FFCP PHASE1:Hg19::chr1:246887491..246887496,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51097 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24275 | |||
|TSSclassifier=strong | |||
|UniProt=E9PEA8,Q8NBX0 | |||
|association_with_transcript=113bp_to_ENST00000366509,NM_016002,uc001ibr.2_5end | |||
|description=CAGE_peak_5_at_SCCPDH_5end | |||
|id=chr1:246887491..246887496,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.83e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.66e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.28e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.44e-11;29 | |||
|ontology_enrichment_disease=DOID:162!2.47e-11!235;DOID:14566!4.92e-11!239;DOID:305!8.42e-09!106;DOID:0050687!1.10e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.23e-09,106;DOID:0050687,8.14e-08,143;DOID:162,6.07e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.53e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.56e-24;9!UBERON:0001557;3.56e-24;9!UBERON:0005631;1.21e-08;10!UBERON:0000158;1.21e-08;10!UBERON:0003124;3.66e-08;3!UBERON:0000920;3.66e-08;3!UBERON:0000072;2.70e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.95e-24,9;UBERON:0001557,2.07e-12,19;UBERON:0000920,1.28e-08,3;UBERON:0005631,3.00e-08,14;UBERON:0000158,3.00e-08,14;UBERON:0001041,1.12e-07,87;UBERON:0004921,1.26e-07,118;UBERON:0008947,1.29e-07,38;UBERON:0003258,1.29e-07,38 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0.436882744260345,0.527533956456907,0.495065411840187,0.662794751455832,0,0,0,0.487932798790507,0.369363174230364,0,0,0,0.547497700291537,0.753255837568817,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,0.587200878669695,0,0,0.217010870715852,0.895661896959697,0.32389366601898,0.515151135268373,0.290796477559129,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0.44931452458598,0.150176892841506,0.16072558669708,0.570025487482497,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,1.44575660953827,1.00267582127178,1.30361867064741,0.795285947051099,0.973269740605272,0.661743720148475,0.221729397462564,0.351339142772504,0.327447688744282,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0.419499436209906,0.275118041940067,0,1.03366703667732,0,1.33888245105868,0,0,0.24406205754817,0.735326160691737,0.81014194788176,0.803697554556718,0.22452937262617,0.563057402416611,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.269421344139376,0.490385709340376,0,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0.939475989150119,0.323745888736263,0.561803226808994,0.204154171254893,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,0.910161361938026,0,0.673344455816265,0.625592599359821,0.277064115484183,0,0.30648779579902,0.45071417671979,0.340296549480063,0.179389635688862,0.640672166455702,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,0.558350568994769,0.337552664482532,0.0974370051611986,0.252433774244115,0.276149695926898,0.646584227275248,0.355009592516614,0.302256294682921,0.508681776931463,0.386521706326594,0,0.286804595389004,0.609868530647977,0.265059536642971,0.69716365721711,0,0.756962552626885,1.45990943630332,0,0.643240938192885,1.38134921352481,0.464367928031979,0,3.31259040111563,4.72037132218685,3.37415441836875,3.19852520923942,4.79334777003293,3.32178866755535,4.1797705529651,3.13954344200554,4.61696588335668,0.738155454624648,0,1.6462960453256,0,6.33775174109154,0,0.590789906681404,0,0.491953754172454,0,0.219500570817251,0,0.301586917234893,0.185176890317059,0,0,0,0.463721619900307,0.352226082707465,0.577465791044295,0.462985512576611,1.14152491340759,0,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.283550194484773,0.268675568108545,0,0,0,0,0,0.144119953416961,0.12624243342638,0.63497894292169,0.381988425558278,1.17217447210047,0,0.514137463516618,1.20137223137567,1.71495859578347,0.336393253036082,0,0.4400297149257,0,0,0,0.797814349754612,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0.871533458600294,0.499864955910285,0,0,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0.831883446123229,0.892144943985809,0.473107245101804,0.234282829985426,0.601892199455438,0,0,0,0.368738337083406,1.04260337361699,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0.303127571446259,0,0.604780586659361,0.496215615637554,0.306923946576125,0.561320188866147,0.384417447767103,1.02341449813341,0.160853921143607,0,0.616838775210622,0.355123450626254,0.657017248110473,0,0.348631135379878,0.362578348774867,0.40101294060657,0.0920809889358963,0.34444334449382,0.364182336013434,0.262248829918848,0.902399225814824,0.231046011313244,0,0,0.211103257785751,0,0.510281115829547,0.647747748306418,0,0,0,1.27438136522519,0.831076008928724,1.34324852833307,0.657779629937804,0.784306353074702,0.769350375349168,0.984043937099117,0.650756789328606,1.03041011647722,0.0915694648183434,0.330037999682352,0,0,0,0.193341436584244,0.462145851343933,0.614014698904518,0,0.751941714077915,0.580066775656914,0.340906509664404,0.534192213880424,0.330569830721956,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0.855877976067841,0,0,0.179872457583315,0.54907405947211,0.824686816419805,0,0,0.421258456238981,0.48763373908959,0.731140468893853,1.05650146756755,0.409499734223957,0.282810863907425,0,0,0,0.438450885253763,0.578775534266688,0,0.405820753925408,0,0.281695602532241,0.573645408816206,0.491245205065606,0,0,0.633322905892992,0.987884678879706,0.379473173765715,0,0.0962221127255121,0,0,0.847294206991012,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0.640944426764839,0.962479855263359,2.45040215981032,0.185803175125719,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| |||
|short_description=p5@SCCPDH | |||
}} |
Revision as of 01:13, 11 January 2014
Short description: | p5@SCCPDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCCPDH_5end |
Coexpression cluster: | NA |
Association with transcript: | 113bp_to_ENST00000366509, NM_016002, uc001ibr.2_5end |
EntrezGene: | SCCPDH |
HGNC: | 24275 |
UniProt: | E9PEA8Q8NBX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.28e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.95e-24 | 9 |
upper respiratory tract | 2.07e-12 | 19 |
egg chorion | 1.28e-08 | 3 |
extraembryonic membrane | 3.00e-08 | 14 |
membranous layer | 3.00e-08 | 14 |
foregut | 1.12e-07 | 87 |
subdivision of digestive tract | 1.26e-07 | 118 |
respiratory primordium | 1.29e-07 | 38 |
endoderm of foregut | 1.29e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.23e-09 | 106 |
cell type cancer | 8.14e-08 | 143 |
cancer | 6.07e-07 | 235 |