 | 1 |
iris | 2.63e-16 | 1 |
diencephalon | 9.52e-10 | 7 |
future diencephalon | 9.52e-10 | 7 |
regional part of forebrain | 3.31e-09 | 41 |
forebrain | 3.31e-09 | 41 |
anterior neural tube | 3.31e-09 | 41 |
future forebrain | 3.31e-09 | 41 |
pituitary gland | 3.43e-09 | 2 |
Ammon's horn | 3.71e-09 | 2 |
lobe parts of cerebral cortex | 3.71e-09 | 2 |
hippocampal formation | 3.71e-09 | 2 |
limbic lobe | 3.71e-09 | 2 |
globus pallidus | 5.94e-09 | 2 |
pallidum | 5.94e-09 | 2 |
pineal body | 7.49e-09 | 2 |
regional part of epithalamus | 7.49e-09 | 2 |
secretory circumventricular organ | 7.49e-09 | 2 |
circumventricular organ | 7.49e-09 | 2 |
epithalamus | 7.49e-09 | 2 |
pre-chordal neural plate | 1.10e-08 | 61 |
regional part of nervous system | 3.77e-07 | 53 |
regional part of brain | 3.77e-07 | 53 |
neural tube | 9.04e-07 | 56 |
neural rod | 9.04e-07 | 56 |
future spinal cord | 9.04e-07 | 56 |
neural keel | 9.04e-07 | 56 |