FFCP PHASE1:Hg19::chr1:151735937..151735998,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65005 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14277 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SZR1 | |||
|association_with_transcript=0bp_to_ENST00000368829,ENST00000462783,ENST00000467306_5end | |||
|description=CAGE_peak_1_at_MRPL9_5end | |||
|id=chr1:151735937..151735998,- | |||
|ontology_enrichment_celltype=CL:0000012!7.95e-32!682;CL:0000548!8.66e-31!679;CL:0000004!8.66e-31!679;CL:0000255!8.66e-31!679;CL:0000003!5.40e-25!722;CL:0000066!1.34e-22!254;CL:0000144!7.38e-15!625;CL:0000063!1.68e-14!578;CL:0002321!1.21e-09!248;CL:0000220!2.13e-09!246;CL:0002371!7.87e-09!591;CL:0000076!2.14e-07!62;CL:0000542!2.60e-07!53;CL:0000051!2.60e-07!53;CL:0000213!3.36e-07!57;CL:0000215!3.36e-07!57;CL:1000449!4.58e-07!16;CL:1000497!4.60e-07!18;CL:0002518!4.60e-07!18;CL:0000838!6.61e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:1000449;8.28e-08;15!CL:1000497;9.63e-08;17!CL:0002518;9.63e-08;17!CL:0002681;6.57e-07;12!CL:0002584;6.57e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.50e-23,253;CL:0002321,9.15e-10,250;CL:1000449,8.27e-08,15;CL:1000497,9.71e-08,17;CL:0002518,9.71e-08,17;CL:0000213,1.49e-07,58;CL:0000215,1.49e-07,58;CL:0000542,2.60e-07,53;CL:0000051,2.60e-07,53;CL:0000076,4.14e-07,63;CL:0002681,6.40e-07,12;CL:0002584,6.40e-07,12;CL:0000838,6.61e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.66e-25!235;DOID:14566!8.45e-25!239;DOID:0050687!4.02e-14!143;DOID:305!5.04e-14!106;DOID:0050686!4.85e-12!137;DOID:2531!1.79e-08!51;DOID:0060083!1.79e-08!51;DOID:1240!1.12e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.66e-25,235;DOID:14566,8.45e-25,239;DOID:0050687,4.02e-14,143;DOID:305,5.04e-14,106;DOID:0050686,4.85e-12,137;DOID:2531,1.79e-08,51;DOID:0060083,1.79e-08,51;DOID:1240,1.12e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004211!4.58e-07!16;UBERON:0001285!4.58e-07!16;UBERON:0007684!4.58e-07!16;UBERON:0003220!4.58e-07!16;UBERON:0004208!4.58e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.28e-08;15!UBERON:0004819;8.28e-08;15!UBERON:0001285;8.28e-08;15!UBERON:0007684;8.28e-08;15!UBERON:0000353;1.92e-07;15!UBERON:0006554;5.09e-07;30!UBERON:0001008;5.09e-07;30!UBERON:0000072;6.56e-07;37!UBERON:0001225;6.57e-07;12!UBERON:0008987;6.57e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,8.27e-08,15;UBERON:0009773,8.27e-08,15;UBERON:0001231,8.27e-08,15;UBERON:0001285,8.27e-08,15;UBERON:0007684,8.27e-08,15;UBERON:0004208,8.27e-08,15;UBERON:0000353,1.82e-07,15;UBERON:0001225,6.40e-07,12;UBERON:0008987,6.40e-07,12;UBERON:0006555,8.88e-07,16;UBERON:0004819,8.88e-07,16 | |||
|phase1_expression=44.1478461627453,40.2508984915048,43.977774077943,54.0395811106904,38.885615215174,34.8935409640147,68.3909671054438,56.223068734988,61.6398082551619,118.93522526673,145.142642938265,104.633417250353,91.7909084235018,76.4876061293088,52.6921827407386,52.4413614232385,63.2829254425176,56.9641870502151,56.1122718609083,100.220541274505,96.4923269585317,64.258217903008,51.8087136707213,66.247221735276,55.2387614217132,67.9315177099287,68.143489243455,73.5945805282901,53.8909059282998,70.6246092498871,49.5411594611443,67.1177493869617,65.3616843748803,79.1273581756926,68.4035381124063,47.4845236507988,74.868112030386,27.6997704265939,33.0898338325734,34.5047284438204,32.9155747132689,31.74157926986,27.3030101692238,16.1392045045317,13.9814099164859,16.7383002219593,14.1781712512468,10.6903650885675,10.5300166104335,10.6446185159196,16.3942852178624,21.2834006899727,12.0660988257816,18.0735711403471,37.9194162464157,12.4239944098119,15.2827444032394,17.0789848178264,10.4068523406107,12.8371610830437,19.1801137739712,15.8328624089624,16.5554835825954,20.0325632750366,11.3181603065148,9.07816359505824,10.5879782329248,16.3311632416883,18.251902144707,19.9813737128707,12.1079900526674,19.1504370713534,17.4054313092486,36.335909245654,41.2452341932184,40.4641185831166,33.810917975095,35.4417467105955,30.2164102990511,42.1818860737048,40.3800854714153,41.4647629045719,47.5189860045571,73.7287125203877,63.1551570243124,55.4749289336459,59.2586060813298,63.7975208349476,67.4265770240559,59.1513327811926,70.5824081695716,91.6090015418664,72.2496401156683,66.0856642895129,95.8469642698427,62.9487962612434,98.945014367258,81.7462386518263,71.5493216518292,64.7011737161924,110.813570655421,94.6895611469466,74.0341567950063,70.5228192083149,71.8838414238603,76.6507275259329,72.3046316252592,49.3151580943849,51.5035016337118,51.1401883317433,60.5206538951008,68.6833313192074,72.5121293862476,68.7579928190563,60.6306038068865,64