FFCP PHASE1:Hg19::chr11:118901559..118901621,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2542 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4061 | |||
|TSSclassifier=strong | |||
|UniProt=O43826,A8K0S7,B4DUH2 | |||
|association_with_transcript=0bp_to_ENST00000330775,ENST00000357590,ENST00000456881,ENST00000525039,ENST00000525102,ENST00000527992,ENST00000530407,ENST00000532085,ENST00000538950,ENST00000545985,NM_001164277,NM_001164278,NM_001164279,NM_001467,uc001pus.2,uc010ryr.1,uc010rys.1,uc010ryt.1_5end | |||
|description=CAGE_peak_1_at_SLC37A4_5end | |||
|id=chr11:118901559..118901621,- | |||
|ontology_enrichment_celltype=CL:0000066!5.88e-14!254;CL:1000497!4.98e-07!18;CL:0002518!4.98e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;5.40e-08;17!CL:0002518;5.40e-08;17!CL:1000449;4.62e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.15e-14,253;CL:1000497,5.25e-08,17;CL:0002518,5.25e-08,17;CL:1000449,4.57e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.09e-13!235;DOID:14566!1.62e-12!239;DOID:2531!7.91e-12!51;DOID:0060083!7.91e-12!51;DOID:1240!1.52e-11!39;DOID:8692!4.56e-10!31;DOID:0050686!1.26e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.04e-09;31!DOID:1240;3.49e-09;39!DOID:2531;3.81e-08;51!DOID:0060083;3.81e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.49e-13,235;DOID:14566,1.78e-12,239;DOID:2531,7.37e-12,51;DOID:0060083,7.37e-12,51;DOID:1240,1.49e-11,39;DOID:8692,4.54e-10,31;DOID:0050686,1.30e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0002113!3.56e-09!27;UBERON:0003918!3.56e-09!27;UBERON:0005095!3.56e-09!27;UBERON:0007687!3.56e-09!27;UBERON:0005172!1.19e-08!55;UBERON:0005173!1.19e-08!55;UBERON:0000489!1.01e-07!32;UBERON:0005177!3.39e-07!107;UBERON:0004876!5.82e-07!20;UBERON:0000080!5.90e-07!18;UBERON:0002120!5.90e-07!18;UBERON:0004875!5.90e-07!18;UBERON:0005721!5.90e-07!18;UBERON:0005754!5.90e-07!18;UBERON:0007297!5.90e-07!18;UBERON:0006554!7.59e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;3.90e-09;24!UBERON:0011143;3.90e-09;24!UBERON:0006554;1.06e-08;30!UBERON:0001008;1.06e-08;30!UBERON:0000489;1.94e-07;29!UBERON:0006555;4.62e-07;15!UBERON:0004819;4.62e-07;15!UBERON:0001285;4.62e-07;15!UBERON:0007684;4.62e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.45e-10,26;UBERON:0003918,4.45e-10,26;UBERON:0011143,4.45e-10,26;UBERON:0005095,4.45e-10,26;UBERON:0007687,4.45e-10,26;UBERON:0005172,3.64e-09,54;UBERON:0005173,3.64e-09,54;UBERON:0006554,1.42e-08,47;UBERON:0000489,1.99e-08,31;UBERON:0001008,2.24e-08,48;UBERON:0005177,4.96e-08,101;UBERON:0006555,1.87e-07,16;UBERON:0004819,1.87e-07,16;UBERON:0004211,4.57e-07,15;UBERON:0009773,4.57e-07,15;UBERON:0001231,4.57e-07,15;UBERON:0001285,4.57e-07,15;UBERON:0007684,4.57e-07,15;UBERON:0004208,4.57e-07,15 | |||
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| |||
|short_description=p1@SLC37A4 | |||
}} |
Revision as of 10:43, 11 January 2014
Short description: | p1@SLC37A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC37A4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000330775, ENST00000357590, ENST00000456881, ENST00000525039, ENST00000525102, ENST00000527992, ENST00000530407, ENST00000532085, ENST00000538950, ENST00000545985, NM_001164277, NM_001164278, NM_001164279, NM_001467, uc001pus.2, uc010ryr.1, uc010rys.1, uc010ryt.1_5end |
EntrezGene: | SLC37A4 |
HGNC: | 4061 |
UniProt: | O43826A8K0S7B4DUH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.15e-14 | 253 |
kidney cell | 5.25e-08 | 17 |
kidney epithelial cell | 5.25e-08 | 17 |
epithelial cell of nephron | 4.57e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
kidney | 4.45e-10 | 26 |
kidney mesenchyme | 4.45e-10 | 26 |
upper urinary tract | 4.45e-10 | 26 |
kidney rudiment | 4.45e-10 | 26 |
kidney field | 4.45e-10 | 26 |
abdomen element | 3.64e-09 | 54 |
abdominal segment element | 3.64e-09 | 54 |
urinary system structure | 1.42e-08 | 47 |
cavitated compound organ | 1.99e-08 | 31 |
renal system | 2.24e-08 | 48 |
trunk region element | 4.96e-08 | 101 |
excretory tube | 1.87e-07 | 16 |
kidney epithelium | 1.87e-07 | 16 |
nephron epithelium | 4.57e-07 | 15 |
renal tubule | 4.57e-07 | 15 |
nephron tubule | 4.57e-07 | 15 |
nephron | 4.57e-07 | 15 |
uriniferous tubule | 4.57e-07 | 15 |
nephrogenic mesenchyme | 4.57e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.49e-13 | 235 |
disease of cellular proliferation | 1.78e-12 | 239 |
hematologic cancer | 7.37e-12 | 51 |
immune system cancer | 7.37e-12 | 51 |
leukemia | 1.49e-11 | 39 |
myeloid leukemia | 4.54e-10 | 31 |
organ system cancer | 1.30e-08 | 137 |