FFCP PHASE1:Hg19::chr11:20044375..20044414,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89797 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15997 | |||
|TSSclassifier=strong | |||
|UniProt=E9PNV5,E9PLU3 | |||
|association_with_transcript=0bp_to_ENST00000525322,ENST00000530408,uc001mpt.2_5end | |||
|description=CAGE_peak_2_at_NAV2_5end | |||
|id=chr11:20044375..20044414,+ | |||
|ontology_enrichment_celltype=CL:0000223!2.11e-13!59;CL:0000066!6.66e-13!254;CL:0002076!5.25e-11!43;CL:0002368!1.06e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.31e-12;42!CL:0002368;6.46e-10;13!CL:0002251;3.95e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.83e-18,58;CL:0002076,6.43e-15,42;CL:0000066,8.16e-13,253;CL:0002368,6.00e-10,13;CL:0002251,4.06e-08,20 | |||
|ontology_enrichment_development_v019=CL:0000223;1.37e-09;58!UBERON:0006601;2.80e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.72e-25!82;UBERON:0000153!2.69e-24!129;UBERON:0007811!2.69e-24!129;UBERON:0000033!3.12e-24!123;UBERON:0005743!6.50e-24!86;UBERON:0004121!1.37e-22!169;UBERON:0001049!5.04e-22!57;UBERON:0005068!5.04e-22!57;UBERON:0006241!5.04e-22!57;UBERON:0007135!5.04e-22!57;UBERON:0000955!2.27e-21!69;UBERON:0006238!2.27e-21!69;UBERON:0000924!5.05e-21!173;UBERON:0006601!5.05e-21!173;UBERON:0000073!1.04e-20!94;UBERON:0001016!1.04e-20!94;UBERON:0002616!1.67e-19!59;UBERON:0004111!2.77e-19!241;UBERON:0000483!3.43e-19!309;UBERON:0000475!5.50e-19!365;UBERON:0000481!5.68e-19!347;UBERON:0000119!1.06e-18!312;UBERON:0000025!6.57e-18!194;UBERON:0003075!1.12e-17!86;UBERON:0007284!1.12e-17!86;UBERON:0000922!1.74e-17!612;UBERON:0000477!1.44e-16!286;UBERON:0002346!1.09e-15!90;UBERON:0002050!2.78e-15!605;UBERON:0005423!2.78e-15!605;UBERON:0000923!5.18e-15!604;UBERON:0005291!5.18e-15!604;UBERON:0006598!5.18e-15!604;UBERON:0002532!5.18e-15!604;UBERON:0002780!6.41e-15!41;UBERON:0001890!6.41e-15!41;UBERON:0006240!6.41e-15!41;UBERON:0000468!2.61e-14!659;UBERON:0003080!3.53e-14!42;UBERON:0000064!1.02e-13!219;UBERON:0002020!5.13e-13!34;UBERON:0003528!5.13e-13!34;UBERON:0001893!5.99e-13!34;UBERON:0003056!9.73e-13!61;UBERON:0002791!1.51e-12!33;UBERON:0007023!1.73e-12!115;UBERON:0000467!3.08e-12!625;UBERON:0000480!4.55e-12!626;UBERON:0001869!8.36e-12!32;UBERON:0000062!4.27e-11!511;UBERON:0000466!6.47e-10!126;UBERON:0002619!1.21e-09!22;UBERON:0000956!1.49e-09!25;UBERON:0000203!1.49e-09!25;UBERON:0003076!1.94e-09!15;UBERON:0003057!1.94e-09!15;UBERON:0002365!5.05e-09!31;UBERON:0002330!5.05e-09!31;UBERON:0001950!1.59e-08!20;UBERON:0005177!3.56e-08!107;UBERON:0004119!6.30e-08!169;UBERON:0000925!6.30e-08!169;UBERON:0006595!6.30e-08!169;UBERON:0000464!1.65e-07!104;UBERON:0004733!3.42e-07!12;UBERON:0002028!3.42e-07!12;UBERON:0007277!3.42e-07!12;UBERON:0001004!5.96e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.23e-12;53!UBERON:0002616;4.23e-12;53!UBERON:0002365;6.65e-11;31!UBERON:0002330;6.65e-11;31!UBERON:0002619;7.44e-11;22!UBERON:0002780;8.61e-11;41!UBERON:0001890;8.61e-11;41!UBERON:0001893;1.02e-10;34!UBERON:0003528;1.77e-10;34!UBERON:0002020;1.77e-10;34!UBERON:0002791;5.93e-10;32!UBERON:0001017;6.11e-10;75!UBERON:0001869;6.82e-10;32!UBERON:0001950;1.92e-09;20!UBERON:0000956;7.57e-09;25!UBERON:0000203;7.57e-09;25!UBERON:0000955;7.61e-09;68!UBERON:0004733;8.17e-09;12