FFCP PHASE1:Hg19::chr12:13349652..13349667,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3333 | |||
|TSSclassifier=strong | |||
|UniProt=P54849,F5H2P5 | |||
|association_with_transcript=0bp_to_ENST00000431267,ENST00000542289,ENST00000542474,ENST00000544053_5end | |||
|description=CAGE_peak_2_at_EMP1_5end | |||
|id=chr12:13349652..13349667,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.22e-23!180;CL:0000057!4.31e-17!75;CL:0002620!1.35e-09!23;CL:0000222!3.06e-09!119;CL:0002371!6.65e-09!591;CL:0000048!7.43e-09!430;CL:0000680!7.51e-09!57;CL:0000056!7.51e-09!57;CL:0000355!7.51e-09!57;CL:0000723!1.99e-08!436;CL:0000187!2.75e-08!54;CL:0002057!5.21e-08!42;CL:0000183!1.77e-07!59;CL:0000034!2.33e-07!444;CL:0000393!2.62e-07!60;CL:0000211!2.62e-07!60;CL:0000860!6.97e-07!45;CL:0000136!7.52e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.91e-13;33!CL:0002057;3.91e-13;33!CL:0000473;8.78e-13;39!CL:0000234;8.78e-13;39!CL:0002620;1.19e-09;23!CL:0000057;4.45e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.87e-17,76;CL:0000222,6.99e-10,121;CL:0000473,1.15e-09,48;CL:0000234,1.15e-09,48;CL:0002620,1.24e-09,23;CL:0000048,1.71e-09,427;CL:0000680,2.85e-09,58;CL:0000056,2.85e-09,58;CL:0000355,2.85e-09,58;CL:0000723,4.44e-09,433;CL:0000187,1.06e-08,55;CL:0000034,7.60e-08,441;CL:0000860,8.05e-08,42;CL:0002057,8.05e-08,42;CL:0000393,8.85e-08,61;CL:0000211,8.85e-08,61;CL:0000136,7.09e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.94e-18!659;UBERON:0000467!1.89e-17!625;UBERON:0000480!2.72e-17!626;UBERON:0002204!1.64e-15!167;UBERON:0000926!2.92e-14!448;UBERON:0004120!2.92e-14!448;UBERON:0006603!2.92e-14!448;UBERON:0000914!2.11e-13!83;UBERON:0002329!2.11e-13!83;UBERON:0003077!2.11e-13!83;UBERON:0003059!2.11e-13!83;UBERON:0007282!2.11e-13!83;UBERON:0009618!2.11e-13!83;UBERON:0007285!2.11e-13!83;UBERON:0004290!9.21e-12!70;UBERON:0004872!1.42e-11!84;UBERON:0002050!4.77e-11!605;UBERON:0005423!4.77e-11!605;UBERON:0003081!5.42e-11!216;UBERON:0000923!9.93e-11!604;UBERON:0005291!9.93e-11!604;UBERON:0006598!9.93e-11!604;UBERON:0002532!9.93e-11!604;UBERON:0000486!2.33e-10!82;UBERON:0000922!2.62e-10!612;UBERON:0000055!4.41e-10!69;UBERON:0003102!8.22e-10!95;UBERON:0001981!1.41e-09!60;UBERON:0007500!1.41e-09!60;UBERON:0004537!1.41e-09!60;UBERON:0006965!1.41e-09!60;UBERON:0002049!2.65e-09!79;UBERON:0007798!2.65e-09!79;UBERON:0001637!7.79e-09!42;UBERON:0003509!7.79e-09!42;UBERON:0004572!7.79e-09!42;UBERON:0000062!8.64e-09!511;UBERON:0001134!8.68e-09!61;UBERON:0002036!8.68e-09!61;UBERON:0003082!8.68e-09!61;UBERON:0002199!1.20e-08!45;UBERON:0002416!1.20e-08!45;UBERON:0002385!1.20e-08!63;UBERON:0001015!1.20e-08!63;UBERON:0000383!1.20e-08!63;UBERON:0002097!9.70e-08!40;UBERON:0004573!1.02e-07!33;UBERON:0004571!1.02e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.16e-07;33!UBERON:0004571;2.16e-07;33!UBERON:0001637;7.00e-07;42!UBERON:0003509;7.00e-07;42!UBERON:0004572;7.00e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.26e-19,315;UBERON:0004120,7.26e-19,315;UBERON:0006603,7.26e-19,315;UBERON:0002204,3.36e-17,167;UBERON:0002329,3.22e-12,71;UBERON:0003059,3.22e-12,71;UBERON:0007282,3.22e-12,71;UBERON:0004290,3.22e-12,71;UBERON:0009618,3.22e-12,71;UBERON:0007524,3.61e-12,73;UBERON:0004872,8.01e-12,83;UBERON:0003081,8.17e-12,203;UBERON:0003077,8.45e-12,72;UBERON:0007285,8.45e-12,72;UBERON:0007503,1.82e-11,78;UBERON:0000486,1.02e-10,83;UBERON:0002050,1.11e-10,564;UBERON:0000923,