FFCP PHASE1:Hg19::chr12:5019061..5019078,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3736 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6218 | |||
|TSSclassifier=strong | |||
|UniProt=Q09470 | |||
|association_with_transcript=0bp_to_ENST00000382545,NM_000217,uc001qnh.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_KCNA1_5end | |||
|id=chr12:5019061..5019078,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000128;3.54e-08;7!CL:0000126;3.54e-08;7!CL:0000127;3.54e-08;7!CL:0002603;6.32e-08;3!CL:0000064;1.15e-07;3!CL:0000067;1.15e-07;3!CL:0005012;1.15e-07;3!CL:0002304;1.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.55e-08,7;CL:0000126,3.55e-08,7;CL:0000127,3.55e-08,7;CL:0002453,3.55e-08,7;CL:0002603,5.34e-08,3;CL:0000064,1.24e-07,3;CL:0000067,1.24e-07,3;CL:0005012,1.24e-07,3;CL:0002304,1.24e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.95e-16;82!UBERON:0006215;2.27e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.80e-67!57;UBERON:0005068!6.80e-67!57;UBERON:0006241!6.80e-67!57;UBERON:0007135!6.80e-67!57;UBERON:0002616!8.30e-61!59;UBERON:0001017!2.22e-59!82;UBERON:0005743!1.40e-57!86;UBERON:0003075!6.72e-56!86;UBERON:0007284!6.72e-56!86;UBERON:0000955!3.66e-55!69;UBERON:0006238!3.66e-55!69;UBERON:0007023!1.46e-53!115;UBERON:0002346!2.08e-52!90;UBERON:0000073!5.00e-50!94;UBERON:0001016!5.00e-50!94;UBERON:0000153!2.27e-47!129;UBERON:0007811!2.27e-47!129;UBERON:0003080!5.83e-47!42;UBERON:0002780!5.76e-46!41;UBERON:0001890!5.76e-46!41;UBERON:0006240!5.76e-46!41;UBERON:0000033!1.07e-44!123;UBERON:0001893!2.72e-40!34;UBERON:0003056!3.30e-40!61;UBERON:0002020!5.57e-40!34;UBERON:0003528!5.57e-40!34;UBERON:0002791!8.58e-39!33;UBERON:0001869!2.06e-38!32;UBERON:0004121!5.96e-36!169;UBERON:0000924!1.61e-34!173;UBERON:0006601!1.61e-34!173;UBERON:0000956!4.74e-29!25;UBERON:0000203!4.74e-29!25;UBERON:0002619!2.41e-26!22;UBERON:0001950!8.91e-24!20;UBERON:0003076!2.61e-20!15;UBERON:0003057!2.61e-20!15;UBERON:0004733!5.03e-17!12;UBERON:0002028!5.03e-17!12;UBERON:0007277!5.03e-17!12;UBERON:0004732!2.05e-15!13;UBERON:0000475!2.34e-15!365;UBERON:0000064!2.17e-14!219;UBERON:0000477!4.13e-14!286;UBERON:0002680!1.91e-13!9;UBERON:0001895!1.91e-13!9;UBERON:0010092!1.91e-13!9;UBERON:0002420!1.88e-12!9;UBERON:0007245!1.88e-12!9;UBERON:0010009!1.88e-12!9;UBERON:0010011!1.88e-12!9;UBERON:0000454!1.88e-12!9;UBERON:0000119!2.52e-12!312;UBERON:0000481!2.53e-12!347;UBERON:0002308!2.95e-12!9;UBERON:0000125!2.95e-12!9;UBERON:0000483!3.34e-12!309;UBERON:0000025!4.89e-12!194;UBERON:0004111!5.77e-11!241;UBERON:0002298!1.52e-10!8;UBERON:0000200!5.34e-10!6;UBERON:0009663!6.17e-10!7;UBERON:0002037!1.18e-09!6;UBERON:0006215!1.18e-09!6;UBERON:0000062!3.05e-09!511;UBERON:0000922!4.11e-09!612;UBERON:0001871!5.89e-09!7;UBERON:0001872!2.48e-08!5;UBERON:0000349!3.83e-08!5;UBERON:0000468!1.30e-07!659;UBERON:0000369!4.23e-07!4;UBERON:0002435!4.23e-07!4;UBERON:0000204!4.23e-07!4;UBERON:0010082!4.23e-07!4;UBERON:0001894!4.26e-07!7;UBERON:0006222!4.26e-07!7;UBERON:0000923!8.15e-07!604;UBERON:0005291!8.15e-07!604;UBERON:0006598!8.15e-07!604;UBERON:0002532!8.15e-07!604;UBERON:0002050!9.43e-07!605;UBERON:0005423!9.43e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.44e-53;32!UBERON:0001893;6.28e-53;34!UBERON:0000073;3.51e-52;53!UBERON:0002616;3.51e-52;53!UBERON:0003528;2.78e-51;34!UBERON:0002020;2.78e-51;34!UBERON:0002791;1.72e-49;32!UBERON:0002780;2.92e-46;41!UBERON:0001890;2.92e-46;41!UBERON:0000956;1.87e-43;25!UBERON:0000203;1.87e-43;25!UBERON:0002619;1.04e-41;22!UBERON:0001950