FFCP PHASE1:Hg19::chr11:65779425..65779509,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1474 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2478 | |||
|TSSclassifier=strong | |||
|UniProt=Q15828 | |||
|association_with_transcript=0bp_to_NM_001323,uc001ogr.2_5end | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_CST6_5end | |||
|id=chr11:65779425..65779509,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.20e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.49e-08;10!CL:1000494;4.49e-08;10!CL:0000349;8.05e-08;19!CL:1000449;3.31e-07;15!CL:0002368;8.69e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.70e-08,10;CL:1000494,4.70e-08,10;CL:0000349,1.01e-07,19;CL:1000449,2.92e-07,15;CL:0002368,7.92e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.97e-17!659;UBERON:0000467!1.41e-13!625;UBERON:0000480!2.39e-13!626;UBERON:0000062!9.21e-12!511;UBERON:0003102!2.58e-10!95;UBERON:0000922!3.99e-10!612;UBERON:0004923!1.94e-09!57;UBERON:0002050!5.50e-09!605;UBERON:0005423!5.50e-09!605;UBERON:0000923!1.12e-08!604;UBERON:0005291!1.12e-08!604;UBERON:0006598!1.12e-08!604;UBERON:0002532!1.12e-08!604;UBERON:0005631!6.83e-08!14;UBERON:0000158!6.83e-08!14;UBERON:0001444!1.33e-07!48;UBERON:0000475!2.27e-07!365;UBERON:0000080!5.08e-07!18;UBERON:0002120!5.08e-07!18;UBERON:0004875!5.08e-07!18;UBERON:0005721!5.08e-07!18;UBERON:0005754!5.08e-07!18;UBERON:0007297!5.08e-07!18;UBERON:0000058!8.07e-07!26;UBERON:0000926!9.16e-07!448;UBERON:0004120!9.16e-07!448;UBERON:0006603!9.16e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.49e-08;10!UBERON:0009773;4.49e-08;10!UBERON:0001231;4.49e-08;10!UBERON:0004810;4.49e-08;10!UBERON:0006555;3.31e-07;15!UBERON:0004819;3.31e-07;15!UBERON:0001285;3.31e-07;15!UBERON:0007684;3.31e-07;15!UBERON:0004923;3.40e-07;55!UBERON:0000478;4.15e-07;24!UBERON:0005631;8.94e-07;10!UBERON:0000158;8.94e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,3.62e-12,66;UBERON:0003102,4.31e-09,99;UBERON:0005631,1.18e-08,14;UBERON:0000158,1.18e-08,14;UBERON:0004810,4.70e-08,10;UBERON:0004211,2.92e-07,15;UBERON:0009773,2.92e-07,15;UBERON:0001231,2.92e-07,15;UBERON:0001285,2.92e-07,15;UBERON:0007684,2.92e-07,15;UBERON:0004208,2.92e-07,15;UBERON:0006555,3.31e-07,16;UBERON:0004819,3.31e-07,16;UBERON:0000153,3.63e-07,62;UBERON:0007811,3.63e-07,62;UBERON:0006554,3.85e-07,47;UBERON:0000478,5.06e-07,24;UBERON:0000033,6.24e-07,56;UBERON:0001008,8.85e-07,48;UBERON:0001444,9.16e-07,49 | |||
|phase1_expression=1.99846217197612,0.428201047781966,1.69145284915165,10.007329835313,1.34088328328186,6.10636966870258,0,0.631719873426831,0,321.419988943974,524.048677147293,49.3677501014189,84.6692000113336,4.45558870656168,9.27912652038164,0.672325146451775,0,0,0.487932798790507,0.738726348460727,5.71201935483908,0,0,2.87436292653057,1.38096903554283,0,0,0,0.786728553697808,0.383829398097213,26.7831893336811,11.0330546937471,5.72291245678675,5.54631015250181,0,0,0,0.553995408531877,1.00272223735071,0.434021741431704,0,0,0,10.3232749533491,27.2070679455943,36.3876091781724,3.0215774797739,9.04569353648017,4.64559556342655,1.1507695692886,1.5369642391746,2.83778675866302,0.344745680736619,0.645484683583826,2.70852973188684,3.38836211176688,11.4620583024295,12.1350681600346,3.06083892370903,9.30694178520671,6.39337125799041,0.989553900560148,4.78712778291916,2.98357325372886,0.580418477257168,2.8369261234557,5.60540024096017,0.251248665256743,1.5644487552606,1.73751075764093,1.21079900526674,3.68277635987565,2.84816148696796,0.422510572623884,0,0,0.561643155732475,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,20.2405925335357,6.51739283826656,13.3258797443958,10.3387173116643,11.1926020169606,3.78139268656271,8.20398770611487,7.55379156960884,5.6975897841505,4.73583874780305,12.977455497455,1.62273696827342,2.26368658489047,7.71156171009418,0,0,0,0.198762407366705,0,2.08284300964557,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0,0,0.267899184852239,1.57170560838319,1.46394924628319,0,0.949265659568129,0,0,0,10.0301631992783,15.4061305025549,3.29239330327907,0.132409180813219,5.44989579422746,1.77334191099179,3.36406560085384,0,2.4666754841716,0.311211035399766,0.404132016209064,0.653847612453835,0.151357427644931,0.576175924479999,0.468642863667593,0.624320153660641,3.99330275081114,1.04614076386261,0.587