FFCP PHASE1:Hg19::chr11:68080047..68080067,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4041 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6697 | |||
|TSSclassifier=strong | |||
|UniProt=O75197 | |||
|association_with_transcript=-9bp_to_ENST00000294304_5end | |||
|description=CAGE_peak_2_at_LRP5_5end | |||
|id=chr11:68080047..68080067,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.76e-15!254;CL:0002321!4.80e-08!248;CL:0000220!4.83e-08!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.70e-13,253;CL:0002321,6.02e-07,250 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.99e-09;30!UBERON:0003104;4.75e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!8.20e-10!143;DOID:305!4.88e-09!106;DOID:162!7.37e-09!235;DOID:14566!4.70e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.58e-09,143;DOID:305,1.38e-08,106;DOID:162,4.59e-08,235;DOID:14566,2.50e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004921!5.98e-20!129;UBERON:0004185!5.98e-20!129;UBERON:0001007!2.02e-18!155;UBERON:0001555!2.02e-18!155;UBERON:0007026!2.02e-18!155;UBERON:0004119!5.49e-17!169;UBERON:0000925!5.49e-17!169;UBERON:0006595!5.49e-17!169;UBERON:0005177!1.92e-16!107;UBERON:0003104!3.99e-16!238;UBERON:0009142!3.99e-16!238;UBERON:0000077!6.81e-16!130;UBERON:0000481!1.14e-13!347;UBERON:0000466!1.19e-13!126;UBERON:0001041!1.33e-13!98;UBERON:0009569!2.66e-13!113;UBERON:0002100!3.62e-12!216;UBERON:0000490!8.07e-12!138;UBERON:0001048!3.45e-10!168;UBERON:0005911!4.67e-10!82;UBERON:0003914!1.52e-09!118;UBERON:0009497!4.81e-09!25;UBERON:0000015!4.81e-09!25;UBERON:0002423!4.81e-09!25;UBERON:0006235!4.81e-09!25;UBERON:0004161!4.81e-09!25;UBERON:0005172!1.01e-08!55;UBERON:0005173!1.01e-08!55;UBERON:0007499!1.51e-08!25;UBERON:0002417!1.88e-08!61;UBERON:0000916!1.88e-08!61;UBERON:0000063!2.26e-08!97;UBERON:0008835!2.80e-08!22;UBERON:0003894!2.80e-08!22;UBERON:0009856!4.03e-08!26;UBERON:0000483!4.32e-08!309;UBERON:0003929!4.53e-08!54;UBERON:0000464!5.07e-08!104;UBERON:0005181!5.12e-08!35;UBERON:0000119!5.75e-08!312;UBERON:0009854!8.03e-08!23;UBERON:0005178!1.14e-07!34;UBERON:0002224!1.14e-07!34;UBERON:0000477!1.22e-07!286;UBERON:0002107!3.31e-07!19;UBERON:0006925!3.31e-07!19;UBERON:0008836!3.31e-07!19;UBERON:0000160!3.85e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.79e-09;25!UBERON:0002107;3.98e-07;19!UBERON:0006925;3.98e-07;19!UBERON:0005181;4.09e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.42e-18,118;UBERON:0005177,1.29e-16,101;UBERON:0001007,3.33e-16,145;UBERON:0001555,3.33e-16,145;UBERON:0007026,3.33e-16,145;UBERON:0004119,3.59e-14,160;UBERON:0000925,3.59e-14,160;UBERON:0006595,3.59e-14,160;UBERON:0002100,5.85e-13,199;UBERON:0009569,1.87e-12,112;UBERON:0001041,6.75e-12,87;UBERON:0003104,3.91e-10,160;UBERON:0009142,3.91e-10,160;UBERON:0005911,2.79e-09,82;UBERON:0009497,4.04e-09,25;UBERON:0000015,4.04e-09,25;UBERON:0002423,4.04e-09,25;UBERON:0006235,4.04e-09,25;UBERON:0004161,4.04e-09,25;UBERON:0000490,4.69e-09,148;UBERON:0003914,8.49e-09,117;UBERON:0005172,9.28e-09,54;UBERON:0005173,9.28e-09,54;UBERON:0007499,1.31e-08,25;UBERON:0001048,1.43e-08,160;UBERON:0008835,2.58e-08,22;UBERON:0003894,2.58e-08,22;UBERON:0002417,2.66e-08,60;UBERON:0000916,2.66e-08,60;UBERON:0009856,3.56e-08,26;UBERON:0009854,7.52e-08,23;UBERON:0003929,8.45e-08,54;UBERON:0005181,1.23e-07,35;UBERON:0005178,2.79e-07,34;UBERON:0002224,2.79e-07,34;UBERON:0002107,3.43e-07,19;UBERON:0006925,3.43e-07,19;UBERON:0008836,3.43e-07,19 | |||