!UBERON:0002028;8.17e-09;12!UBERON:0004732;7.50e-08;13!UBERON:0001016;7.92e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.24e-25,223;UBERON:0001049,5.22e-25,56;UBERON:0005068,5.22e-25,56;UBERON:0006241,5.22e-25,56;UBERON:0007135,5.22e-25,56;UBERON:0001017,7.70e-24,81;UBERON:0000073,2.75e-22,53;UBERON:0002616,2.75e-22,53;UBERON:0000955,8.20e-21,68;UBERON:0006238,8.20e-21,68;UBERON:0004121,1.02e-19,171;UBERON:0000924,1.02e-19,171;UBERON:0006601,1.02e-19,171;UBERON:0001016,2.20e-19,89;UBERON:0010371,5.12e-18,104;UBERON:0003075,2.21e-16,82;UBERON:0007284,2.21e-16,82;UBERON:0004111,2.79e-16,240;UBERON:0002780,3.95e-15,41;UBERON:0001890,3.95e-15,41;UBERON:0003080,3.95e-15,41;UBERON:0006240,3.95e-15,41;UBERON:0000025,4.18e-15,192;UBERON:0002346,8.42e-15,86;UBERON:0007023,4.17e-13,114;UBERON:0000483,8.40e-13,306;UBERON:0003528,1.80e-12,34;UBERON:0002020,1.80e-12,34;UBERON:0001893,2.13e-12,34;UBERON:0000119,2.43e-12,309;UBERON:0000922,3.92e-12,592;UBERON:0003076,9.13e-12,15;UBERON:0003057,9.13e-12,15;UBERON:0002791,3.37e-11,32;UBERON:0002365,4.47e-11,31;UBERON:0002330,4.47e-11,31;UBERON:0001869,4.96e-11,32;UBERON:0005423,6.04e-11,581;UBERON:0002619,6.96e-11,22;UBERON:0003056,3.64e-10,61;UBERON:0010314,7.59e-10,132;UBERON:0001950,1.79e-09,20;UBERON:0000956,7.16e-09,25;UBERON:0000203,7.16e-09,25;UBERON:0004733,7.32e-09,12;UBERON:0002028,7.32e-09,12;UBERON:0007277,7.32e-09,12;UBERON:0002050,3.22e-08,564;UBERON:0004119,4.14e-08,160;UBERON:0000925,4.14e-08,160;UBERON:0006595,4.14e-08,160;UBERON:0004732,6.80e-08,13;UBERON:0002530,3.02e-07,59;UBERON:0000923,4.00e-07,560;UBERON:0010316,4.00e-07,560;UBERON:0005291,4.00e-07,560;UBERON:0006598,4.00e-07,560;UBERON:0010317,4.00e-07,560;UBERON:0002532,4.00e-07,560;UBERON:0001041,4.93e-07,87;UBERON:0005177,7.35e-07,101 | |||
|phase1_expression=0,0,0.986680828671798,0,0.893922188854576,0,0,0,0,2.7030733015166,0.697801167972428,1.74753097704138,5.01157258634062,2.35156070624089,0.662794751455832,5.3786011716142,1.80808358407193,2.19093027116212,1.46379839637152,8.74159512345194,2.04000691244253,5.95563970808367,0.572471974262113,0.547497700291537,0.251085279189606,0,0,0,0,0,0.77408061658038,10.1136334692682,13.5542663450213,24.7735186811748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,23.858578411533,14.5990461090791,0,0.665188192387692,0.263504357079378,4.06035134042909,22.2220125858451,18.9100065820059,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.337834441449967,0,1.89853131913626,0.549605231791222,0,0,15.6993858771312,0,0.379891534993739,0,0.286836620748814,0,1.68203280042692,2.1349799145941,3.94668077467456,0.311211035399766,0.134710672069688,0.163461903113459,0.908144565869588,1.72852777344,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0.612975591598039,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,7.15065156704198,11.1825909442242,6.30970109855808,1.70763188581434,4.37348235460901,2.20768491452085,2.38420426535352,4.54177531576131,8.39447925874409,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0.8231480226628,1.47008711385542,15.2106041786197,16.7080626835196,27.767125614026,0,3.32068784066407,0.686271241194102,14.7065382447558,19.1082980537953,0,19.1658081478156,0.325808305310325,0,0,1.15930404975077,0.939269553886573,0,0,0,3.1608175918371,1.71