FFCP PHASE1:Hg19::chr1:162337122..162337136,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:162337122..162337136,+ | |||
|id=chr1:162337122..162337136,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.94e-12!3;CL:0000349!6.63e-12!3;CL:0002577!6.63e-12!3;CL:0002536!1.87e-08!2;CL:0002537!1.91e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.58e-44;19!CL:0002541;1.07e-26;3!CL:0002577;7.28e-26;3!CL:0002537;4.69e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.13e-44,19;CL:0002541,1.12e-26,3;CL:0002577,7.61e-26,3;CL:0002537,4.61e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.61e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;2.70e-15;14!DOID:3151;1.98e-10;1!DOID:3149;1.98e-10;1!DOID:4362;5.79e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.05e-15,14;DOID:3151,1.98e-10,1;DOID:3149,1.98e-10,1;DOID:4362,5.31e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.63e-36!14;UBERON:0000158!1.63e-36!14;UBERON:0000478!1.04e-27!24;UBERON:0003124!7.32e-26!7;UBERON:0001987!2.35e-15!4;UBERON:0004340!2.35e-15!4;UBERON:0000305!2.11e-13!7;UBERON:0004923!7.20e-13!57;UBERON:0000476!2.94e-12!3;UBERON:0000920!2.94e-12!3;UBERON:0004871!1.11e-11!8;UBERON:0000995!5.47e-10!21;UBERON:0003134!1.32e-09!37;UBERON:0000474!1.32e-09!37;UBERON:0005795!1.80e-09!22;UBERON:0003975!1.80e-09!22;UBERON:0003100!1.89e-08!41;UBERON:0003133!3.18e-08!48;UBERON:0004175!3.58e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.04e-41;24!UBERON:0001987;7.13e-34;4!UBERON:0005631;4.00e-31;10!UBERON:0000158;4.00e-31;10!UBERON:0003124;1.07e-26;3!UBERON:0000920;1.07e-26;3!UBERON:0000305;5.41e-12;7!UBERON:0000997;4.85e-10;1!UBERON:0005056;4.85e-10;1!UBERON:0004176;4.85e-10;1!UBERON:0003343;1.62e-09;4!UBERON:0004785;1.62e-09;4!UBERON:0000474;1.82e-09;37!UBERON:0003100;7.99e-08;41!UBERON:0000002;9.02e-07;6!UBERON:0001560;9.02e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.78e-60,14;UBERON:0000158,6.78e-60,14;UBERON:0003124,7.26e-59,7;UBERON:0000478,9.78e-42,24;UBERON:0001987,5.51e-34,4;UBERON:0004340,5.51e-34,4;UBERON:0000920,1.12e-26,3;UBERON:0004923,9.10e-17,66;UBERON:0000995,2.77e-14,21;UBERON:0005795,1.29e-13,22;UBERON:0003975,1.29e-13,22;UBERON:0000305,5.41e-12,7;UBERON:0004175,6.24e-12,25;UBERON:0003134,1.21e-10,37;UBERON:0000474,1.21e-10,37;UBERON:0004871,1.47e-10,8;UBERON:0000997,5.30e-10,1;UBERON:0005056,5.30e-10,1;UBERON:0003100,1.56e-09,41;UBERON:0003343,2.06e-09,4;UBERON:0004785,2.06e-09,4;UBERON:0003133,4.92e-08,48;UBERON:0000002,8.39e-07,6;UBERON:0001560,8.39e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,3.16520373874144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34097284313154,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6785135102055,0,0,0,0,3.58116727106535,0.593929361665277,5.52889263778618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,2.83665218121524,0,0,0,0,0,0,0,0,0,0,13.5241031950245,0.230850775511391,0,0,0,10.1042055887468,2.87101043758728,1.37396390102793,6.39641731222362,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,2.73930466504926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6457947301882,1.74118413160805,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0.864542502924636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39217125277945,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,4.46838880439127,0,0.7520696820681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15924980702256,0,0,1.03973099535304,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86274977341542,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0.5388164241167,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:162337122..162337136,+ | |||
}} |
Revision as of 21:57, 10 January 2014
Short description: | p@chr1:162337122..162337136, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:162337122..162337136, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.13e-44 | 19 |
chorionic membrane mesenchymal stem cell | 1.12e-26 | 3 |
placental epithelial cell | 7.61e-26 | 3 |
amnion mesenchymal stem cell | 4.61e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.78e-60 | 14 |
membranous layer | 6.78e-60 | 14 |
chorion | 7.26e-59 | 7 |
extraembryonic structure | 9.78e-42 | 24 |
placenta | 5.51e-34 | 4 |
allantois | 5.51e-34 | 4 |
egg chorion | 1.12e-26 | 3 |
organ component layer | 9.10e-17 | 66 |
uterus | 2.77e-14 | 21 |
embryonic uterus | 1.29e-13 | 22 |
internal female genitalia | 1.29e-13 | 22 |
amnion | 5.41e-12 | 7 |
internal genitalia | 6.24e-12 | 25 |
female reproductive organ | 1.21e-10 | 37 |
female reproductive system | 1.21e-10 | 37 |
somatic layer of lateral plate mesoderm | 1.47e-10 | 8 |
mammalian vulva | 5.30e-10 | 1 |
external female genitalia | 5.30e-10 | 1 |
female organism | 1.56e-09 | 41 |
mucosa of oral region | 2.06e-09 | 4 |
respiratory system mucosa | 2.06e-09 | 4 |
reproductive organ | 4.92e-08 | 48 |
uterine cervix | 8.39e-07 | 6 |
neck of organ | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.05e-15 | 14 |
skin squamous cell carcinoma | 1.98e-10 | 1 |
keratoacanthoma | 1.98e-10 | 1 |
cervical cancer | 5.31e-08 | 5 |