|phase1_expression=1.63510541343501,1.49870366723688,1.83240725324762,2.00146596706261,0.893922188854576,0.872338524100369,0,1.26343974685366,6.00726944859629,2.21160542851358,5.58240934377942,1.09220686065086,1.31883489114227,1.8564952944007,2.65117900582333,2.6893005858071,2.41077811209591,1.46062018077475,0.975865597581014,1.10808952269109,2.85600967741954,4.38836610069323,1.71741592278634,1.64249310087461,4.3939923858181,1.14620108621927,1.14940825229924,1.41679406364623,0,0,0.619264493264304,0.919421224478927,3.0120591877825,2.58827807116751,0,0,2.93600439334847,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0.575384784644301,0.256160706529101,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,1.77901850772711,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0,0,0,0,1.31692042387539,0.393419540227666,0,0,0.83593247695339,0.651844533267181,0.473447805734733,0,0.557052284425868,0,0,0,0.768547918354051,1.30059347559878,3.4531959966772,3.31620021343018,2.31842468588042,0.296573126324121,0,0,1.47302145506836,0.383220493601921,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0.289648807765598,0,3.35350429851818,4.09160197899297,2.53007406669196,2.50668955317945,3.33146993609895,0,5.35298357332899,1.32348744029695,1.77383517970051,2.3715392137144,2.61958150995425,3.27865759463288,1.11235332835329,0.649094787309367,0.174129737299267,0.132957960518865,2.8618874916641,1.14398982156026,0.371457501329565,4.96906018416763,0.860234595106124,2.42998351125316,3.39184765154406,3.77549492588915,1.37559020970034,3.34391946458897,1.29208379584664,1.42306505074684,0.66944122552934,1.61131726843659,3.04108842287405,10.7387305321195,1.83831540172934,1.62028389576352,4.10778750106767,3.81699933464489,3.15312145353302,6.13266549863533,2.84779697870439,4.946447086121,0,0,3.05265836499774,1.49091585508596,1.51956613997496,1.05927344650575,1.72101972449288,0.709336764396714,1.68203280042692,3.20246987189115,1.97334038733728,2.48968828319813,2.02066008104532,1.47115712802113,1.81628913173918,6.91411109375999,1.40592859100278,0.312160076830321,0,0.298897361103602,1.40921398372518,0.809364721840658,0.140450806702248,0.61246251376468,0.61417158655884,2.16984140469107,1.18800285728205,2.47266929278557,0,1.43723628363248,0.505008341862199,1.37630371859161,0.277064115484183,0.877955241761676,2.45190236639216,3.60571341375832,1.13432183160021,0.358779271377724,2.98980344345994,0.635795703478686,0.300091096084402,0.618315175430633,0.772921620136887,1.48893485065272,1.0126579934476,0.194874010322397,0.504867548488229,1.38074847963449,0.646584227275248,1.42003837006646,0.806016785821122,0.847802961552438,0.966304265816484,0.818238361772504,0.860413786167011,2.5614478287215,0.927708378250397,2.90484857173796,3.00617059544574,2.52320850875628,1.45990943630332,0,1.28648187638577,0,0.464367928031979,2.88751792667834,1.8929088006375,1.68584690078102,2.6511213287183,2.86764329104224,1.96091499683166,1.42362371466658,1.34831308160164,1.17732879075208,3.07797725557112,2.21446636387394,1.40241773803446,2.8810180793198,2.94017422771084,3.80265104465493,7.86261773342101,10.0434284135839,0.441463099414651,8.36321382093172,3.43135620597051,2.30475599358114,2.24803506515239,2.31216636546751,2.68506490959736,2.6064664424826,3.11980435583874,2.88662684050547,4.05756417412769,2.46558257895225,4.47535988059329,6.48179717607