FFCP PHASE1:Hg19::chr1:162336686..162336732,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=400793,9722 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34351,16859 | |||
|TSSclassifier=weak | |||
|UniProt=F8W6W0 | |||
|association_with_transcript=0bp_to_ENST00000420220,ENST00000454693_5end | |||
|description=CAGE_peak_1_at_C1orf226_5end,CAGE_peak_3_at_NOS1AP_5end | |||
|id=chr1:162336686..162336732,+ | |||
|ontology_enrichment_celltype=CL:0002541!9.14e-09!3;CL:0000349!1.09e-08!3;CL:0002577!1.09e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.92e-34;19!CL:0002537;7.99e-16;5!CL:0002541;4.22e-12;3!CL:0002577;5.13e-12;3!CL:0000313;1.06e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.48e-34,19;CL:0002537,7.80e-16,5;CL:0002541,4.46e-12,3;CL:0002577,4.46e-12,3;CL:0000313,1.36e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.06e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.15e-14;14!DOID:3151;3.74e-10;1!DOID:3149;3.74e-10;1!DOID:2152;1.06e-09;1!DOID:4362;9.44e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.03e-14,14;DOID:3151,3.74e-10,1;DOID:3149,3.74e-10,1;DOID:2152,1.36e-09,1;DOID:4362,8.53e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.34e-25!14;UBERON:0000158!2.34e-25!14;UBERON:0000478!1.39e-18!24;UBERON:0003124!3.81e-18!7;UBERON:0001987!4.41e-11!4;UBERON:0004340!4.41e-11!4;UBERON:0004923!6.57e-10!57;UBERON:0000305!1.28e-09!7;UBERON:0000476!9.14e-09!3;UBERON:0000920!9.14e-09!3;UBERON:0004871!2.39e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.59e-33;24!UBERON:0005631;1.46e-29;10!UBERON:0000158;1.46e-29;10!UBERON:0000305;2.46e-19;7!UBERON:0001987;2.85e-19;4!UBERON:0003124;4.22e-12;3!UBERON:0000920;4.22e-12;3!UBERON:0000474;4.37e-10;37!UBERON:0000997;6.31e-10;1!UBERON:0005056;6.31e-10;1!UBERON:0004176;6.31e-10;1!UBERON:0004911;1.06e-09;1!UBERON:0003343;4.98e-09;4!UBERON:0004785;4.98e-09;4!UBERON:0003100;4.86e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.46e-47,14;UBERON:0000158,9.46e-47,14;UBERON:0000478,6.59e-33,24;UBERON:0003124,1.64e-29,7;UBERON:0000305,2.04e-19,7;UBERON:0001987,2.76e-19,4;UBERON:0004340,2.76e-19,4;UBERON:0004871,5.05e-17,8;UBERON:0004923,2.31e-13,66;UBERON:0000920,4.46e-12,3;UBERON:0003134,2.26e-10,37;UBERON:0000474,2.26e-10,37;UBERON:0000997,6.31e-10,1;UBERON:0005056,6.31e-10,1;UBERON:0000995,6.90e-10,21;UBERON:0004911,1.36e-09,1;UBERON:0005795,1.98e-09,22;UBERON:0003975,1.98e-09,22;UBERON:0003100,2.77e-09,41;UBERON:0003343,5.19e-09,4;UBERON:0004785,5.19e-09,4;UBERON:0004175,2.82e-08,25;UBERON:0003133,8.12e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.873765488520689,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,1.08524321078289,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,3.32870879020994,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,6.17563783347125,0,0,0,0,4.7748896947538,1.18785872333055,9.82914246717543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,4.25497827182285,0,0,0,0,0,0,0,0,0,0,7.80772967960178,0,0,0.23056390438806,0.179515288819544,6.51884231532048,2.23300811812344,0.824378340616761,2.13213910407454,0,0,0,0.676786981851542,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50765028106137,2.61177619741208,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,2.4495370916198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,11.404779378375,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,0,0,0,0,0,0.213574825135389,0,0,0,0.395223263795889,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47221577751538,0,0,1.15525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12885688390333,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339777236026,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@C1orf226,p3@NOS1AP | |||
}} |
Revision as of 21:57, 10 January 2014
Short description: | p1@C1orf226, p3@NOS1AP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C1orf226_5end, CAGE_peak_3_at_NOS1AP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000420220, ENST00000454693_5end |
EntrezGene: | 400793,9722 |
HGNC: | 16859&submit=Submit 34351, 16859 |
UniProt: | F8W6W0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.48e-34 | 19 |
amnion mesenchymal stem cell | 7.80e-16 | 5 |
chorionic membrane mesenchymal stem cell | 4.46e-12 | 3 |
placental epithelial cell | 4.46e-12 | 3 |
serous secreting cell | 1.36e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.46e-47 | 14 |
membranous layer | 9.46e-47 | 14 |
extraembryonic structure | 6.59e-33 | 24 |
chorion | 1.64e-29 | 7 |
amnion | 2.04e-19 | 7 |
placenta | 2.76e-19 | 4 |
allantois | 2.76e-19 | 4 |
somatic layer of lateral plate mesoderm | 5.05e-17 | 8 |
organ component layer | 2.31e-13 | 66 |
egg chorion | 4.46e-12 | 3 |
female reproductive organ | 2.26e-10 | 37 |
female reproductive system | 2.26e-10 | 37 |
mammalian vulva | 6.31e-10 | 1 |
external female genitalia | 6.31e-10 | 1 |
uterus | 6.90e-10 | 21 |
epithelium of female gonad | 1.36e-09 | 1 |
embryonic uterus | 1.98e-09 | 22 |
internal female genitalia | 1.98e-09 | 22 |
female organism | 2.77e-09 | 41 |
mucosa of oral region | 5.19e-09 | 4 |
respiratory system mucosa | 5.19e-09 | 4 |
internal genitalia | 2.82e-08 | 25 |
reproductive organ | 8.12e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.03e-14 | 14 |
skin squamous cell carcinoma | 3.74e-10 | 1 |
keratoacanthoma | 3.74e-10 | 1 |
ovary epithelial cancer | 1.36e-09 | 1 |
cervical cancer | 8.53e-08 | 5 |