FFCP PHASE1:Hg19::chr11:58706944..58706968,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=92292 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30519 | |||
|TSSclassifier=strong | |||
|UniProt=E9PR27 | |||
|association_with_transcript=0bp_to_ENST00000532726_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_GLYATL1_5end | |||
|id=chr11:58706944..58706968,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.97e-12!12;CL:0000417!2.97e-12!12;CL:0000668!2.97e-12!12;CL:0000414!2.97e-12!12;CL:0000412!2.97e-12!12;CL:0000182!2.97e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.79e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.79e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.83e-11;11!UBERON:0009497;1.08e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.24e-20!19;UBERON:0006925!2.24e-20!19;UBERON:0008836!2.24e-20!19;UBERON:0008835!1.30e-17!22;UBERON:0003894!1.30e-17!22;UBERON:0009854!7.50e-17!23;UBERON:0007499!1.65e-15!25;UBERON:0009497!1.65e-15!25;UBERON:0000015!1.65e-15!25;UBERON:0002423!1.65e-15!25;UBERON:0006235!1.65e-15!25;UBERON:0004161!1.65e-15!25;UBERON:0005057!6.48e-15!26;UBERON:0009856!6.48e-15!26;UBERON:0005172!2.94e-13!55;UBERON:0005173!2.94e-13!55;UBERON:0002365!1.62e-12!31;UBERON:0002330!1.62e-12!31;UBERON:0002417!6.54e-12!61;UBERON:0000916!6.54e-12!61;UBERON:0002368!4.35e-11!35;UBERON:0003929!4.96e-10!54;UBERON:0000949!1.28e-08!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.59e-37;19!UBERON:0006925;2.59e-37;19!UBERON:0002423;1.70e-28;25!UBERON:0002365;5.16e-23;31!UBERON:0002330;5.16e-23;31!UBERON:0002368;6.99e-20;33!UBERON:0000949;2.03e-14;43!UBERON:0005172;2.11e-10;52!UBERON:0005173;2.11e-10;52!UBERON:0002417;4.78e-08;58!UBERON:0000916;4.78e-08;58!UBERON:0002530;1.35e-07;57!UBERON:0001007;1.81e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.59e-37,19;UBERON:0006925,2.59e-37,19;UBERON:0008836,2.59e-37,19;UBERON:0008835,2.63e-32,22;UBERON:0003894,2.63e-32,22;UBERON:0009854,6.31e-31,23;UBERON:0007499,1.70e-28,25;UBERON:0009497,1.70e-28,25;UBERON:0000015,1.70e-28,25;UBERON:0002423,1.70e-28,25;UBERON:0006235,1.70e-28,25;UBERON:0004161,1.70e-28,25;UBERON:0009856,2.02e-27,26;UBERON:0002365,4.41e-23,31;UBERON:0002330,4.41e-23,31;UBERON:0002368,1.68e-20,35;UBERON:0000949,4.83e-16,45;UBERON:0003929,1.96e-13,54;UBERON:0005172,1.96e-13,54;UBERON:0005173,1.96e-13,54;UBERON:0002530,2.51e-12,59;UBERON:0002417,3.98e-12,60;UBERON:0000916,3.98e-12,60;UBERON:0005911,5.90e-09,82;UBERON:0001041,1.87e-08,87;UBERON:0005177,2.57e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,228.159062679296,88.4544495009863,108.705342829378,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,122.000557790903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,116.738312963206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,162.526427148993,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@GLYATL1 | |||
}} |
Revision as of 07:49, 11 January 2014
Short description: | p1@GLYATL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_GLYATL1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000532726_5end |
EntrezGene: | GLYATL1 |
HGNC: | 30519 |
UniProt: | E9PR27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.79e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.59e-37 | 19 |
digestive gland | 2.59e-37 | 19 |
liver bud | 2.59e-37 | 19 |
hepatic diverticulum | 2.63e-32 | 22 |
liver primordium | 2.63e-32 | 22 |
digestive tract diverticulum | 6.31e-31 | 23 |
epithelial sac | 1.70e-28 | 25 |
epithelium of foregut-midgut junction | 1.70e-28 | 25 |
anatomical boundary | 1.70e-28 | 25 |
hepatobiliary system | 1.70e-28 | 25 |
foregut-midgut junction | 1.70e-28 | 25 |
septum transversum | 1.70e-28 | 25 |
sac | 2.02e-27 | 26 |
exocrine gland | 4.41e-23 | 31 |
exocrine system | 4.41e-23 | 31 |
endocrine gland | 1.68e-20 | 35 |
endocrine system | 4.83e-16 | 45 |
gut epithelium | 1.96e-13 | 54 |
abdomen element | 1.96e-13 | 54 |
abdominal segment element | 1.96e-13 | 54 |
gland | 2.51e-12 | 59 |
abdominal segment of trunk | 3.98e-12 | 60 |
abdomen | 3.98e-12 | 60 |
endo-epithelium | 5.90e-09 | 82 |
foregut | 1.87e-08 | 87 |
trunk region element | 2.57e-07 | 101 |