255,6.84914948044554,2.37061319387782,2.57545848628462,0,0,0,0,0.671928512795438,0.425325291727159,0.985143749731331,0.290633938513962,3.4504441124869,0,1.67292024625129,1.4512968087854,1.44119953416961,1.2624243342638,1.14296209725904,1.52795370223311,2.34434894420094,0,1.95372236136315,0.300343057843917,1.42913216315289,0.336393253036082,3.05172048183296,0.95339771567235,1.93907573636667,7.15312891703765,2.535908257668,3.98907174877306,1.04007436911366,1.54324424557285,1.41849132023278,0,3.28849385413739,4.34097284313154,4.11620168390384,1.30294473717494,3.909311436168,3.16780749173372,0.602878754119172,0,1.49959486773086,0,0,0,1.91699884393266,2.29723871668228,0,1.59259437334337,0.410952645100767,1.07436577943937,0,0,0.215627574859517,0,1.27047312111232,5.20559415430487,1.54657762555539,3.18280904135263,0,0,0,0,3.18997878469764,1.50051156317903,1.08506009479894,5.19927153827018,2.49800584316026,3.46945313074656,6.09135357962109,2.40756879782175,2.27407504055985,2.0694614258501,1.99267679560631,3.13427586520895,0.60818530127658,2.54541504701563,3.77457766191941,0.413536052245775,0,0,0.909382714338778,1.66435439510497,2.11673205330776,0.496215615637554,2.30192959932094,1.68396056659844,1.79394808957981,1.53512174720011,2.73451665944133,2.96836132889982,0.462629081407967,1.24293207719189,0.9033987161519,0,1.51073491997947,8.82273982018842,1.60405176242628,1.28913384510255,1.37777337797528,1.45672934405374,2.88473712910733,5.41439535488894,0.924184045252977,7.0591479225917,2.92278449306521,1.37217117560738,2.27466768141793,1.19065593693561,2.80690690932781,1.54227252690289,4.33514300070165,4.51520796469368,3.82314409567557,0,4.92524460388792,0.657779629937804,1.8300481571743,2.05160100093111,2.95213181129735,1.30151357865721,3.60643540767028,1.37354197227515,0.742585499285292,1.14853107599234,1.95018073810956,0,3.67348729510063,1.07834031980251,1.68854042198743,1.24052915236078,1.82614416276065,2.61030049045611,4.43178462563725,3.29418531892928,0.991709492165869,1.34533047155574,2.55225424989168,1.51736671283325,0.464845549297286,1.25924938732256,0.6970372701606,2.15623506123262,1.59691809095107,0,1.11194531462352,0.286249773483982,1.86079184679834,3.79655309662471,3.62197368455267,4.09436466098134,1.71175595213568,0.318203247925937,0.78494864019923,1.07923474549989,2.19629623788844,3.18093486333353,1.41527737101321,4.75530963519025,1.26377536871694,4.8763373908959,0.974853958525138,1.05650146756755,1.50149902548784,4.94919011837995,0,0.551365343546124,0,0.876901770507525,2.89387767133344,4.59126326432643,5.68149055495571,6.196469961995,2.53526042279017,1.72093622644862,3.83171259951173,4.9933947207375,0.709522128141196,1.05553817648832,2.63435914367922,3.41525856389144,5.59895552391973,1.92444225451024,5.3624182042863,2.17781969722645,4.5189024372854,0.86101074534246,0,0.886860307073351,1.60806380144872,0,0,0,0,0,0,0,0,2.13648142254946,0,2.20536194382929,1.11481905075431,0.721346064882224,0.924843963529383,0.797131363644112,2.3949524571938,7.4687094351623,5.08016598537319,1.94773164164733,0.561594356226918,1.14117339516596,3.91699739432558,7.51903431270201,4.23229444504008,3.21176150207399,2.21979677910152,2.55507742614196,1.03051603426729,1.22896305723383,1.3420566473545,1.00109485027145,1.36771666781428,3.34087408674291,2.46174797895425,3.2454681417118,2.33150377598474,5.63948020351398,4.11709188898084,2.63714722689409,3.27673408723686,0.222