FFCP PHASE1:Hg19::chr11:22696383..22696399,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4167 | |||
|TSSclassifier=strong | |||
|UniProt=O43903,E9PRR5 | |||
|association_with_transcript=64bp_to_ENST00000433790,ENST00000532398,NM_005256,uc001mqo.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_GAS2_5end | |||
|id=chr11:22696383..22696399,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.88e-23!12;CL:0000417!5.88e-23!12;CL:0000668!5.88e-23!12;CL:0000414!5.88e-23!12;CL:0000412!5.88e-23!12;CL:0000182!5.88e-23!12;CL:0000223!6.14e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.12e-35;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.89e-35,12;CL:0000223,2.77e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.92e-26;11!UBERON:0009497;2.19e-22;13!UBERON:0001041;1.10e-09;30!UBERON:0003104;2.30e-09;31!CL:0000223;3.41e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!9.03e-26!25;UBERON:0000015!9.03e-26!25;UBERON:0002423!9.03e-26!25;UBERON:0006235!9.03e-26!25;UBERON:0004161!9.03e-26!25;UBERON:0008835!1.47e-24!22;UBERON:0003894!1.47e-24!22;UBERON:0009854!2.07e-23!23;UBERON:0002107!2.20e-23!19;UBERON:0006925!2.20e-23!19;UBERON:0008836!2.20e-23!19;UBERON:0007499!2.17e-21!25;UBERON:0009856!1.70e-20!26;UBERON:0003929!1.77e-20!54;UBERON:0005057!2.24e-20!26;UBERON:0004921!4.16e-16!129;UBERON:0004185!4.16e-16!129;UBERON:0000949!6.13e-16!45;UBERON:0005172!8.91e-15!55;UBERON:0005173!8.91e-15!55;UBERON:0002368!1.16e-14!35;UBERON:0005911!2.97e-14!82;UBERON:0001007!4.88e-14!155;UBERON:0001555!4.88e-14!155;UBERON:0007026!4.88e-14!155;UBERON:0002365!9.92e-14!31;UBERON:0002330!9.92e-14!31;UBERON:0005177!4.59e-13!107;UBERON:0002417!4.61e-13!61;UBERON:0000916!4.61e-13!61;UBERON:0000077!6.28e-13!130;UBERON:0004119!1.76e-12!169;UBERON:0000925!1.76e-12!169;UBERON:0006595!1.76e-12!169;UBERON:0001041!2.72e-11!98;UBERON:0002530!1.10e-09!59;UBERON:0009569!2.68e-09!113;UBERON:0000466!2.92e-09!126;UBERON:0003104!1.62e-07!238;UBERON:0009142!1.62e-07!238;UBERON:0002100!6.07e-07!216;UBERON:0000996!6.38e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.18e-38;19!UBERON:0006925;1.18e-38;19!UBERON:0002423;3.25e-29;25!UBERON:0002365;1.50e-22;31!UBERON:0002330;1.50e-22;31!UBERON:0002368;6.83e-20;33!UBERON:0000949;2.00e-17;43!UBERON:0005172;8.69e-09;52!UBERON:0005173;8.69e-09;52!UBERON:0002417;9.33e-08;58!UBERON:0000916;9.33e-08;58!UBERON:0002530;1.20e-07;57!UBERON:0001007;4.44e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.15e-38,19;UBERON:0006925,1.15e-38,19;UBERON:0008836,1.15e-38,19;UBERON:0008835,2.66e-33,22;UBERON:0003894,2.66e-33,22;UBERON:0009854,7.98e-32,23;UBERON:0007499,3.19e-29,25;UBERON:0009497,3.19e-29,25;UBERON:0000015,3.19e-29,25;UBERON:0002423,3.19e-29,25;UBERON:0006235,3.19e-29,25;UBERON:0004161,3.19e-29,25;UBERON:0009856,4.52e-28,26;UBERON:0002365,2.00e-23,31;UBERON:0002330,2.00e-23,31;UBERON:0002368,1.16e-20,35;UBERON:0000949,4.92e-20,45;UBERON:0003929,1.61e-16,54;UBERON:0005172,4.15e-13,54;UBERON:0005173,4.15e-13,54;UBERON:0002530,6.32e-12,59;UBERON:0002417,1.03e-11,60;UBERON:0000916,1.03e-11,60;UBERON:0005911,1.62e-10,82;UBERON:0005177,2.46e-08,101;UBERON:0001041,8.34e-08,87;UBERON:0004921,6.69e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87720651731561,7.55325422939501,7.08397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2808055714929,4.91413608338813,15.9513274803979,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0017669218742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8161585304989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75741138075283,3.21421847686549,3.16796656114669,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,9.23279072171919,5.30027555648885,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p4@GAS2 | |||
}} |
Revision as of 06:58, 11 January 2014
Short description: | p4@GAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GAS2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 64bp_to_ENST00000433790, ENST00000532398, NM_005256, uc001mqo.2_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | O43903E9PRR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.89e-35 | 12 |
endodermal cell | 2.77e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.15e-38 | 19 |
digestive gland | 1.15e-38 | 19 |
liver bud | 1.15e-38 | 19 |
hepatic diverticulum | 2.66e-33 | 22 |
liver primordium | 2.66e-33 | 22 |
digestive tract diverticulum | 7.98e-32 | 23 |
epithelial sac | 3.19e-29 | 25 |
epithelium of foregut-midgut junction | 3.19e-29 | 25 |
anatomical boundary | 3.19e-29 | 25 |
hepatobiliary system | 3.19e-29 | 25 |
foregut-midgut junction | 3.19e-29 | 25 |
septum transversum | 3.19e-29 | 25 |
sac | 4.52e-28 | 26 |
exocrine gland | 2.00e-23 | 31 |
exocrine system | 2.00e-23 | 31 |
endocrine gland | 1.16e-20 | 35 |
endocrine system | 4.92e-20 | 45 |
gut epithelium | 1.61e-16 | 54 |
abdomen element | 4.15e-13 | 54 |
abdominal segment element | 4.15e-13 | 54 |
gland | 6.32e-12 | 59 |
abdominal segment of trunk | 1.03e-11 | 60 |
abdomen | 1.03e-11 | 60 |
endo-epithelium | 1.62e-10 | 82 |
trunk region element | 2.46e-08 | 101 |
foregut | 8.34e-08 | 87 |
subdivision of digestive tract | 6.69e-07 | 118 |