FFCP PHASE1:Hg19::chr12:1929421..1929441,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=654429 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32443 | |||
|TSSclassifier=strong | |||
|UniProt=A7E2U6,Q8N967 | |||
|association_with_transcript=0bp_to_ENST00000543818,NM_001039029,NM_001163925,NM_001163926,uc001qjt.2,uc001qju.2,uc001qjv.2,uc010sdx.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_LRTM2_5end | |||
|id=chr12:1929421..1929441,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.73e-14;2!UBERON:0006601;5.96e-14;82!UBERON:0006222;8.55e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.11e-87!57;UBERON:0005068!4.11e-87!57;UBERON:0006241!4.11e-87!57;UBERON:0007135!4.11e-87!57;UBERON:0002780!1.75e-86!41;UBERON:0001890!1.75e-86!41;UBERON:0006240!1.75e-86!41;UBERON:0001893!4.50e-85!34;UBERON:0001869!2.60e-84!32;UBERON:0003080!2.70e-84!42;UBERON:0002791!2.03e-81!33;UBERON:0001017!5.56e-80!82;UBERON:0002616!2.81e-79!59;UBERON:0002020!6.94e-79!34;UBERON:0003528!6.94e-79!34;UBERON:0000955!2.46e-78!69;UBERON:0006238!2.46e-78!69;UBERON:0005743!6.31e-76!86;UBERON:0000073!5.05e-68!94;UBERON:0001016!5.05e-68!94;UBERON:0002619!4.56e-66!22;UBERON:0003075!7.36e-62!86;UBERON:0007284!7.36e-62!86;UBERON:0002346!9.45e-59!90;UBERON:0001950!1.20e-58!20;UBERON:0000956!7.41e-58!25;UBERON:0000203!7.41e-58!25;UBERON:0003056!4.04e-56!61;UBERON:0007023!1.52e-47!115;UBERON:0000033!3.88e-43!123;UBERON:0000153!9.52e-41!129;UBERON:0007811!9.52e-41!129;UBERON:0004121!3.69e-36!169;UBERON:0000924!4.02e-35!173;UBERON:0006601!4.02e-35!173;UBERON:0002420!6.88e-29!9;UBERON:0007245!6.88e-29!9;UBERON:0010009!6.88e-29!9;UBERON:0010011!6.88e-29!9;UBERON:0000454!6.88e-29!9;UBERON:0000200!4.67e-24!6;UBERON:0001871!8.68e-24!7;UBERON:0002308!6.96e-22!9;UBERON:0000125!6.96e-22!9;UBERON:0009663!2.17e-21!7;UBERON:0000025!3.02e-21!194;UBERON:0000349!1.03e-20!5;UBERON:0001872!8.63e-20!5;UBERON:0000369!9.39e-18!4;UBERON:0002435!9.39e-18!4;UBERON:0000204!9.39e-18!4;UBERON:0010082!9.39e-18!4;UBERON:0004111!1.98e-15!241;UBERON:0005383!8.63e-14!3;UBERON:0005382!8.63e-14!3;UBERON:0000483!9.89e-13!309;UBERON:0000477!1.32e-12!286;UBERON:0000119!1.60e-12!312;UBERON:0002771!1.76e-12!3;UBERON:0001896!1.02e-11!3;UBERON:0005290!1.02e-11!3;UBERON:0010096!1.02e-11!3;UBERON:0002298!1.42e-11!8;UBERON:0000064!3.15e-11!219;UBERON:0000475!4.84e-11!365;UBERON:0001873!1.01e-09!2;UBERON:0010122!1.01e-09!2;UBERON:0001870!1.15e-09!2;UBERON:0001876!2.43e-09!2;UBERON:0001897!3.65e-09!2;UBERON:0001954!3.96e-09!2;UBERON:0003022!3.96e-09!2;UBERON:0002421!3.96e-09!2;UBERON:0002600!3.96e-09!2;UBERON:0001875!4.66e-09!2;UBERON:0006514!4.66e-09!2;UBERON:0002360!1.12e-08!2;UBERON:0000094!1.12e-08!2;UBERON:0007645!1.12e-08!2;UBERON:0003076!1.71e-08!15;UBERON:0003057!1.71e-08!15;UBERON:0002021!3.37e-08!5;UBERON:0004733!1.24e-07!12;UBERON:0002028!1.24e-07!12;UBERON:0007277!1.24e-07!12;UBERON:0004732!5.02e-07!13;UBERON:0000062!6.61e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.99e-73;32!UBERON:0001893;3.90e-68;34!UBERON:0002791;2.48e-67;32!UBERON:0003528;3.47e-62;34!UBERON:0002020;3.47e-62;34!UBERON:0002619;1.52e-58;22!UBERON:0001950;6.92e-56;20!UBERON:0000956;1.91e-51;25!UBERON:0000203;1.91e-51;25!UBERON:0002780;1.50e-50;41!UBERON:0001890;1.50e-50;41!UBERON:0002420;1.89e-34;9!UBERON:0007245;1.89e-34;9!UBERON:0010009;1.89e-34;9!UBERON:0010011;1.89e-34;9!UBERON:0000454;1.89e-34;9!UBERON:0000073;3.26e-33;53!UBERON:0002616;3.26e-33;53!UBERON:0001017;1.88e-30;75!UBERON:0000955;3.53e-30;68!UBERON:0000369;1.61e-26;4!UBERON:0002435;1.61e-26;4!UBERON:0000204;1.61e-26;4!UBERON:0009663;2.27e-23;7!UBERON:0001871;4.34e-22;6!UBERON:0000349;1.45e-20;5!UBERON:0005383;1.81e-20;3!UBERON:0005382;1.81e-20;3!UBERON:0001016;6.94e-20;83!UBERON:0000125;3.85e-18;9!UBERON:0002308;3.85e-18;9!UBERON:0000200;2.30e-17;6!UBERON:0001873;3.73e-14;2!UBERON:0001876;1.58e-13;2!UBERON:0007023;1.93e-13;114!UBERON:0002021;4.32e-12;5!UBERON:0001872;9.30e-12;5!UBERON:0011216;9.06e-10;132!UBERON:0001870;9.32e-10;3!UBERON:0001874;4.72e-08;1!UBERON:0002902;5.39e-08;1!UBERON:0009899;5.39e-08;1!UBERON:0002581;8.55e-08;1!UBERON:0001882;8.55e-08;1!UBERON:0002022;8.55e-08;1!UBERON:0005403;8.55e-08;1!UBERON:0003112;2.04e-07;1!UBERON:0011158;2.04e-07;1!UBERON:0007190;2.04e-07;1!UBERON:0003128;2.04e-07;1!UBERON:0001703;2.04e-07;1!UBERON:0002241;2.04e-07;1 | |||
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|short_description=p3@LRTM2 | |||
}} |
Revision as of 11:28, 11 January 2014
Short description: | p3@LRTM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRTM2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000543818, NM_001039029, NM_001163925, NM_001163926, uc001qjt.2, uc001qju.2, uc001qjv.2, uc010sdx.1_5end |
EntrezGene: | LRTM2 |
HGNC: | 32443 |
UniProt: | A7E2U6Q8N967 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data