886768554957,1.42068073403207,0.95497793895076,5.64232893582013,0.921482106297696,0,0.984685914873589,0,0.16480387422676,4.22250816255987,9.76315142430242,1.10513566212459,3.77899121781414,0.613612095012929,1.35393286007176,0,4.58328590851367,3.75944466818779,3.5810065915881,1.7755813014648,0,0,1.93866549219044,0.185536196323703,1.99613798001194,1.5625665665114,1.13697999995054,7.97499532978273,4.66553137970549,13.9839507661021,4.25497827182285,1.72371686620732,3.2076507472158,1.21537496453305,0.885741385813839,0.844175070377856,1.52581736317083,0.221158519862449,0.591095237907095,0.438770794307945,0.653630781113941,2.23077990845765,3.92446318369365,0.91153644677601,2.07507513949254,1.34636466614658,2.49888955420619,0.957003479195758,2.1983422416447,0.533034776018635,0,3.1396051279005,4.82013877510454,2.03036094555463,2.54881294613061,2.3495022176618,1.89753732724185,3.33766815858795,1.05499032264014,1.14262965711403,4.80600442875399,3.24582959613137,5.97157158647103,3.36138745112689,6.72133159426988,0,0,0.208843899010911,1.21322039365219,4.01288823649394,0.234264445725339,2.00700268137233,1.56531695145672,1.94224303627274,3.94584402849391,3.62972148145992,2.14250933141343,3.09614240179591,0.60129367765797,2.59220478493118,1.99396161812156,2.97892760287949,3.13932918407225,4.77889719091835,0.569219092059585,0.970722711091971,1.04135843001079,2.74378712760257,4.87531556850254,2.09672001890436,4.64362287673365,2.51566461351621,1.82723292715464,3.36673373918158,1.74580229679155,4.58931858795801,4.06765333404958,2.32971271899477,1.19228767021794,0.443175571691151,1.36885967914362,6.33254679987116,8.75157278431345,0.39961921916426,15.4176746354893,0.80175617316141,3.43189995723929,0.720273989940749,4.84584888705187,6.59943296927027,1.76675467895698,1.255234155748,2.03996435272644,0.288950589901519,0,0.410716136675979,3.83239764200917,2.57859264851974,0.525774708558629,3.90995361781156,1.83328339209347,5.0251111720377,3.19486400798386,3.43380838509257,4.24025769139558,3.15762320687613,6.48539790376326,2.32991899054908,7.40561913687902,6.26360523696865,6.6729508415643,3.24810688998671,1.86281330544726,0,0.272406812223151,2.08979093004525,3.57602535152808,1.24632101408756,0,0.77380195455795,0.303747783290123,1.0063040627978,2.67939404817274,3.51445740504487,6.65282120072261,3.04788476865836,3.83830394638891,1.42939065274673,3.31045985182716,4.32256514013075,0,2.5926644736038,0,2.39460383124975,2.62696066397885,1.19271615249795,3.5126748371239,9.23279072171919,7.95041333473328,1.16354660725395,0.66116300871345,3.59282359557092,10.5722253347501,2.24253566392159,0.78602152549833,3.31391244277756,1.9846640872478,5.53312569314244,0.243585196761792,0.638341257770182,9.24830265728106,5.5151776684994,4.28883807468846,5.57383472206668,5.81100156125867,0.886068179966986,0.244052529803926,0.3755727921195,2.86704597845036,0.665574309221114,0.807253238237985,3.04366996859708,2.12466693535581,1.06154382279153,0.856396000634902,2.82318983637806,3.74667924645505,2.17381542916238,0.447764408660622,1.40227985908335,0,0.947015026375446,0.754703705257725,0,0.457680136793847,0.453692771289717,0.621748802331122,0.887130899937803,1.11507737014592,0.449803112163605,0.931577741257556,0.414706207840855,0.265841714557995,1.04349012362347,3.00515217994437,1.90402606084398,0,1.63663793282303,1.61115835563733,1.85613503951397,1.59238355479446,0,0.686791410365586,1.01024846629776,0,2