FFCP PHASE1:Hg19::chr10:6779369..6779400,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000417112_5end | |||
|coexpression_cluster_id=C3035 | |||
|description=CAGE_peak_1_at_ENST00000417112_5end | |||
|id=chr10:6779369..6779400,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.77e-37!254;CL:0002076!5.07e-11!43;CL:0000076!6.06e-10!62;CL:1000449!6.22e-09!16;CL:1000497!1.57e-08!18;CL:0002518!1.57e-08!18;CL:1000507!3.00e-08!12;CL:1000494!3.00e-08!12;CL:0000220!1.12e-07!246;CL:0002321!1.97e-07!248;CL:0002368!4.23e-07!13;CL:0002681!8.35e-07!13;CL:0002584!8.35e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.82e-12;10!CL:1000494;1.82e-12;10!CL:1000449;2.56e-11;15!CL:0002076;7.13e-10;42!CL:1000497;1.13e-09;17!CL:0002518;1.13e-09;17!CL:0002368;1.22e-08;13!CL:0002681;7.06e-08;12!CL:0002584;7.06e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.19e-40,253;CL:1000507,2.26e-12,10;CL:1000494,2.26e-12,10;CL:0002076,9.96e-12,42;CL:1000449,3.34e-11,15;CL:0000076,1.64e-10,63;CL:1000497,1.42e-09,17;CL:0002518,1.42e-09,17;CL:0002368,1.38e-08,13;CL:0000223,8.06e-08,58;CL:0002681,9.72e-08,12;CL:0002584,9.72e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.77e-08;29 | |||
|ontology_enrichment_disease=DOID:305!2.36e-12!106;DOID:1749!1.12e-10!14;DOID:0050687!9.22e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.96e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.84e-17,106;DOID:1749,4.15e-14,14;DOID:0050687,8.04e-12,143;DOID:162,1.38e-07,235;DOID:14566,3.66e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.48e-17!169;UBERON:0000925!3.48e-17!169;UBERON:0006595!3.48e-17!169;UBERON:0000064!1.99e-16!219;UBERON:0000481!1.48e-14!347;UBERON:0001004!1.28e-13!72;UBERON:0000065!4.31e-12!53;UBERON:0001007!3.29e-11!155;UBERON:0001555!3.29e-11!155;UBERON:0007026!3.29e-11!155;UBERON:0000072!4.11e-11!46;UBERON:0006554!2.68e-10!44;UBERON:0003104!5.17e-10!238;UBERON:0009142!5.17e-10!238;UBERON:0001008!7.38e-10!45;UBERON:0008947!8.62e-10!38;UBERON:0003258!8.62e-10!38;UBERON:0000080!8.63e-10!18;UBERON:0002120!8.63e-10!18;UBERON:0004875!8.63e-10!18;UBERON:0005721!8.63e-10!18;UBERON:0005754!8.63e-10!18;UBERON:0007297!8.63e-10!18;UBERON:0004876!1.56e-09!20;UBERON:0000062!1.97e-09!511;UBERON:0006555!2.07e-09!17;UBERON:0005103!2.07e-09!17;UBERON:0000083!2.07e-09!17;UBERON:0009201!2.07e-09!17;UBERON:0004819!2.07e-09!17;UBERON:0006553!2.07e-09!17;UBERON:0003074!2.07e-09!17;UBERON:0003060!2.07e-09!17;UBERON:0000063!3.72e-09!97;UBERON:0001737!5.73e-09!9;UBERON:0004211!6.22e-09!16;UBERON:0001285!6.22e-09!16;UBERON:0007684!6.22e-09!16;UBERON:0003220!6.22e-09!16;UBERON:0004208!6.22e-09!16;UBERON:0000922!1.15e-08!612;UBERON:0000077!1.40e-08!130;UBERON:0000475!1.45e-08!365;UBERON:0000058!1.62e-08!26;UBERON:0009773!3.00e-08!12;UBERON:0001231!3.00e-08!12;UBERON:0004810!3.00e-08!12;UBERON:0000464!3.86e-08!104;UBERON:0005631!4.03e-08!14;UBERON:0000158!4.03e-08!14;UBERON:0000923!4.25e-08!604;UBERON:0005291!4.25e-08!604;UBERON:0006598!4.25e-08!604;UBERON:0002532!4.25e-08!604;UBERON:0002050!5.30e-08!605;UBERON:0005423!5.30e-08!605;UBERON:0003064!5.49e-08!37;UBERON:0003887!1.17e-07!21;UBERON:0005177!2.06e-07!107;UBERON:0004921!2.76e-07!129;UBERON:0004185!2.76e-07!129;UBERON:0000119!4.25e-07!312;UBERON:0002113!4.95e-07!27;UBERON:0003918!4.95e-07!27;UBERON:0005095!4.95e-07!27;UBERON:0007687!4.95e-07!27;UBERON:0000468!5.66e-07!659;UBERON:0000483!6.96e-07!309;UBERON:0001048!7.92e-07!168;UBERON:0000020!8.28e-07!23;UBERON:0001225!8.35e-07!13;UBERON:0008987!8.35e-07!13;UBERON:0001444!9.08e-07!48;UBERON:0000466!9.41e-07!126;UBERON:0001041!9.43e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.80e-14;9!UBERON:0001557;3.80e-14;9!UBERON:0004211;1.82e-12;10!UBERON:0009773;1.82e-12;10!UBERON:0001231;1.82e-12;10!UBERON:0004810;1