FFCP PHASE1:Hg19::chr1:207102584..207102587,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=280bp_to_AK026320_5end | |||
|coexpression_cluster_id=C435 | |||
|description=CAGE_peak_5_at_AK026320_5end | |||
|id=chr1:207102584..207102587,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;4.72e-17;1!UBERON:0006298;5.53e-17;1!UBERON:0001045;1.12e-16;1!UBERON:0006242;1.12e-16;1!UBERON:0006595;5.13e-07;86 | |||
|ontology_enrichment_disease=DOID:630!1.91e-07!1;DOID:0050177!1.91e-07!1;DOID:0050427!1.91e-07!1;DOID:12603!2.80e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.82e-14!2;UBERON:0003127!8.12e-14!2;UBERON:0000078!3.86e-12!18;UBERON:0004921!4.39e-12!129;UBERON:0004185!4.39e-12!129;UBERON:0001155!8.04e-12!9;UBERON:0007023!6.97e-11!115;UBERON:0001007!8.76e-11!155;UBERON:0001555!8.76e-11!155;UBERON:0007026!8.76e-11!155;UBERON:0001044!2.17e-10!6;UBERON:0003293!2.17e-10!6;UBERON:0003294!2.17e-10!6;UBERON:0010047!2.17e-10!6;UBERON:0000167!2.17e-10!6;UBERON:0000166!2.50e-10!21;UBERON:0000059!1.09e-09!11;UBERON:0004119!1.41e-09!169;UBERON:0000925!1.41e-09!169;UBERON:0006595!1.41e-09!169;UBERON:0006562!3.08e-09!11;UBERON:0001723!3.12e-09!3;UBERON:0001033!3.12e-09!3;UBERON:0010056!3.12e-09!3;UBERON:0001831!4.28e-08!1;UBERON:0001567!4.28e-08!1;UBERON:0008801!4.28e-08!1;UBERON:0001736!4.57e-08!1;UBERON:0006298!4.57e-08!1;UBERON:0001154!6.37e-08!1;UBERON:0001153!6.37e-08!1;UBERON:0000160!8.00e-08!27;UBERON:0000165!1.32e-07!28;UBERON:0000930!1.32e-07!28;UBERON:0002171!1.69e-07!1;UBERON:0006518!1.69e-07!1;UBERON:0008949!1.69e-07!1;UBERON:0000101!1.69e-07!1;UBERON:0002167!1.69e-07!1;UBERON:0002372!2.98e-07!1;UBERON:0001961!2.98e-07!1;UBERON:0001744!2.98e-07!1;UBERON:0001735!2.98e-07!1;UBERON:0001004!5.46e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.35e-32;2!UBERON:0004921;1.49e-18;33!UBERON:0001831;4.72e-17;1!UBERON:0001567;4.72e-17;1!UBERON:0001736;5.53e-17;1!UBERON:0001154;1.12e-16;1!UBERON:0001153;1.12e-16;1!UBERON:0009854;1.12e-16;1!UBERON:0001155;4.78e-16;9!UBERON:0000160;4.72e-14;17!UBERON:0000059;3.01e-13;11!UBERON:0001044;2.02e-11;6!UBERON:0003293;2.02e-11;6!UBERON:0003294;2.02e-11;6!UBERON:0010047;2.02e-11;6!UBERON:0003408;2.02e-11;6!UBERON:0000167;2.02e-11;6!UBERON:0005409;4.59e-11;22!UBERON:0004089;3.43e-09;2!UBERON:0006562;5.94e-09;2!UBERON:0001555;6.57e-09;54!UBERON:0003127;7.49e-09;2!UBERON:0000341;7.49e-09;2!UBERON:0001007;5.91e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.35e-32,2;UBERON:0001831,4.72e-17,1;UBERON:0001567,4.72e-17,1;UBERON:0008801,4.72e-17,1;UBERON:0001736,5.53e-17,1;UBERON:0006298,5.53e-17,1;UBERON:0001154,1.21e-16,1;UBERON:0001153,1.21e-16,1;UBERON:0001045,1.21e-16,1;UBERON:0001155,4.90e-16,9;UBERON:0000160,4.80e-14,17;UBERON:0000059,3.07e-13,11;UBERON:0001044,2.02e-11,6;UBERON:0003293,2.02e-11,6;UBERON:0003294,2.02e-11,6;UBERON:0010047,2.02e-11,6;UBERON:0000167,2.02e-11,6;UBERON:0007023,3.98e-10,114;UBERON:0005409,8.18e-10,25;UBERON:0004089,3.43e-09,2;UBERON:0003127,7.49e-09,2;UBERON:0000341,8.09e-09,2;UBERON:0001007,9.94e-08,145;UBERON:0001555,9.94e-08,145;UBERON:0007026,9.94e-08,145;UBERON:0004921,1.23e-07,118;UBERON:0003408,3.33e-07,10;UBERON:0004119,6.36e-07,160;UBERON:0000925,6.36e-07,160;UBERON:0006595,6.36e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,5.52567831062295,0,0,0.246169610922139,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.96209544862804,6.89969003126046,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,5.76323085796252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7372796068586,0,0,2.17196126987312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.48915739187391,0,0,0,0,0,0,0,0,0,0,0,1.78553938605658,0,0,0,16.5142542025635,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49263787330687,0,0,0,0,0,0,0.217716747896961,0.684466602170562,0.0673520530145875,1.57788851863888,0.665320713092027,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p5@AK026320 | |||
}} |
Revision as of 23:50, 10 January 2014
Short description: | p5@AK026320 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_AK026320_5end |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | 280bp_to_AK026320_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.35e-32 | 2 |
parotid gland | 4.72e-17 | 1 |
cheek | 4.72e-17 | 1 |
parotid gland primordium | 4.72e-17 | 1 |
submandibular gland | 5.53e-17 | 1 |
submandibular gland primordium | 5.53e-17 | 1 |
vermiform appendix | 1.21e-16 | 1 |
caecum | 1.21e-16 | 1 |
midgut | 1.21e-16 | 1 |
colon | 4.90e-16 | 9 |
intestine | 4.80e-14 | 17 |
large intestine | 3.07e-13 | 11 |
saliva-secreting gland | 2.02e-11 | 6 |
gland of oral region | 2.02e-11 | 6 |
gland of foregut | 2.02e-11 | 6 |
oral gland | 2.02e-11 | 6 |
oral cavity | 2.02e-11 | 6 |
adult organism | 3.98e-10 | 114 |
gastrointestinal system | 8.18e-10 | 25 |
midface | 3.43e-09 | 2 |
open tracheal system trachea | 7.49e-09 | 2 |
throat | 8.09e-09 | 2 |
digestive system | 9.94e-08 | 145 |
digestive tract | 9.94e-08 | 145 |
primitive gut | 9.94e-08 | 145 |
subdivision of digestive tract | 1.23e-07 | 118 |
gland of gut | 3.33e-07 | 10 |
endoderm-derived structure | 6.36e-07 | 160 |
endoderm | 6.36e-07 | 160 |
presumptive endoderm | 6.36e-07 | 160 |