697232418975,0,0,0,6.56136837907439,18.9819804864711,13.3268591407843,23.643449993552,7.26584846284905,1.15014803749563,0,0,0.621984346622316,0.432359860250884,0,0.126995788584338,0.381988425558278,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0.517086863031111,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,6.35236560556159,2.60279707715243,0,0.502548796003046,0.637938751653163,0,0,0,1.8403723757871,24.5083555319242,1.35632511849868,1.03985430765404,0.713715955188647,0.157702415033935,0.234282829985426,1.20378439891088,2.27407504055985,1.03473071292505,2.65690239414175,0.921845842708516,0,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,11.6504807657348,4.83824469327489,0,0,0,0,0,0,0,0,0,0,0,0,6.04297247958111,8.62177822304125,9.11601790465374,0,0,0.131124414959424,4.06079651616671,3.15762882128101,3.13739907670742,2.92278449306521,4.74982330017941,0,0.340187410553031,4.10240240594065,0,2.70946437543853,2.00675909541941,6.37190682612596,3.3243040357149,3.80587083027703,0,0,0,0,1.30151357865721,4.6368455241475,0.27470839445503,0.082509499920588,18.9507627538737,13.6512651667669,0,0.96670718292122,1.07834031980251,0.921022048356777,0.137836572484531,0.214840489736547,0.725083469571143,0.170453254832202,8.19094727949984,26.2803015423955,25.369088892194,42.7502586856857,26.1998652415874,0,0,0,0.308033580176089,0,0,1.29726953372744,0.143124886741991,0,0.632758849437452,0.571890581771475,0,0.855877976067841,0,1.56989728039846,0.719489830333259,1.37268514868027,0.942499218765491,0,0,0,0.975267478179181,0,1.05650146756755,0,0.707027159768564,0,0,0,1.31535265576129,0,0,0.811641507850816,0.92947049429925,1.12678241012897,0.430234056612155,0.491245205065606,0.7133421029625,0,0,0,0,0.699869440489966,23.0933070541229,9.38423185750102,22.8671068208777,4.80133383961574,0.86101074534246,11.7930032967338,2.21715076768338,3.44585100310439,0,0,0,0,0,0,0,0,3.63201841833409,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,5.96861211844225,5.64232893582013,14.7437137007631,8.94732882989668,6.18945432206256,0,0,0.422250816255987,3.38721580026819,0.276283915531148,66.2583126856746,6.3406583151336,0.123084805461069,0,0,7.51888933637558,0,0.0986434056369336,0,0,4.84666373047609,6.67930306765329,1.99613798001194,0.260427761085233,0.174919999992391,0,4.55173793141999,3.30529745380596,0.236387681767936,0,0,0.347249989866585,4.42870692906919,0.60298219312704,1.52581736317083,3.75969483766164,2.65992857058193,3.07139556015562,2.39664619741778,56.6060401771129,1.23120413606075,0,1.1528195219403,7.62939977483063,2.06430006651815,20.4160742228428,3.84709892287822,42.6427820814908,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,7.83517479163909,7.06765357169704,0,0,0,0,0,0,0,14.6260458568069,0.802577647298789,9.13631338328823,0,8.21791399514777,0,0.789168805698781,1.20990716048664,0.30607276163049,0.31593289814244,0,0.933193722575224,0,0,0,0,0,0.277349346026277,4.16543372004314,1.95984794828755,4.35296032902013,5.2418000472609,0,0.0967563312890851,0.730893170861856,0.164230914106418,5.14041787388623,0,0.90392296312213,0,0,7.15411994301429,0.391102765469606,0,0,0,2.59362750877391,0,3.94668495082519,0,0.124252535565433,19.0912168039604,0.271808412147228,0.104602846312333,0,2.88950589901519,7.80546375322726,6.02383667124769,