FFCP PHASE1:Hg19::chr1:160990922..160990949,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14685 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y624 | |||
|association_with_transcript=18bp_to_ENST00000368026_5end | |||
|coexpression_cluster_id=C3893 | |||
|description=CAGE_peak_1_at_F11R_5end | |||
|id=chr1:160990922..160990949,- | |||
|ontology_enrichment_celltype=CL:0000066!6.69e-47!254;CL:0000076!2.97e-14!62;CL:0000223!1.85e-13!59;CL:0002076!3.06e-13!43;CL:0000115!3.19e-10!35;CL:0002139!8.68e-10!24;CL:0002078!3.13e-09!44;CL:0000213!2.63e-08!57;CL:0000215!2.63e-08!57;CL:0000071!1.44e-07!18;CL:0002546!1.44e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.71e-11;42!CL:0002139;8.20e-10;24!CL:0000115;5.05e-09;36!CL:0000076;9.41e-08;63!CL:0000071;1.35e-07;18!CL:0002251;2.10e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.73e-48,253;CL:0002076,2.33e-14,42;CL:0000223,2.83e-14,58;CL:0000076,1.79e-13,63;CL:0000115,1.40e-10,36;CL:0002139,8.16e-10,24;CL:0002078,1.13e-09,45;CL:0000213,9.57e-09,58;CL:0000215,9.57e-09,58;CL:0000071,1.38e-07,18;CL:0002546,1.38e-07,18;CL:0002251,2.13e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;2.96e-08;58!CL:0002546;1.35e-07;18 | |||
|ontology_enrichment_disease=DOID:305!1.79e-15!106;DOID:0050687!1.38e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.47e-15,106;DOID:0050687,1.11e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.01e-12!169;UBERON:0000925!4.01e-12!169;UBERON:0006595!4.01e-12!169;UBERON:0004921!4.00e-10!129;UBERON:0004185!4.00e-10!129;UBERON:0000466!1.74e-09!126;UBERON:0001004!7.60e-09!72;UBERON:0001041!9.79e-09!98;UBERON:0005911!1.07e-08!82;UBERON:0001007!1.61e-08!155;UBERON:0001555!1.61e-08!155;UBERON:0007026!1.61e-08!155;UBERON:0000077!1.95e-08!130;UBERON:0000464!9.11e-08!104;UBERON:0000065!1.22e-07!53;UBERON:0001986!1.44e-07!18;UBERON:0004638!1.44e-07!18;UBERON:0004852!1.44e-07!18;UBERON:0005177!2.15e-07!107;UBERON:0008947!9.74e-07!38;UBERON:0003258!9.74e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.35e-07;18!UBERON:0001986;1.35e-07;18!UBERON:0004852;1.35e-07;18!UBERON:0006554;9.03e-07;30!UBERON:0001008;9.03e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.73e-13,160;UBERON:0000925,2.73e-13,160;UBERON:0006595,2.73e-13,160;UBERON:0004921,3.64e-12,118;UBERON:0001041,5.40e-11,87;UBERON:0001007,7.45e-10,145;UBERON:0001555,7.45e-10,145;UBERON:0007026,7.45e-10,145;UBERON:0005177,4.56e-09,101;UBERON:0005911,1.00e-08,82;UBERON:0001004,7.14e-08,74;UBERON:0004638,1.38e-07,18;UBERON:0001986,1.38e-07,18;UBERON:0004852,1.38e-07,18;UBERON:0001008,3.11e-07,48;UBERON:0006554,3.74e-07,47;UBERON:0000065,4.32e-07,54;UBERON:0008947,9.37e-07,38;UBERON:0003258,9.37e-07,38 | |||
|phase1_expression=1.45342703416445,7.06531728840244,5.07435854745496,3.00219895059391,3.12872766099101,1.74467704820074,5.06599756336621,5.05375898741465,9.66386824339403,143.26288498038,222.598572583204,252.081343438219,197.561466693112,0,0,16.1358035148426,13.8619741445515,7.30310090387373,14.6379839637152,3.93987385845721,0.612002073732759,2.5076377718247,7.44213566540748,10.676205155685,7.90918629447258,20.4787927404509,15.7633131743896,16.6079748571863,35.7961491932503,25.332740274416,21.0549927709863,90.1032799989349,137.048693044104,189.314053205395,3.95082722959538,10.2361847390943,16.1480241634166,13.2958898047651,19.0517225096635,15.8417935622572,29.7807580739099,50.2035182329418,25.4999811957845,67.1739863161589,51.3911283416781,49.9723166046901,51.599246193062,32.0710952657024,24.4668033007132,32.509240332403,25.6160706529101,23.4117407589699,45.161684176497,32.9197188627751,23.0225027210381,60.2375486536335,45.5753270596602,36.6299279645488,47.136919425119,44.609134763577,31.9668562899521,36.9433456209122,26.3292028060554,18.3276642729058,28.4405053856012,19.8584828641899,19.9303119678584,37.6872997885115,27.6385946762707,26.4970390540242,29.0591761264017,23.9380463391917,24.684066220389,14.7878700418359,16.3705310973084,17.820984868212,34.3725611308275,34.991216032071,35.1989034866605,12.8255734683562,11.139333923149,12.2384983022305,7.03984977845291,7.09980194640771,4.44754626931777,9.81479511902967,3.60356388332411,5.74752439954483,7.27149360063348,1.90810750907073,13.6611112586268,17.0298784917572,19.4959346343867,34.3645454305467,16.2547483264645,10.7987474757782,12.982844827513,11.3973121197258,16.0369169219617,10.6999357050034,6.19252306603822,5.20792586308207,9.74133642039557,5.01347055983281,8.54357131677028,6.42448294292501,2.97884250141517,7.94166182299186,3.25148368899696,7.89301942097645,4.97430032014527,8.98389565778663,9.78691316869599,8.56130649887082,10.4535523804977,7.47841661803937,8.04763036564035,12.026960591892,6.07247260846807,8.60126618675061,7.1619179924206,5.