FFCP PHASE1:Hg19::chr1:207112630..207112643,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8968 | |||
|TSSclassifier=strong | |||
|UniProt=P01833 | |||
|association_with_transcript=0bp_to_M24559_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_13_at_PIGR_5end | |||
|id=chr1:207112630..207112643,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;4.72e-17;1!UBERON:0008801;5.53e-17;1!UBERON:0006242;1.04e-16;1!UBERON:0001045;1.93e-16;1!UBERON:0006595;6.75e-08;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!3.30e-16!2;UBERON:0003127!1.94e-15!2;UBERON:0007023!7.18e-15!115;UBERON:0001007!4.28e-13!155;UBERON:0001555!4.28e-13!155;UBERON:0007026!4.28e-13!155;UBERON:0004921!8.47e-13!129;UBERON:0004185!8.47e-13!129;UBERON:0000166!5.74e-12!21;UBERON:0001044!5.88e-12!6;UBERON:0003293!5.88e-12!6;UBERON:0003294!5.88e-12!6;UBERON:0010047!5.88e-12!6;UBERON:0000167!5.88e-12!6;UBERON:0004119!1.03e-11!169;UBERON:0000925!1.03e-11!169;UBERON:0006595!1.03e-11!169;UBERON:0000078!4.98e-10!18;UBERON:0000161!2.77e-09!35;UBERON:0001736!5.59e-09!1;UBERON:0006298!5.59e-09!1;UBERON:0001831!6.03e-09!1;UBERON:0001567!6.03e-09!1;UBERON:0008801!6.03e-09!1;UBERON:0000160!6.13e-09!27;UBERON:0000165!7.61e-09!28;UBERON:0000930!7.61e-09!28;UBERON:0001154!1.27e-08!1;UBERON:0001153!1.27e-08!1;UBERON:0002372!3.79e-08!1;UBERON:0001961!3.79e-08!1;UBERON:0001744!3.79e-08!1;UBERON:0001735!3.79e-08!1;UBERON:0001155!6.75e-08!9;UBERON:0003408!2.36e-07!10;UBERON:0005409!7.87e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.35e-32;2!UBERON:0004921;3.46e-24;33!UBERON:0001044;4.91e-24;6!UBERON:0003293;4.91e-24;6!UBERON:0003294;4.91e-24;6!UBERON:0010047;4.91e-24;6!UBERON:0003408;4.91e-24;6!UBERON:0000167;4.91e-24;6!UBERON:0000160;3.60e-21;17!UBERON:0001736;4.72e-17;1!UBERON:0001831;5.53e-17;1!UBERON:0001567;5.53e-17;1!UBERON:0005409;1.36e-16;22!UBERON:0001154;1.93e-16;1!UBERON:0001153;1.93e-16;1!UBERON:0009854;1.93e-16;1!UBERON:0001155;9.99e-16;9!UBERON:0002108;2.37e-13;4!UBERON:0000059;5.49e-13;11!UBERON:0001555;6.23e-12;54!UBERON:0001041;1.13e-10;14!UBERON:0001007;1.73e-09;81!UBERON:0004089;3.71e-09;2!UBERON:0003127;6.93e-09;2!UBERON:0000341;6.93e-09;2!UBERON:0002365;3.15e-08;31!UBERON:0002330;3.15e-08;31!UBERON:0000161;5.22e-08;19!UBERON:0000166;5.22e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.35e-32,2;UBERON:0001044,4.91e-24,6;UBERON:0003293,4.91e-24,6;UBERON:0003294,4.91e-24,6;UBERON:0010047,4.91e-24,6;UBERON:0000167,4.91e-24,6;UBERON:0000160,3.31e-21,17;UBERON:0001736,4.72e-17,1;UBERON:0006298,4.72e-17,1;UBERON:0001831,5.53e-17,1;UBERON:0001567,5.53e-17,1;UBERON:0008801,5.53e-17,1;UBERON:0001154,2.63e-16,1;UBERON:0001153,2.63e-16,1;UBERON:0001045,2.63e-16,1;UBERON:0001155,9.03e-16,9;UBERON:0005409,1.03e-14,25;UBERON:0003408,1.07e-14,10;UBERON:0002108,2.37e-13,4;UBERON:0000059,5.06e-13,11;UBERON:0007023,1.63e-12,114;UBERON:0004921,6.00e-12,118;UBERON:0001007,1.12e-11,145;UBERON:0001555,1.12e-11,145;UBERON:0007026,1.12e-11,145;UBERON:0004119,1.73e-10,160;UBERON:0000925,1.73e-10,160;UBERON:0006595,1.73e-10,160;UBERON:0004089,3.71e-09,2;UBERON:0000341,5.94e-09,2;UBERON:0003127,8.74e-09,2;UBERON:0002365,2.70e-08,31;UBERON:0002330,2.70e-08,31;UBERON:0011216,4.38e-07,223;UBERON:0000166,5.51e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.41532103205343,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.3203820365721,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24131464053368,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1840884697998,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,0,0,0,0,0,0,0.870866991587845,0,0.0673520530145875,1.07583308089015,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@PIGR | |||
}} |
Revision as of 23:51, 10 January 2014
Short description: | p13@PIGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PIGR_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_M24559_5end |
EntrezGene: | PIGR |
HGNC: | 8968 |
UniProt: | P01833 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.35e-32 | 2 |
saliva-secreting gland | 4.91e-24 | 6 |
gland of oral region | 4.91e-24 | 6 |
gland of foregut | 4.91e-24 | 6 |
oral gland | 4.91e-24 | 6 |
oral cavity | 4.91e-24 | 6 |
intestine | 3.31e-21 | 17 |
submandibular gland | 4.72e-17 | 1 |
submandibular gland primordium | 4.72e-17 | 1 |
parotid gland | 5.53e-17 | 1 |
cheek | 5.53e-17 | 1 |
parotid gland primordium | 5.53e-17 | 1 |
vermiform appendix | 2.63e-16 | 1 |
caecum | 2.63e-16 | 1 |
midgut | 2.63e-16 | 1 |
colon | 9.03e-16 | 9 |
gastrointestinal system | 1.03e-14 | 25 |
gland of gut | 1.07e-14 | 10 |
small intestine | 2.37e-13 | 4 |
large intestine | 5.06e-13 | 11 |
adult organism | 1.63e-12 | 114 |
subdivision of digestive tract | 6.00e-12 | 118 |
digestive system | 1.12e-11 | 145 |
digestive tract | 1.12e-11 | 145 |
primitive gut | 1.12e-11 | 145 |
endoderm-derived structure | 1.73e-10 | 160 |
endoderm | 1.73e-10 | 160 |
presumptive endoderm | 1.73e-10 | 160 |
midface | 3.71e-09 | 2 |
throat | 5.94e-09 | 2 |
open tracheal system trachea | 8.74e-09 | 2 |
exocrine gland | 2.70e-08 | 31 |
exocrine system | 2.70e-08 | 31 |
organ system subdivision | 4.38e-07 | 223 |
oral opening | 5.51e-07 | 22 |