1.55e-10,560;UBERON:0010316,1.55e-10,560;UBERON:0005291,1.55e-10,560;UBERON:0006598,1.55e-10,560;UBERON:0010317,1.55e-10,560;UBERON:0002532,1.55e-10,560;UBERON:0000055,2.69e-10,68;UBERON:0005423,6.97e-10,581;UBERON:0007500,8.42e-10,59;UBERON:0001981,8.42e-10,59;UBERON:0004537,8.42e-10,59;UBERON:0006965,8.42e-10,59;UBERON:0003102,9.56e-10,99;UBERON:0000922,1.73e-09,592;UBERON:0002049,1.75e-09,78;UBERON:0007798,1.75e-09,78;UBERON:0001134,3.36e-09,62;UBERON:0002036,3.36e-09,62;UBERON:0003082,3.36e-09,62;UBERON:0002199,3.72e-09,46;UBERON:0002416,3.72e-09,46;UBERON:0002385,4.73e-09,64;UBERON:0001015,4.73e-09,64;UBERON:0000383,4.73e-09,64;UBERON:0001637,7.19e-09,42;UBERON:0003509,7.19e-09,42;UBERON:0004572,7.19e-09,42;UBERON:0002097,3.07e-08,41;UBERON:0004573,9.56e-08,33;UBERON:0004571,9.56e-08,33;UBERON:0001434,1.44e-07,100;UBERON:0004923,2.81e-07,66 | |||
|phase1_expression=118.999338422215,83.9274053652654,138.981042438628,112.082094155506,68.385047447375,146.552872048862,17.7309914717817,223.628835193098,21.4172215123868,27.2764669516675,9.07141518364156,105.070299994613,65.9417445571134,59.5316157737824,57.6631433766573,111.605974310995,94.6230408997644,96.4009319311333,68.310591830671,33.4889277968863,28.1520953917069,14.418917187992,16.6016872536013,28.7436292653057,14.3118609138075,0,0,0,16.9146639045029,22.6459344877355,27.4024538269455,7.35536979583142,7.53014796945625,4.80680213216824,0,0,13.2120197700681,4.43196326825502,9.6261334785668,8.68043482863407,10.9718582377563,17.1663642990059,6.18181362322048,133.62098143842,96.3583656406464,126.386295878852,197.099823296021,163.233651544665,336.960531533873,692.763280711738,314.309186911206,429.451729477671,224.084692478802,105.214003424164,201.785465025569,152.099810350425,82.9634696175851,120.002340693675,272.720748102474,116.176307801546,238.472747923042,342.385649593811,217.415386807579,278.324762097849,155.84236114355,79.4339314567596,194.320541686619,726.108642591988,437.002685636129,539.49709024751,169.511860737343,78.8114141013388,147.155010160011,1.26753171787165,1.06302149982522,0.838634582033504,1.46027220490444,2.55300717830561,1.44653028027372,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,7.93027971474155,15.1337312005015,3.423993102076,2.75393678159366,1.17903228824749,2.46721798799411,0.167186495390678,0,0,0,1.11410456885174,0.294605907474837,0,0.270803863765016,3.0741916734162,3.90178042679635,0,0,0,0.296573126324121,0.535081656179426,0,0.113309342697566,0.383220493601921,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,1.00803371612366,1.87208137048455,2.46201486600758,124.34150182012,57.0095730748091,71.4751720705334,165.539131792131,59.6592113656709,113.704517384247,12.7245751528176,32.6045363102766,17.6780108096807,16.6297048096923,14.1414004965933,18.4025601074286,6.9216104775583,24.4717732237723,3.24547393654683,2.78607579678828,12.3650903282545,0.715471872916026,0.571994910780128,0.74291500265913,46.3116409164423,86.8836941057186,52.0710752411391,50.8777147731609,52.4374295262382,80.0593502045596,69.1773339236843,52.2001853522044,43.7592503104654,49.2039300764065,56.3961043952806,76.0272105718513,35.6330604020327,78.31223611367,50.2288007686691,40.4527769126881,23.3510547531217,25.1123601477809,68.9924868596475,52.2096112762471,68.3342504860419,0,0,1.3082821564276,83.9882598365088,51.6652487591485,58.3924487386295,213.980119078615,62.7763036491092,39.8081096101038,23.4847790605351