.82e-12;10!UBERON:0000072;2.55e-12;37!UBERON:0000065;9.26e-12;44!UBERON:0006555;2.56e-11;15!UBERON:0004819;2.56e-11;15!UBERON:0001285;2.56e-11;15!UBERON:0007684;2.56e-11;15!UBERON:0001004;7.89e-09;65!UBERON:0002294;2.90e-08;7!UBERON:0001173;2.90e-08;7!UBERON:0001225;7.06e-08;12!UBERON:0008987;7.06e-08;12!UBERON:0006554;1.14e-07;30!UBERON:0001008;1.14e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.59e-15,74;UBERON:0004119,4.22e-15,160;UBERON:0000925,4.22e-15,160;UBERON:0006595,4.22e-15,160;UBERON:0001737,2.47e-14,9;UBERON:0008947,1.17e-12,38;UBERON:0003258,1.17e-12,38;UBERON:0000065,1.57e-12,54;UBERON:0004810,2.26e-12,10;UBERON:0004211,3.34e-11,15;UBERON:0009773,3.34e-11,15;UBERON:0001231,3.34e-11,15;UBERON:0001285,3.34e-11,15;UBERON:0007684,3.34e-11,15;UBERON:0004208,3.34e-11,15;UBERON:0006555,2.46e-10,16;UBERON:0004819,2.46e-10,16;UBERON:0000072,2.74e-10,47;UBERON:0001007,5.57e-10,145;UBERON:0001555,5.57e-10,145;UBERON:0007026,5.57e-10,145;UBERON:0001225,9.72e-08,12;UBERON:0008987,9.72e-08,12;UBERON:0001557,4.50e-07,19;UBERON:0006554,6.85e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,3.48900583986214,3.49506195408276,2.11013582582763,0.74259811776028,0,0,0,0,0,0.123121058076788,0.816002764977012,0,0.286235987131057,2.18999080116615,0.125542639594803,0,0,0,0,0,0,4.59710612239464,5.72291245678675,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.661743720148475,0.665188192387692,0.614843499851882,0,13.8432209551166,11.8651021691017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,2.61656431285521,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,1.17160715916898,0,0,0,0.117434498643765,0.323745888736263,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,3.47869535693934,4.09119180886252,10.3249654340041,0,0,0,0.10366105501537,0.756962552626885,0,0,0,0,0,0,3.785817601275,4.72037132218685,4.57920956778616,3.74999507290139,3.7039505495709,5.21995362044413,2.56179485504312,4.70931516300831,4.61696588335668,0,0,0,0,0,0,0,0,0.122988438543114,0.686271241194102,1.75600456653801,2.24803506515239,17.4920411996238,5.92566049014589,0,1.03993478527958,0,0.579652024875384,0,0,0,0,0,0,0,0,0,3.74935335947108,0,2.69372684760534,4.83616022595381,15.112964802726,10.7347150166259,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,0,0,0.26593811658487,0,0.771622122786426,4.25547396069835,1.3321108950805,1.71573592389777,0,0.823240336780769,0,0.710783897485092,2.37585561880029,0.904318131178758,0.871533458600294,0.99972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,0,0,0,0,0,0,0,0,0,0.347534457872331,0.195801157462741,0,0,0,0,1.21251028578504,3.32870879020994,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40860999515584,0.552485933615378,0.459257792658427,0,0.262248829918848,8.57279264524082,3.54270550680308,7.0591479225917,2.92278449306521,1.68882606228601,1.13733384070897,0,0.215915916102139,0,0.270946437543853,2.00675909541941,7.64628819135115,8.31076008928724,2.0148727924996,0,0,2.56450125116389,0.328014645699706,0.325378394664303,0,0,0,1.72279661398852,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0,3.14041339185858,2.30628080838127,4.97689578728878,1.8208400553999,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.767693373934002,0.42793898803392,0,0,0.179872457583315,1.37268514868027,1.7671860351853,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,1.73632660280006,0.655894752046633,0,0.6196469961995,0,0.143411352204052,0,0,0.354761064070598,0,0,4.17420491142287,9.44823744661454,2.02066436723575,3.35151137767894,2.17781969722645,0.0941438007767792,3.01353760869861,6.73885902670502,3.54744122829341,0.918893600827838,0,0,0,0,0,0,0,0,0,0,9.55656842326024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,8.83354593529453,0.593929361665277,6.14321404