;3.10e-37;20!UBERON:0000955;1.48e-34;68!UBERON:0001017;2.17e-33;75!UBERON:0004733;1.57e-28;12!UBERON:0002028;1.57e-28;12!UBERON:0001016;1.45e-26;83!UBERON:0004732;4.24e-26;13!UBERON:0002680;3.20e-22;9!UBERON:0001895;3.20e-22;9!UBERON:0002420;3.68e-17;9!UBERON:0007245;3.68e-17;9!UBERON:0010009;3.68e-17;9!UBERON:0010011;3.68e-17;9!UBERON:0000454;3.68e-17;9!UBERON:0000125;6.39e-17;9!UBERON:0002308;6.39e-17;9!UBERON:0000200;3.05e-16;6!UBERON:0002037;1.43e-15;6!UBERON:0007023;7.40e-15;114!UBERON:0002298;1.17e-14;6!UBERON:0001872;2.61e-13;5!UBERON:0000349;5.35e-13;5!UBERON:0009663;7.08e-13;7!UBERON:0000369;3.20e-11;4!UBERON:0002435;3.20e-11;4!UBERON:0000204;3.20e-11;4!UBERON:0011216;6.35e-11;132!UBERON:0001871;3.13e-09;6!UBERON:0002021;3.46e-09;5!UBERON:0001870;6.19e-09;3!UBERON:0005383;1.01e-08;3!UBERON:0005382;1.01e-08;3!UBERON:0010314;1.72e-08;132!UBERON:0001894;1.97e-08;7!UBERON:0000988;2.39e-08;3!UBERON:0001896;5.46e-08;3!UBERON:0005290;5.46e-08;3!UBERON:0001778;1.15e-07;3!UBERON:0001775;1.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.53e-97,56;UBERON:0005068,3.53e-97,56;UBERON:0006241,3.53e-97,56;UBERON:0007135,3.53e-97,56;UBERON:0000073,1.22e-94,53;UBERON:0002616,1.22e-94,53;UBERON:0001017,5.83e-81,81;UBERON:0000955,3.54e-80,68;UBERON:0006238,3.54e-80,68;UBERON:0003075,1.18e-73,82;UBERON:0007284,1.18e-73,82;UBERON:0001016,1.50e-71,89;UBERON:0002346,1.37e-69,86;UBERON:0002780,1.18e-66,41;UBERON:0001890,1.18e-66,41;UBERON:0003080,1.18e-66,41;UBERON:0006240,1.18e-66,41;UBERON:0001893,8.91e-60,34;UBERON:0001869,1.13e-59,32;UBERON:0003528,2.86e-59,34;UBERON:0002020,2.86e-59,34;UBERON:0010371,1.67e-57,104;UBERON:0002791,4.24e-55,32;UBERON:0003056,1.95e-52,61;UBERON:0007023,9.73e-48,114;UBERON:0010314,4.30e-46,132;UBERON:0000956,1.70e-43,25;UBERON:0000203,1.70e-43,25;UBERON:0002619,8.02e-42,22;UBERON:0004121,1.36e-39,171;UBERON:0000924,1.36e-39,171;UBERON:0006601,1.36e-39,171;UBERON:0001950,2.33e-37,20;UBERON:0003076,2.63e-30,15;UBERON:0003057,2.63e-30,15;UBERON:0004733,1.61e-28,12;UBERON:0002028,1.61e-28,12;UBERON:0007277,1.61e-28,12;UBERON:0011216,8.01e-28,223;UBERON:0004732,4.36e-26,13;UBERON:0002680,2.91e-22,9;UBERON:0001895,2.91e-22,9;UBERON:0010092,2.91e-22,9;UBERON:0000025,4.60e-19,192;UBERON:0002420,3.50e-17,9;UBERON:0007245,3.50e-17,9;UBERON:0010009,3.50e-17,9;UBERON:0010011,3.50e-17,9;UBERON:0000454,3.50e-17,9;UBERON:0000125,7.14e-17,9;UBERON:0002308,7.14e-17,9;UBERON:0000200,2.98e-16,6;UBERON:0002037,1.18e-15,6;UBERON:0006215,1.18e-15,6;UBERON:0002298,1.45e-14,6;UBERON:0000483,9.38e-14,306;UBERON:0004111,1.74e-13,240;UBERON:0000119,1.76e-13,309;UBERON:0001872,2.37e-13,5;UBERON:0000349,5.04e-13,5;UBERON:0009663,7.32e-13,7;UBERON:0000369,3.24e-11,4;UBERON:0002435,3.24e-11,4;UBERON:0000204,3.24e-11,4;UBERON:0010082,3.24e-11,4;UBERON:0001871,2.85e-09,6;UBERON:0002021,3.23e-09,5;UBERON:0001870,6.12e-09,3;UBERON:0005383,1.03e-08,3;UBERON:0005382,1.03e-08,3;UBERON:0001894,1.72e-08,7;UBERON:0006222,1.72e-08,7;UBERON:0000923,2.23e-08,560;UBERON:0010316,2.23e-08,560;UBERON:0005291,2.23e-08,560;UBERON:0006598,2.23e-08,560;UBERON:0010317,2.23e-08,560;UBERON:0002532,2.23e-08,560;UBERON:0000988,2.61e-08,3;UBERON:0002050,3.40e-08,564;UBERON:0001896,6.18e-08,3;UBERON:0005290,6.18e-08,3;UBERON:0010096,6.18e-08,3;UBERON:0001778,1.24e-07,3;UBERON:0001775,1.24e-07,3;UBERON:0000922,1.73e-07,592;UBERON:0005423,1.92e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,2.08948502559871,0,0,0,0,0,0,0,0,0,0,4.062994916534,2.85600967741954,2.5076377718247,1.43117993565528,1.09499