,15.2933880018639,58.1964636197563,53.8842688278752,77.9713277851198,12.8653813498192,31.6896758463999,32.5706790248977,182.613644945737,114.09436430889,229.104827285911,97.9403718688999,132.897687326236,146.490191390445,144.132844905955,138.065772658427,133.393583497913,205.524494309795,161.218037889619,91.0161361938027,22.9957805381196,129.618807744631,109.728941927713,147.952237668554,85.6006360717634,96.2371678808922,122.143541891063,65.6772340496522,205.042353592369,96.1008249683553,120.377319858631,230.469961792821,99.8579008320473,96.6152025171109,72.2133402566568,184.978860136428,55.1493449212384,133.537466575137,110.367828472117,83.0860732048693,149.459038449495,50.0737928191372,45.9509205161421,25.1239109112286,6.2731607735892,16.0610573417842,0.365921118388786,0.265059536642971,0.464775771478074,3.21349270547648,1.26160425437814,0.36497735907583,111.079167954169,57.8916844373597,66.3047622491907,191.319586349175,137.157101517221,6.15195360207188,7.75489574359268,7.23033089650446,7.279402200338,5.88274499049497,6.8808479542218,6.60673409984806,6.67152981426177,7.31019598198142,66.4339909162183,21.0362660705169,31.2796248611864,19.1111324801205,1.26755034821831,0.982827216677626,1.77236972004421,0,2.45976877086227,26.4214427859729,20.9623045130475,12.3641928583382,65.9470059020298,18.702865922023,27.042089340757,67.5957610431726,43.299402607582,9.5062932079563,10.8015998696956,56.736013970102,60.1881166349594,55.7444666047373,0,0,81.4978290149285,95.7077444419482,69.8566462757023,16.8720901176199,6.55130299975552,13.6104093352691,13.4337784054272,17.1474023723238,26.4534048623996,1.97065295158377,0.088048434013226,57.2225598892531,11.8178361801908,37.872730027914,140.076354808525,52.332414301484,52.7478512445211,58.1646316477198,190.333688993852,88.6012020639557,164.921851627844,65.2602910889999,33.1329652313293,93.5796527075322,24.9494411412511,28.6125156681506,202.027357860884,30.848821523845,46.8033466101147,84.6212261322447,78.017022612803,80.7259202418781,20.8747870740895,51.5490525121871,29.6366521241077,174.594594781442,16.3480296421571,38.805641773738,13.2633325906218,6.10073421020206,20.3944902011396,150.813487995076,96.9356186464004,96.9836121621945,64.9383358382189,22.9723871668228,61.3338691675089,58.491647893702,81.5741000525022,62.1341542442438,1.00876629594175,1.57624608161542,1.2937654491571,2.31017465303547,51.3271140929376,33.8363620029816,188.682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| |||
|short_description=p2@EMP1 | |||
}} |
Revision as of 12:21, 11 January 2014
Short description: | p2@EMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000431267, ENST00000542289, ENST00000542474, ENST00000544053_5end |
EntrezGene: | EMP1 |
HGNC: | 3333 |
UniProt: | P54849F5H2P5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.87e-17 | 76 |
mesodermal cell | 6.99e-10 | 121 |
defensive cell | 1.15e-09 | 48 |
phagocyte | 1.15e-09 | 48 |
skin fibroblast | 1.24e-09 | 23 |
multi fate stem cell | 1.71e-09 | 427 |
muscle precursor cell | 2.85e-09 | 58 |
myoblast | 2.85e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.85e-09 | 58 |
somatic stem cell | 4.44e-09 | 433 |
muscle cell | 1.06e-08 | 55 |
stem cell | 7.60e-08 | 441 |
classical monocyte | 8.05e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.05e-08 | 42 |
electrically responsive cell | 8.85e-08 | 61 |
electrically active cell | 8.85e-08 | 61 |
fat cell | 7.09e-07 | 15 |