.8129440230079,74.7279962523746,77.6598026790744,70.0864546894023,76.1371340234591,76.176764101201,85.5406840003537,65.1990265606756,65.6571315222166,64.9639778072198,67.2447395805008,76.3649037136573,96.3680232614221,75.1506950151656,80.5223685588362,75.5801285573281,83.1669066032509,56.2595272111533,61.0832167529917,62.1659009188503,71.6990268856077,69.1898773934456,43.7971383272372,60.7858874364956,60.0886667123548,56.7412715577594,40.8654715552863,104.188452451667,100.48258399458,46.085729898965,60.2488891055465,49.5933192735367,64.6309591867477,68.0673943828352,72.8056702605947,94.0146186844515,98.0667438420982,83.3137203858226,69.5328768566532,75.5098985177831,85.2865930014209,92.5847701758071,52.2001853522044,48.7399779880793,50.8775331402299,101.512987911505,109.479183223466,90.7910854079191,92.283433166813,70.4823494657131,75.6368698566156,54.7851669207854,61.3732568634106,91.9899824795299,76.8905184250184,91.6008719652036,11.8602375692457,15.511210565933,93.3241271585023,31.3092329568051,62.8087337856316,30.0568840446007,36.1414142143505,48.5895683611749,56.0677600142307,69.3868472243082,56.4868685875296,44.5031780621666,57.1173249575477,54.1058899305548,65.5377661702553,46.6702498828799,165.665252306494,57.7496142136093,104.396343342634,59.6300235401686,77.7416381021723,76.4040297417581,69.6636001243153,51.2426969849782,61.6628272905075,52.4894968372888,47.5201142912821,53.9041905827254,129.2429133952,76.8921411743375,70.3644956327997,66.9384081315008,56.7981436742575,54.4332249892239,63.4429737303971,44.9211796130724,79.5159603951747,50.0497083571925,68.7654791995787,70.9971868884532,51.3155774304328,69.3543521774694,50.2399053088977,67.9326525610303,39.6624380766976,71.5187617883198,48.46728465487,62.6859809754059,47.0390025342743,45.08621824961,73.0452712150392,99.1929465016353,61.843473012255,62.4588616153011,54.7796777192997,70.9886969674245,76.3371465531755,71.6916627504929,67.8979910350676,64.0894961224096,53.651671784147,78.224766164908,67.540298510253,74.5928575303395,58.5103589320294,46.2002868268535,110.143630837095,109.411463860688,106.526875208499,111.176324514253,112.425793151682,110.805379124882,127.415586211355,112.827342447074,122.349595908952,98.1746754650782,93.9619884483087,86.8421163909254,73.504355692771,43.0967118394225,58.9696330006576,36.6289742142471,65.3365387133683,70.8413406008334,59.0193267426928,43.2416124509985,89.9214026060956,70.8729255501998,67.0340342947754,189.946241995919,114.392826380754,89.4854320556694,54.9510119581864,49.4290602732809,83.1550739103785,75.9296240625642,58.5982788882563,176.215580744918,168.263287770595,39.1485039678962,40.0147293388096,35.3742166247173,78.7364205488927,40.9876392805217,61.5303922031957,70.2138817990331,81.0868688453954,60.9578459872686,44.3396914106349,36.2759548134491,30.891889215575,40.0653470499153,30.1719415889048,40.194167086943,67.2299628982569,60.9530725492244,46.1895604261304,47.9176115997488,39.945626693241,31.7267340219942,111.570428923634,91.5516144549888,77.6652446843861,67.47983562556,5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| |||
|short_description=p1@MRPL9 | |||
}} |
Revision as of 20:51, 10 January 2014
Short description: | p1@MRPL9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368829, ENST00000462783, ENST00000467306_5end |
EntrezGene: | MRPL9 |
HGNC: | 14277 |
UniProt: | Q5SZR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.50e-23 | 253 |
embryonic cell | 9.15e-10 | 250 |
epithelial cell of nephron | 8.27e-08 | 15 |
kidney cell | 9.71e-08 | 17 |
kidney epithelial cell | 9.71e-08 | 17 |
lining cell | 1.49e-07 | 58 |
barrier cell | 1.49e-07 | 58 |
lymphocyte | 2.60e-07 | 53 |
common lymphoid progenitor | 2.60e-07 | 53 |
squamous epithelial cell | 4.14e-07 | 63 |
kidney cortical cell | 6.40e-07 | 12 |
renal cortical epithelial cell | 6.40e-07 | 12 |
lymphoid lineage restricted progenitor cell | 6.61e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 8.27e-08 | 15 |
renal tubule | 8.27e-08 | 15 |
nephron tubule | 8.27e-08 | 15 |
nephron | 8.27e-08 | 15 |
uriniferous tubule | 8.27e-08 | 15 |
nephrogenic mesenchyme | 8.27e-08 | 15 |
parenchyma | 1.82e-07 | 15 |
cortex of kidney | 6.40e-07 | 12 |
renal parenchyma | 6.40e-07 | 12 |
excretory tube | 8.88e-07 | 16 |
kidney epithelium | 8.88e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.66e-25 | 235 |
disease of cellular proliferation | 8.45e-25 | 239 |
cell type cancer | 4.02e-14 | 143 |
carcinoma | 5.04e-14 | 106 |
organ system cancer | 4.85e-12 | 137 |
hematologic cancer | 1.79e-08 | 51 |
immune system cancer | 1.79e-08 | 51 |
leukemia | 1.12e-07 | 39 |