172493218824,1.61872944368132,3.08991774744947,1.83738754129404,1.59684612505298,2.16984140469107,2.37600571456411,6.18167323196392,0.910161361938026,5.03032699271367,0.336672227908132,0.625592599359821,0.277064115484183,7.90159717585508,26.0514626429167,5.40857012063748,0.907457465280168,21.3473666469746,17.0845911054854,2.54318281391474,14.7044637081357,5.15262646192194,16.7466351029659,29.964813869386,4.72573730275545,10.6206335625707,13.3789900349381,5.61504381718026,3.07127507955743,31.2408441414621,12.6947643766827,2.54340888465731,74.7919501741959,15.0010366324959,38.4318157821265,2.07355300420312,1.32529768321485,1.16193942869518,2.798848485415,2.52320850875628,0,14.0804579096834,16.0810234548221,6.90674606762403,8.35862270457562,18.7688665234092,0,0,0,0,0.217879444092406,0,0,0,0,1.4763109092493,28.0483547606892,1.6462960453256,5.88034845542168,0,0,0,0,0,2.74508496477641,4.49976170175365,2.24803506515239,0.804231779293047,0.555530670951178,0.651616610620649,2.07986957055916,2.88662684050547,0.115930404975077,3.52226082707465,1.15493158208859,0.462985512576611,1.71228737011138,0,0,0.738651018262192,1.40402559083543,0.743155811443641,15.9347517777521,24.3574085888346,12.1926583628452,1.97028749946266,2.03443756959773,4.21720947081732,19.7065295158377,1.23267807618516,0.207328115540772,0,0.12624243342638,0.253991577168676,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,1.29271715757778,7.15312891703765,0,0.26593811658487,2.08014873822732,20.8337973152335,68.0875833711736,25.5765291855455,0.142977993658148,1.08524321078289,0.823240336780769,0.325736184293735,0,3.95975936466715,0.904318131178758,0.871533458600294,11.6968399683007,2.43247561282381,1.00451418286425,4.21667878966063,5.99062138728957,4.59447743336456,4.27910715122155,15.6363811200986,43.7664567032317,10.9227187576336,0,0.394061520403854,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.613457458595699,25.0085260529839,3.7977103317963,7.07100929204744,9.99202337264106,7.56971592162886,13.0026970641912,2.70851489754947,11.3703752027992,3.10419213877515,3.32112799267718,11.2465192810439,0.60818530127658,9.20265440074881,1.37257369524342,0,0,0.320182673410333,9.09382714338778,91.5394917307734,3.32629322662648,4.21783273291921,5.06424511850606,5.3325417942284,4.22859192543813,18.933168215468,4.82561763430822,19.2943486378488,0.154209693802656,1.59805552781814,0.164254312027618,0,0.464841513839837,0,87.0198081116256,8.74769394891015,0.229628896329213,0,0.262248829918848,233.721399486039,64.1537758079775,25.8835423828362,45.3031596425108,15.6216410761456,0,0.340187410553031,1.72732732881711,10.7959076883203,5.1479823133332,18.5625216326296,88.6969430196733,260.957866803619,41.416829623603,0,0.261435451024901,15.130557381867,116.117184577696,15.6181629438865,6.28550171051106,0,0.082509499920588,2.87132768998086,13.0012049207304,0,0.676695028044854,2.61882649094895,5.2191249406884,13.7836572484531,0.322260734604821,1.16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| |||
|short_description=p1@CST6 | |||
}} |
Revision as of 08:46, 11 January 2014
Short description: | p1@CST6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CST6_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 0bp_to_NM_001323, uc001ogr.2_5end |
EntrezGene: | CST6 |
HGNC: | 2478 |
UniProt: | Q15828 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.70e-08 | 10 |
nephron tubule epithelial cell | 4.70e-08 | 10 |
extraembryonic cell | 1.01e-07 | 19 |
epithelial cell of nephron | 2.92e-07 | 15 |
respiratory epithelial cell | 7.92e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 3.62e-12 | 66 |
surface structure | 4.31e-09 | 99 |
extraembryonic membrane | 1.18e-08 | 14 |
membranous layer | 1.18e-08 | 14 |
nephron tubule epithelium | 4.70e-08 | 10 |
nephron epithelium | 2.92e-07 | 15 |
renal tubule | 2.92e-07 | 15 |
nephron tubule | 2.92e-07 | 15 |
nephron | 2.92e-07 | 15 |
uriniferous tubule | 2.92e-07 | 15 |
nephrogenic mesenchyme | 2.92e-07 | 15 |
excretory tube | 3.31e-07 | 16 |
kidney epithelium | 3.31e-07 | 16 |
anterior region of body | 3.63e-07 | 62 |
craniocervical region | 3.63e-07 | 62 |
urinary system structure | 3.85e-07 | 47 |
extraembryonic structure | 5.06e-07 | 24 |
head | 6.24e-07 | 56 |
renal system | 8.85e-07 | 48 |
subdivision of head | 9.16e-07 | 49 |