FFCP PHASE1:Hg19::chr11:2160161..2160172,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |||
|TSSclassifier=strong | |||
|UniProt=P01344 | |||
|association_with_transcript=31bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_34_at_IGF2_5end | |||
|id=chr11:2160161..2160172,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.76e-19;19!CL:0002537;2.35e-10;5!CL:0002541;2.24e-07;3!CL:0002577;8.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.96e-19,19;CL:0002537,4.13e-10,5;CL:0002541,2.58e-07,3;CL:0002577,7.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.65e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-18!115;UBERON:0005631!6.19e-14!14;UBERON:0000158!6.19e-14!14;UBERON:0000064!1.47e-08!219;UBERON:0000478!1.78e-08!24;UBERON:0003124!6.77e-08!7;UBERON:0000305!1.18e-07!7;UBERON:0000481!1.64e-07!347;UBERON:0004923!3.45e-07!57;UBERON:0002616!7.08e-07!59;UBERON:0001046!8.33e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.66e-20;10!UBERON:0000158;6.66e-20;10!UBERON:0000478;4.14e-19;24!UBERON:0000305;3.32e-14;7!UBERON:0001987;9.84e-09;4!UBERON:0000922;1.69e-07;49!UBERON:0003124;2.24e-07;3!UBERON:0000920;2.24e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.77e-27,14;UBERON:0000158,9.77e-27,14;UBERON:0000478,5.95e-19,24;UBERON:0003124,1.92e-14,7;UBERON:0000305,5.90e-14,7;UBERON:0004871,4.76e-12,8;UBERON:0001987,8.50e-09,4;UBERON:0004340,8.50e-09,4;UBERON:0004923,6.15e-08,66;UBERON:0000920,2.58e-07,3 | |||
|phase1_expression=0,0.428201047781966,0,0,0.893922188854576,2.61701557230111,0,0,0,0,1.39560233594486,11.7958340950293,15.2984847372503,0.247532705920093,1.32558950291166,0,0,0,0,0.369363174230364,1.02000345622126,0.313454721478088,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81628913173918,5.18558332031999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0.910161361938026,0,0,0,0,1.75591048352335,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.464775771478074,0.414644220061482,0.504641701751257,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4218322928545,0,0,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48768055066624,0,0,0,0,1.06375246633948,1.04007436911366,0.257207374262142,0,0.266422179016099,1.00084595560703,27.1310802695722,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,0.500170521059677,0.542530047399471,0.415941723061614,0.713715955188647,0.157702415033935,0.702848489956279,0.601892199455438,2.27407504055985,2.0694614258501,0,0,0,14.8808879671683,32.5986252620313,0,0,0,5.75942385747893,1.66435439510497,16.3290758398027,0,0,0,0,1.02341449813341,0.160853921143607,0,0,0,0,0,0,18.4914957875182,0.200506470303285,0.0920809889358963,0.459257792658427,0,0.262248829918848,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,1.08378575017541,0,0,0,0,0,0,0,0.328014645699706,0,2.7821073144885,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0.290033387828457,0.170453254832202,4.27353771104339,0.495854746082934,1.15314040419064,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0.255897791311334,1.28381696410176,0,0,0.539617372749944,0.274537029736055,0.353437207037059,0,0,0.421258456238981,3.41343617362713,0,0,1.63799893689583,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0.88424136911809,0,0,0,0.329294892959902,0.75894634753143,0,0.0962221127255121,0,0,3.95403963262472,1.29151611801369,0,3.99087138183008,3.44585100310439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0.852408440419239,22.6807260500806,10.690728509975,38.0879270603048,0.994147647766298,0,0,0,0.422250816255987,0.996239941255349,0.828851746593443,0.251932747854276,0,0,0,0,0,0,1.479651084554,0,0,0,0.185536196323703,0,0,0,5.79999660347835,0,0,0,0.344743373241465,0,0,1.77148277162768,0.120596438625408,0,0.331737779793674,0,0.438770794307945,0,0.139423744278603,1.15425387755696,0,2.76676685265672,0,0.108647371922008,20.7350753825748,2.10674464824283,102.342676995578,0,0,0,0,0,0,0,0,0,0,1.27217764290547,0,0,0.442287822516696,3.05515072466813,0,0,0,0.337005664903385,16.8541305932746,0,0,0,0,0,8.46935012340647,0.30607276163049,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.775912131907355,0.176512253383001,4.29363407483012,0,0,0.379864775735272,0,0,0.213452994739353,4.79543062997113,0,0,28.3131746472242,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,2.51354161145029,2.97908551215189,5.0251111720377,0.798716001995964,0.858452096273142,2.00854311697685,4.23255876666375,0.360299883542404,0,16.3081187375953,13.4337849161301,15.9746398934418,7.6773435581504,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.630445658393585,1.78345599658994,0.105600336519406,0,0,2.1440859791201,2.64836788146173,0,0,0,0,0,0,0,0.226624183040251,0,25.1763088933221,0.129282956361551,0.26446520348538,0,0,0.320362237703084,1.41483874589699,0,0.992332043623902,0,0,0,0.544017803369474,1.7548292581589,0.306345576763462,1.31149052283922,0,0,0.244052529803926,0.1251909307065,0,0.443716206147409,0.248385611765534,0,0.124980407962107,0,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0.800055529326307,0,0,3.78554694685953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0.622077260032973,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0.705351887381368,0.3062454773532,0.128458450192919,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0.690359926060101,2.98374333174412,1.72983755203292,0,0,0,0,0,0.270150338473579,0,0,0.0634158101939068,0.546974809018219,0,1.98484471355718,0,0,0,0,0,0,13.0392484139079,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.706437835654626,0.157115589916002,2.80272163313789,6.39211104356647,0,0,1.6439605160631,0.158013611732727,0,12.1700790611806,2.405134094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| |||
|short_description=p34@IGF2 | |||
}} |
Revision as of 06:10, 11 January 2014
Short description: | p34@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 31bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.96e-19 | 19 |
amnion mesenchymal stem cell | 4.13e-10 | 5 |
chorionic membrane mesenchymal stem cell | 2.58e-07 | 3 |
placental epithelial cell | 7.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.77e-27 | 14 |
membranous layer | 9.77e-27 | 14 |
extraembryonic structure | 5.95e-19 | 24 |
chorion | 1.92e-14 | 7 |
amnion | 5.90e-14 | 7 |
somatic layer of lateral plate mesoderm | 4.76e-12 | 8 |
placenta | 8.50e-09 | 4 |
allantois | 8.50e-09 | 4 |
organ component layer | 6.15e-08 | 66 |
egg chorion | 2.58e-07 | 3 |