FFCP PHASE1:Hg19::chr11:208815..208853,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60626 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29550 | |||
|TSSclassifier=strong | |||
|UniProt=E9PSI0 | |||
|association_with_transcript=0bp_to_ENST00000530889,ENST00000532373_5end | |||
|description=CAGE_peak_3_at_RIC8A_5end | |||
|id=chr11:208815..208853,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.81e-39!679;CL:0000004!2.81e-39!679;CL:0000255!2.81e-39!679;CL:0000144!5.88e-39!625;CL:0000012!1.37e-38!682;CL:0002371!2.91e-36!591;CL:0000055!1.90e-31!180;CL:0000003!2.76e-29!722;CL:0000222!2.61e-25!119;CL:0000220!9.67e-24!246;CL:0002321!2.61e-23!248;CL:0000057!5.47e-16!75;CL:0000183!8.36e-16!59;CL:0000063!8.28e-15!578;CL:0000680!6.20e-14!57;CL:0000056!6.20e-14!57;CL:0000355!6.20e-14!57;CL:0000192!1.31e-13!42;CL:0000514!1.31e-13!42;CL:0000187!1.74e-13!54;CL:0000393!5.33e-12!60;CL:0000211!5.33e-12!60;CL:0000213!8.55e-11!57;CL:0000215!8.55e-11!57;CL:0000359!1.75e-10!32;CL:0000723!2.23e-09!436;CL:0000048!6.14e-09!430;CL:0000034!8.47e-09!444;CL:0000066!1.05e-08!254;CL:0002078!2.48e-08!44;CL:0002620!1.70e-07!23;CL:0000076!1.95e-07!62;CL:0000115!2.29e-07!35;CL:1000449!2.80e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.37e-10;32!CL:0000192;3.57e-09;43!CL:1000449;2.69e-08;15!CL:0000187;1.45e-07;55!CL:0002620;1.69e-07;23!CL:1000497;1.74e-07;17!CL:0002518;1.74e-07;17!CL:0002681;3.00e-07;12!CL:0002584;3.00e-07;12!CL:0000057;3.42e-07;73!CL:0000134;4.59e-07;55!CL:0000213;4.95e-07;58!CL:0000215;4.95e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.52e-25,121;CL:0002321,2.38e-23,250;CL:0000057,4.05e-16,76;CL:0000680,2.75e-13,58;CL:0000056,2.75e-13,58;CL:0000355,2.75e-13,58;CL:0000192,7.76e-13,43;CL:0000514,7.76e-13,43;CL:0000187,7.83e-13,55;CL:0000393,1.94e-11,61;CL:0000211,1.94e-11,61;CL:0000213,3.19e-11,58;CL:0000215,3.19e-11,58;CL:0000359,1.75e-10,32;CL:0000723,2.81e-09,433;CL:0000066,6.46e-09,253;CL:0000048,7.69e-09,427;CL:0002078,9.51e-09,45;CL:0000034,1.07e-08,441;CL:1000449,2.75e-08,15;CL:0000115,8.64e-08,36;CL:0002620,1.70e-07,23;CL:1000497,1.98e-07,17;CL:0002518,1.98e-07,17;CL:0000076,2.86e-07,63;CL:0002681,3.15e-07,12;CL:0002584,3.15e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;3.57e-09;43!CL:0000222;5.04e-08;121!CL:0000355;2.97e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.04e-16!79;UBERON:0007798!1.04e-16!79;UBERON:0000486!2.71e-15!82;UBERON:0000055!5.66e-15!69;UBERON:0004535!1.68e-14!110;UBERON:0004872!2.76e-14!84;UBERON:0000914!8.56e-14!83;UBERON:0002329!8.56e-14!83;UBERON:0003077!8.56e-14!83;UBERON:0003059!8.56e-14!83;UBERON:0007282!8.56e-14!83;UBERON:0009618!8.56e-14!83;UBERON:0007285!8.56e-14!83;UBERON:0004290!2.67e-13!70;UBERON:0001981!2.69e-13!60;UBERON:0007500