FFCP PHASE1:Hg19::chr1:207818460..207818496,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1379 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2335 | |||
|TSSclassifier=strong | |||
|UniProt=Q2VPA4 | |||
|association_with_transcript=2bp_to_ENST00000444269,ENST00000531844,NM_175710,uc001hfz.2,uc001hga.3_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_CR1L_5end | |||
|id=chr1:207818460..207818496,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.07e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.37e-20;5!CL:0000764;1.78e-09;2!CL:0000558;1.78e-09;2!CL:0000039;3.00e-09;7!CL:0000586;3.00e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.21e-20,5;CL:0000764,1.78e-09,2;CL:0000765,1.78e-09,2;CL:0000050,1.78e-09,2;CL:0000038,1.78e-09,2;CL:0000558,1.78e-09,2;CL:0000547,1.78e-09,2;CL:0000549,1.78e-09,2;CL:0000550,1.78e-09,2;CL:0000552,1.78e-09,2;CL:0000039,3.06e-09,7;CL:0000586,3.06e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.46e-09;10!UBERON:0005564;1.46e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;7.33e-18;8!DOID:8692;1.07e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.45e-18,8;DOID:8692,6.29e-09,31;DOID:1240,9.41e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.69e-17!115;UBERON:0000178!5.96e-07!15;UBERON:0000179!5.96e-07!15;UBERON:0000463!5.96e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.93e-14;15!UBERON:0000179;1.93e-14;15!UBERON:0000463;1.93e-14;15!UBERON:0000922;2.14e-12;49!UBERON:0000341;3.71e-08;2!UBERON:0000473;4.30e-08;8!UBERON:0002390;1.59e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.72e-14,15;UBERON:0000179,1.72e-14,15;UBERON:0000463,1.72e-14,15;UBERON:0000341,3.14e-08,2;UBERON:0000473,4.38e-08,8 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,1.35426486594342,0,0,0,0.612167784741805,0,0,0,0.997318288108159,0,0,0,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0,0,0,0,0.355009592516614,0.403008392910561,0.169560592310488,0,0.272746120590835,0,14.8807921478106,10.0722623924329,22.8902067452951,14.3052255921211,23.2135182805578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,251.271818636241,234.769035020361,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,5.07447609232169,6.117097657139,2.84823593587081,1.90585420366231,0.822724546172388,3.8908398671563,4.32025149790492,7.13812658664843,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,41.8497156422222,66.5320969050918,0,11.278960407028,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0.552567831062295,0,0,0.123084805461069,0,0.0898683511473268,0.358042349351218,0,0,4.7896618469388,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0.997270091400938,55.4965325118264,52.1526341285187,59.5766633764242,136.812441294137,8.26470210697969,0.421996129056054,0,0,0,0.995261931078505,0.0884575645033392,1.22206028986725,0,0,0.104421949505455,0.404406797884062,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,0,0.91821828489147,0.252746318513952,2.55549813004637,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0,0,0,1.34366944973453,0,0,0,0,0.0674035438541849,0,0,0,0.272406812223151,8.84142316557605,8.38990563243126,7.89336642255452,0,0,0,0,1.02447419488958,0.996637174564964,0,0,0,0,0,0,0,0,0,0,162.379006042192,0,0,0.293104467356165,67.5785133452329,0.517131825446202,0.13223260174269,0,0,0.213574825135389,9.58946261107962,1.24271716604159,0.496166021811951,0,22.6534232988466,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0.573409195690071,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.471797825567689,0,0.169732529954025,0,0.371807292777007,0,0,0,0,0,0,0.128458450192919,0,1.27707087245721,0.41023272848151,0,0,0.645902582527404,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0.79832133146375,0.115233987555779,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0.913158720509496,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,3.57937381752935,0,0,0,0,1.1598144313382,0,9.82545746540844,0,0.118920090777569,0,0,1.35866559210006,0,0.218559560503957,0.940634592723046,0,0,0.196308467114945,1.78227840196252,0,0,0.187967835959707,11.0867567314553,0,0,0,0,0,0.458729283404541,0.430018749454354,0,0.135982980381829,0.436350690340377,0,0,0,0,0.126166424835079,15.4064456468811,1.64708051314868,6.42529627374485,57.7189595373611,154.291536319005,8.022641257356,0,0,0,1.13776295448085,4.90438158372256,1.42838658878244,0,0.558672428662721,0,0.12729431655633,0.404234377916439,0,0.342233301085281,0.336760265072938,0.430333232356058,2.32862249582209,0.0814032686109745,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p1@CR1L | |||
}} |
Revision as of 23:54, 10 January 2014
Short description: | p1@CR1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CR1L_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 2bp_to_ENST00000444269, ENST00000531844, NM_175710, uc001hfz.2, uc001hga.3_5end |
EntrezGene: | CR1L |
HGNC: | 2335 |
UniProt: | Q2VPA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.21e-20 | 5 |
erythroid lineage cell | 1.78e-09 | 2 |
erythroblast | 1.78e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 1.78e-09 | 2 |
erythroid progenitor cell | 1.78e-09 | 2 |
reticulocyte | 1.78e-09 | 2 |
proerythroblast | 1.78e-09 | 2 |
basophilic erythroblast | 1.78e-09 | 2 |
polychromatophilic erythroblast | 1.78e-09 | 2 |
orthochromatic erythroblast | 1.78e-09 | 2 |
germ line cell | 3.06e-09 | 7 |
germ cell | 3.06e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
blood | 1.72e-14 | 15 |
haemolymphatic fluid | 1.72e-14 | 15 |
organism substance | 1.72e-14 | 15 |
throat | 3.14e-08 | 2 |
testis | 4.38e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.45e-18 | 8 |
myeloid leukemia | 6.29e-09 | 31 |
leukemia | 9.41e-07 | 39 |