.31143796488764,3.64550705337374,1.56596575179127,1.58694147858591,1.85217979459067,1.46842022703881,1.4327107286519,3.70561736593167,1.97355644620836,2.12026975135057,1.15748422962549,2.36519416914302,0.256241518587947,2.41801239211839,0.911579868532147,0.276516872303462,0.389720617678777,2.39156712564054,0.327130788511688,0.655219697692825,1.96618327002975,4.43755459053117,0,0.533458648470704,0,0.567515953566836,0,1.11903606175556,0.622077260032973,2.42999305476938,1.1860729253635,6.29063767423586,6.55257829152083,5.26170842857478,2.76347396132188,2.10690799240304,1.11728983594649,3.4980478571876,3.78536376006016,3.20228299314188,7.05351887381368,2.7562092961788,0.513833800771676,0,0.478901577171454,0.615349092722265,1.26035848110859,0.553258019713743,0.484426936895553,1.42769420259154,1.96295437002051,4.36487976386639,1.10057159113007,3.35024431835981,0,1.3807198521202,2.58591088751157,3.53488543241509,0,10.9411961572633,2.09525355585138,0.982631505060581,3.54854606920909,0.607838261565552,0,0.206686796501184,0.760989722326882,2.18789923607288,3.28954660114309,4.46590060550365,0.527613733078862,9.96546935588843,0,0,0.606965604236632,0.455324382702595,2.30626162422861,0.460935950223117,22.4649292363018,0.475788130837822,0.657727735628491,4.37317211270682,4.89418168325104,3.53218917827313,0.314231179832004,8.96870922604125,3.65263488203798,1.29556554731173,1.43325506366115,2.7875852228896,2.52821778772363,1.74362138052188,12.1700790611806,0.801711364730253,1.86494547746733,1.3657478167516,1.38251932362818,2.15113679410139,0.473328002922261,0.681707238073262,2.9637093513365,1.60374807980835,0.93061915699296,0,2.9082412267426,5.20196238160788,4.3890452993617,1.94228651156368,1.53994210284371,6.95888658802919,3.39997695141398,4.67878926924211,1.59160620129095,18.0758537981904,3.27543637912984,2.74851291863573,4.07599677630019,7.64024165268652,7.43102505713455,2.82190377816914,3.18692818280077,7.54164950725203,0.785233868459781,0.297046400327086,2.9585900930838,2.71883383500507,0.751871343838829,1.61144719933943,1.79894080664872,1.96409332466223,1.41157948686277,1.5245859670942,2.92134555298607,1.83491713361816,0.573358332605805,1.26217249754548,0.951880862672806,1.74540276136151,4.2322147241232,3.71995018166751,2.31087814315709,2.59575937274273,0.252332849670158,0.98339014767326,0.760191006068622,1.93778776509765,0.26721740526556,0.275684698604535,1.0028301571695,0.909344378618873,0.803892390468535,0.829169439458779,0.517164979309476,1.49263787330687,4.76128862927481,3.03567876229229,3.91070700063905,4.03674705290208,2.80047496423926,2.62752345645685,1.95945073107265,6.16019941953506,1.48174516632093,4.01644350198988,4.65724499164419,1.87227517805241,0.640364075266293,3.8614456457388,15.2702843581198,2.34640942403454,1.34465588601153,4.06896178315738,1.33151354837103,2.01273793591026,1.28227396921293 | |||
|short_description=p2@LRP5 | |||
}} |
Revision as of 09:04, 11 January 2014
Short description: | p2@LRP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRP5_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000294304_5end |
EntrezGene: | LRP5 |
HGNC: | 6697 |
UniProt: | O75197 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.70e-13 | 253 |
embryonic cell | 6.02e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.58e-09 | 143 |
carcinoma | 1.38e-08 | 106 |
cancer | 4.59e-08 | 235 |
disease of cellular proliferation | 2.50e-07 | 239 |