!2.69e-13!60;UBERON:0004537!2.69e-13!60;UBERON:0006965!2.69e-13!60;UBERON:0001009!3.67e-13!113;UBERON:0005256!1.00e-12!143;UBERON:0003914!1.58e-12!118;UBERON:0001637!2.83e-12!42;UBERON:0003509!2.83e-12!42;UBERON:0004572!2.83e-12!42;UBERON:0000490!1.74e-11!138;UBERON:0001134!3.03e-11!61;UBERON:0002036!3.03e-11!61;UBERON:0003082!3.03e-11!61;UBERON:0002385!2.74e-10!63;UBERON:0001015!2.74e-10!63;UBERON:0000383!2.74e-10!63;UBERON:0004573!1.48e-09!33;UBERON:0004571!1.48e-09!33;UBERON:0002100!9.13e-09!216;UBERON:0002199!2.78e-08!45;UBERON:0002416!2.78e-08!45;UBERON:0003102!3.90e-08!95;UBERON:0002097!1.21e-07!40;UBERON:0004211!2.80e-07!16;UBERON:0001285!2.80e-07!16;UBERON:0007684!2.80e-07!16;UBERON:0003220!2.80e-07!16;UBERON:0004208!2.80e-07!16;UBERON:0000353!5.44e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.45e-09;42!UBERON:0003509;4.45e-09;42!UBERON:0004572;4.45e-09;42!UBERON:0003914;5.77e-09;74!UBERON:0007500;9.68e-09;56!UBERON:0001981;9.68e-09;56!UBERON:0004537;9.68e-09;56!UBERON:0004573;1.04e-08;33!UBERON:0004571;1.04e-08;33!UBERON:0006555;2.69e-08;15!UBERON:0004819;2.69e-08;15!UBERON:0001285;2.69e-08;15!UBERON:0007684;2.69e-08;15!UBERON:0000055;5.44e-08;65!UBERON:0000353;7.01e-08;15!UBERON:0002049;1.23e-07;75!UBERON:0007798;1.23e-07;75!UBERON:0001225;3.00e-07;12!UBERON:0008987;3.00e-07;12 | |||
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| |||
|short_description=p3@RIC8A | |||
}} |
Revision as of 05:45, 11 January 2014
Short description: | p3@RIC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RIC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530889, ENST00000532373_5end |
EntrezGene: | RIC8A |
HGNC: | 29550 |
UniProt: | E9PSI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.52e-25 | 121 |
embryonic cell | 2.38e-23 | 250 |
fibroblast | 4.05e-16 | 76 |
muscle precursor cell | 2.75e-13 | 58 |
myoblast | 2.75e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.75e-13 | 58 |
smooth muscle cell | 7.76e-13 | 43 |
smooth muscle myoblast | 7.76e-13 | 43 |
muscle cell | 7.83e-13 | 55 |
electrically responsive cell | 1.94e-11 | 61 |
electrically active cell | 1.94e-11 | 61 |
lining cell | 3.19e-11 | 58 |
barrier cell | 3.19e-11 | 58 |
vascular associated smooth muscle cell | 1.75e-10 | 32 |
somatic stem cell | 2.81e-09 | 433 |
epithelial cell | 6.46e-09 | 253 |
multi fate stem cell | 7.69e-09 | 427 |
meso-epithelial cell | 9.51e-09 | 45 |
stem cell | 1.07e-08 | 441 |
epithelial cell of nephron | 2.75e-08 | 15 |
endothelial cell | 8.64e-08 | 36 |
skin fibroblast | 1.70e-07 | 23 |
kidney cell | 1.98e-07 | 17 |
kidney epithelial cell | 1.98e-07 | 17 |
squamous epithelial cell | 2.86e-07 | 63 |
kidney cortical cell | 3.15e-07 | 12 |
renal cortical epithelial cell | 3.15e-07 | 12 |