70271226669025,12.6483100025329,16.2542996166111,9.99445812418767,11.6020853501568,4.92676798152628,14.5156855121807,12.3022490060413,7.96534221355394,14.6284119788377,34.2057438448854,15.5992325449107,0,0,0.289693037921647,0,1.94653948121054,15.314640380579,10.4212816807405,12.4725395684239,54.7492535580439,232.420393930642,142.010441586436,32.4547393654683,29.0796661289776,31.7769525640088,39.1124623860761,39.4676488438288,40.117410143593,98.5861540538857,90.3246324861431,195.440102405076,122.67182339751,147.244302109677,79.2339960787394,90.9128104435126,116.545958385367,131.633517194083,171.376953735511,153.880799135694,130.006530077866,180.117798470549,100.004357854076,131.242995556845,81.4413521950808,50.5191088408882,42.1166937007625,64.392987735671,130.998661020402,78.5935481461447,90.9284880308836,81.4338554711483,300.032707874064,0,4.93858995491861,4.50191214764944,7.17091551872034,1.77334191099179,16.8203280042692,23.4847790605351,8.14002909776628,11.2035972743916,34.6206427219098,26.6442902074938,8.1733010928263,6.91411109375999,3.28050004567315,0,17.1141546463335,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0,5.46096817162816,4.31170885089743,0,0.125118519871964,0,0,0,0,28.6983423394853,0,0.213557388818567,0,0,0,0,0,0.337552664482532,0.389748020644795,0.252433774244115,0,0.969876340912871,0.355009592516614,0,0,175.674115525437,140.46425210428,154.587676914673,146.124499943255,129.746643186734,154.30555613072,89.4594904782647,105.470115666013,139.056373807891,0,1.92972281457866,0,0.464367928031979,0,41.643993614025,45.8550357012437,44.1050184686772,45.7719986839435,39.8719382689103,41.0478171062197,46.5168013152567,45.1309369788296,38.8594628515854,124.010116376941,100.974077138481,27.9870327705352,16.1709582524096,187.59745153631,96.3170672344073,86.8461162821664,0,159.024051036246,19.2155947534349,143.992374456117,162.982542223548,72.8835049984324,168.14061640789,0.977424915930974,1.03993478527958,27.4229549848019,18.4329343910372,15.3805389448926,98.8910167163356,87.967247389556,82.9508103742848,69.5379870204162,97.0089363167206,46.5350141505181,69.9672752766321,62.1278258366884,137.788735960562,192.339536787694,165.876863773592,98.1561408823217,114.509771774501,90.4783122829898,18.2285398021499,17.6096868026452,14.0983118567725,20.4650333852085,13.634182810049,12.4455872812651,42.4007152369688,43.3704554677174,41.0573870454493,27.8662505226007,49.2562614864025,46.8755349514148,1.90622843387113,4.3596006883328,0.5867062865676,4.65378176728,7.15312891703765,2.535908257668,0.26593811658487,0,0,1.41849132023278,0,7.43485567022367,36.3556475612267,17.2880470723961,5.86325131728723,7.10783897485092,6.33561498346743,55.4648453789638,40.9620725542138,54.285334211857,109.461402577071,106.980760475043,73.7918788190611,0,0,0,0,0.821905290201534,0.537182889719687,8.51847094350807,15.1713685355484,15.5251853898852,11.0375011200584,4.31960861178188,1.301398538576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| |||
|short_description=p1@F11R | |||
}} |
Revision as of 21:50, 10 January 2014
Short description: | p1@F11R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_F11R_5end |
Coexpression cluster: | C3893_chorionic_testicular_squamous_clear_Esophageal_choriocarcinoma_Amniotic |
Association with transcript: | 18bp_to_ENST00000368026_5end |
EntrezGene: | F11R |
HGNC: | 14685 |
UniProt: | Q9Y624 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.73e-48 | 253 |
endo-epithelial cell | 2.33e-14 | 42 |
endodermal cell | 2.83e-14 | 58 |
squamous epithelial cell | 1.79e-13 | 63 |
endothelial cell | 1.40e-10 | 36 |
endothelial cell of vascular tree | 8.16e-10 | 24 |
meso-epithelial cell | 1.13e-09 | 45 |
lining cell | 9.57e-09 | 58 |
barrier cell | 9.57e-09 | 58 |
blood vessel endothelial cell | 1.38e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.38e-07 | 18 |
epithelial cell of alimentary canal | 2.13e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.73e-13 | 160 |
endoderm | 2.73e-13 | 160 |
presumptive endoderm | 2.73e-13 | 160 |
subdivision of digestive tract | 3.64e-12 | 118 |
foregut | 5.40e-11 | 87 |
digestive system | 7.45e-10 | 145 |
digestive tract | 7.45e-10 | 145 |
primitive gut | 7.45e-10 | 145 |
trunk region element | 4.56e-09 | 101 |
endo-epithelium | 1.00e-08 | 82 |
respiratory system | 7.14e-08 | 74 |
blood vessel endothelium | 1.38e-07 | 18 |
endothelium | 1.38e-07 | 18 |
cardiovascular system endothelium | 1.38e-07 | 18 |
renal system | 3.11e-07 | 48 |
urinary system structure | 3.74e-07 | 47 |
respiratory tract | 4.32e-07 | 54 |
respiratory primordium | 9.37e-07 | 38 |
endoderm of foregut | 9.37e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.47e-15 | 106 |
cell type cancer | 1.11e-07 | 143 |