198464,0,0.140669416410513,0.333926115068718,0,0.211125408127993,0,0,0,7.97695723516807,0,0,2.87578723671446,8.59301638442924,0,0,0,0,0,0,0,0,0,0,8.64830206969797,0,0.709163045303809,0,0,0,0.885741385813839,0,0,0,0,0,1.52513848926586,0.41827123283581,0,0,0,0,0,1.91400695839152,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.265372693510018,0,0,0,0,0,1.60515529459758,0.702793337176017,0,1.9566461893209,0,0,0,0,0,0,0,0.664653872707185,0,0,2.38944859545918,0,0.138674673013139,0,5.87954384486266,17.2377229029197,0.698906672968121,0,1.74161396320353,0.950161122120412,2.21711734043665,0.193978032976839,0,0.225980740780532,1.50746117111426,0.596143835108969,0,1.95551382734803,3.44682927081595,11.526461715925,0.999048047910651,0,0,0,3.02515075775114,21.4956886528198,7.30651507312066,7.20292292190154,8.78663909023599,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0,0,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,2.34804281319486,0.236417121897595,0.157363764404994,0,1.07572403599707,7.48469269545837,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,10.7784707867128,8.45778026780006,0,0,0,0,0,0,8.93677760878255,0,0,0,0,0,0,0,0,0,0,0.310482014706917,0,1.99968652739371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0.260994291965212,2.04035332961045,0.231522474323834,0.734210113519403,1.07453304648892,8.02883762618528,0.438568099157414,1.59020231351293,0,3.37884881306145,0,6.56317649289277,7.90035886061194,0,0,0,0,0,15.2379203427306,14.157912265028,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0,0,0,0,0,0,1.76665893301846,5.07269810395284,5.86971515269373,0.231051332300676,0,0.690359926060101,0,0.376051641746286,0,0,0,6.387104782893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| |||
|short_description=p1@ENST00000417112 | |||
}} |
Revision as of 01:36, 11 January 2014
Short description: | p1@ENST00000417112 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000417112_5end |
Coexpression cluster: | C3035_prostate_signet_epidermoid_Keratinocyte_giant_Mammary_mucinous |
Association with transcript: | 25bp_to_ENST00000417112_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.19e-40 | 253 |
kidney tubule cell | 2.26e-12 | 10 |
nephron tubule epithelial cell | 2.26e-12 | 10 |
endo-epithelial cell | 9.96e-12 | 42 |
epithelial cell of nephron | 3.34e-11 | 15 |
squamous epithelial cell | 1.64e-10 | 63 |
kidney cell | 1.42e-09 | 17 |
kidney epithelial cell | 1.42e-09 | 17 |
respiratory epithelial cell | 1.38e-08 | 13 |
endodermal cell | 8.06e-08 | 58 |
kidney cortical cell | 9.72e-08 | 12 |
renal cortical epithelial cell | 9.72e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.59e-15 | 74 |
endoderm-derived structure | 4.22e-15 | 160 |
endoderm | 4.22e-15 | 160 |
presumptive endoderm | 4.22e-15 | 160 |
larynx | 2.47e-14 | 9 |
respiratory primordium | 1.17e-12 | 38 |
endoderm of foregut | 1.17e-12 | 38 |
respiratory tract | 1.57e-12 | 54 |
nephron tubule epithelium | 2.26e-12 | 10 |
nephron epithelium | 3.34e-11 | 15 |
renal tubule | 3.34e-11 | 15 |
nephron tubule | 3.34e-11 | 15 |
nephron | 3.34e-11 | 15 |
uriniferous tubule | 3.34e-11 | 15 |
nephrogenic mesenchyme | 3.34e-11 | 15 |
excretory tube | 2.46e-10 | 16 |
kidney epithelium | 2.46e-10 | 16 |
segment of respiratory tract | 2.74e-10 | 47 |
digestive system | 5.57e-10 | 145 |
digestive tract | 5.57e-10 | 145 |
primitive gut | 5.57e-10 | 145 |
cortex of kidney | 9.72e-08 | 12 |
renal parenchyma | 9.72e-08 | 12 |
upper respiratory tract | 4.50e-07 | 19 |
urinary system structure | 6.85e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.84e-17 | 106 |
squamous cell carcinoma | 4.15e-14 | 14 |
cell type cancer | 8.04e-12 | 143 |
cancer | 1.38e-07 | 235 |
disease of cellular proliferation | 3.66e-07 | 239 |