540058307,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02511414925017,1.55210578223795,2.19586964232815,2.48860243445654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0,0.895304816199478,0,0,0,0,0,3.90419561572865,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,1.50473049863859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0,0,0,0,0.145016693914229,0.170453254832202,1.69160867728801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,3.97659059106519,4.07941307590487,0,0,1.47787785689595,0.796991953004279,0,0,0,0,0.622079175323615,0,0,0,0.295930216910801,0,0,5.81599647657131,18.2753153378847,1.99613798001194,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,11.5146380155799,7.95936494927692,28.9905299002458,29.3035038817745,35.7612618933792,10.5304990633907,0,0.139423744278603,2.46240827212151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0,0,2.6286441862464,1.60515529459758,18.2726267665765,0,0,0,0,0,0.61214552326098,3.91756793696625,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,1.35588444468319,0,0,16.2708745606608,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,1.50595916781192,0,0,0,0.837847203816763,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0.0846733320657845,9.54275627771164,3.54128855890097,0,0,0,0,0,17.7388705441432,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.36912851260838,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0631590594388,9.88412745705902,11.8931384171175,1.14681839138014,4.10437490686353,8.13462878532123,0,0,0,0,0,0,2.46365748638403,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.67809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,21.0029566065423,25.5053837386053,9.89729926154338,18.6655891459087,0,27.1096429659734,6.13607453401034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1740178169077,9.37293718336617,13.0212681795746,30.9469153746265,1.64092442705466,0.548257766857182,2.97726707033577,0,0,1.60710550763486,0,0.606965604236632,1.82129753081038,0,0.115233987555779,0,41.2576279169368,28.348065405588,0,0,0.235479278551542,11.7836692437001,0,3.65263488203798,0,0,1.00067161847319,0,0.116241425368125,0,0,0,0.3414369541879,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,9.82545746540844,0,0,0,0,0.452888530700021,0.385870790539723,0.437119121007915,0,0.490296643507811,0,2.1593931382644,0.594092800654172,6.339835913751,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,1.37618785021362,0.143339583151451,0,15.162102312574,0.436350690340377,1.0580536810308,0,0,0,0.126166424835079,0,2.53397002022874,0,0,0,0,0,0,3.31667775783512,2.1720929130998,1.27940389140589,0.952257725854961,1.0334225573761,0.806971285846153,0,0.318235791390825,1.0105859447911,0.217716747896961,0.342233301085281,0.134704106029175,0.143444410785353,2.32862249582209,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,2.24397944612263 | |||
|short_description=p1@KCNA1 | |||
}} |
Revision as of 11:35, 11 January 2014
Short description: | p1@KCNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000382545, NM_000217, uc001qnh.2_5end |
EntrezGene: | KCNA1 |
HGNC: | 6218 |
UniProt: | Q09470 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.55e-08 | 7 |
macroglial cell | 3.55e-08 | 7 |
astrocyte | 3.55e-08 | 7 |
oligodendrocyte precursor cell | 3.55e-08 | 7 |
astrocyte of the cerebellum | 5.34e-08 | 3 |
ciliated cell | 1.24e-07 | 3 |
ciliated epithelial cell | 1.24e-07 | 3 |
multi-ciliated epithelial cell | 1.24e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.24e-07 | 3 |