0,0,1.57732412567589,1.67569440763353,0.458320848023367,0,0.399358000997982,0,0,0.671834724867263,0,25.6291088960398,12.6053091691558,12.1151311820315,15.5028150864625,28.0518322317034,0.0846733320657845,12.7236750369489,11.0324758950376,7.87690427478594,2.20063098555574,5.40072439437941,0,0,6.50020256240864,0,7.32893077882543,21.4014719590792,0.105600336519406,25.1002275065983,8.25235348473615,0,0,0,0,0,0,2.39460383124975,0,0,0,11.5776264605685,34.4517911171775,13.1868615488782,7.53725829933333,13.515860192862,0,0.533937062838473,5.03053776318931,0.414239055347196,0,0,0,17.8735552175651,0,0,0,0,8.48092119751265,2.65820453990096,6.34536577490208,9.13893794157449,21.7895494362227,23.0732427196653,35.3328532736472,1.24513771442608,13.7478448758317,0,0,3.2937214757744,0,0,0.149254802886874,0,0,0,0,0,0,0,0.466311601748341,0,0,0.449803112163605,0.155262956876259,3.31764966272684,0,0,0,0,0,0.181848659202559,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,10.784158019835,0,0.132864840313363,0,0.982829546539238,0,1.47918486351039,0,0,0,0,0,17.62481797265,29.8597084815827,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,35.487785250564,0,0.352675943690684,1.531227386766,4.752962657138,5.6678630530234,13.8881457379722,6.56372365570416,0.252071696221718,8.92128556788411,9.36558744664736,0,0,2.47736419030255,13.7571448891259,7.39364263362165,0.381382095467167,0,0.994581110581374,0.451261970095544,0,7.03362610109783,0.785720083444267,0,0,5.33546918485318,5.46754669029693,7.23403787754144,5.64400710725771,0,3.28954660114309,0,0,7.02693352017774,4.28561468702629,7.0619581665953,0,1.13831095675649,4.61252324845722,0,0,12.6423703336907,8.09005114823044,0,0,0.156986185701028,1.57115589916002,0,0,1.07963795609311,0,0.142953088353313,0.94808167039636,0,6.25889780289286,0,6.2164849248911,34.9972878042597,35.9455024143328,18.9300037880922,0.236664001461131,0.0852134047591577,0,0,0,0,11.9685312023638,0,0,0,0,0,6.31424290976881,0,0.198950775161368,0,1.35535298446752,0,8.0010307090337,0,1.09279780251979,17.4017399653763,0,58.9191367754065,34.9429071464603,48.418563253315,25.7819993825874,0,0,0.128915775947154,0,3.21397089490184,3.17605384544123,0,0.730336388246517,4.58729283404541,11.753845818419,0,7.07111497985513,0,7.93540260773101,0.371995018166751,0,0,18.5464644507566,24.4754881198678,0.886889507080059,4.07955318967927,4.27547848424897,3.12442658418473,23.0650936148985,0.151557396436479,0.535928260312357,19.0708971075519,15.5149493792843,2.77204176471275,8.57031953269465,0.129177819672012,2.73128742901775,0.112131862580613,5.72824424503484,10.3079766368692,1.74173398317569,1.02669990325584,4.37788344594819,4.73366555591664,2.32862249582209,6.18664841443406,0,0,0,2.34640942403454,1.95586310692586,2.03448089157869,0,0.201273793591026,0 | |||
|short_description=p2@NAV2 | |||
}} |
Revision as of 06:55, 11 January 2014
Short description: | p2@NAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525322, ENST00000530408, uc001mpt.2_5end |
EntrezGene: | NAV2 |
HGNC: | 15997 |
UniProt: | E9PNV5E9PLU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.83e-18 | 58 |
endo-epithelial cell | 6.43e-15 | 42 |
epithelial cell | 8.16e-13 | 253 |
respiratory epithelial cell | 6.00e-10 | 13 |
epithelial cell of alimentary canal | 4.06e-08 | 20 |