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FFCP PHASE1:Mm9::chr9:65974560..65974588,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=68250|HGNC=|MCL_coexpression_id=1558|UniProt=Q9DCL2|association_with_transcript=142bp_to_ENSMUST00000034945,NM_026635,uc009qel.1_5end|description=CAGE_peak_3_at_Fam96a_5end|id=chr9:65974560..65974588,+|ontology_enrichment_celltype=CL:0000063!2.45e-13!66;CL:0002320!9.02e-09!46;CL:0000134!9.02e-09!46;CL:0000988!5.94e-08!32;CL:0002032!5.94e-08!32;CL:0000037!5.94e-08!32;CL:0000566!5.94e-08!32;CL:0000837!5.94e-08!32|ontology_enrichment_celltype_v019_2=CL:0002320,7.83e-09,46;CL:0000134,7.83e-09,46;CL:0000988,5.10e-08,32;CL:0002032,5.10e-08,32;CL:0000037,5.10e-08,32;CL:0000837,5.10e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!3.30e-14!70;UBERON:0004119!6.27e-14!130;UBERON:0000925!6.27e-14!130;UBERON:0006595!6.27e-14!130;UBERON:0001007!7.60e-14!128;UBERON:0001555!7.60e-14!128;UBERON:0007026!7.60e-14!128;UBERON:0004921!7.78e-13!126;UBERON:0004185!7.78e-13!126;UBERON:0005409!2.01e-11!59;UBERON:0004923!7.52e-11!24;UBERON:0000344!1.02e-09!15;UBERON:0002193!1.67e-09!48;UBERON:0003929!1.94e-09!55;UBERON:0002384!9.02e-09!46;UBERON:0000490!1.38e-08!66;UBERON:0001242!1.69e-08!13;UBERON:0000060!1.69e-08!13;UBERON:0001262!1.69e-08!13;UBERON:0004786!1.69e-08!13;UBERON:0002390!2.31e-08!45;UBERON:0003061!2.31e-08!45;UBERON:0000160!2.78e-08!43;UBERON:0005057!4.43e-08!51;UBERON:0005911!7.20e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.57e-16,118;UBERON:0000925,8.57e-16,118;UBERON:0006595,8.57e-16,118;UBERON:0001007,9.86e-16,116;UBERON:0001555,9.86e-16,116;UBERON:0007026,9.86e-16,116;UBERON:0005409,3.96e-15,47;UBERON:0004921,1.20e-14,114;UBERON:0000160,2.74e-12,31;UBERON:0004923,7.38e-11,24;UBERON:0000344,1.00e-09,15;UBERON:0002193,1.44e-09,48;UBERON:0002405,1.44e-09,48;UBERON:0003929,1.92e-09,55;UBERON:0002384,7.83e-09,46;UBERON:0000490,1.37e-08,66;UBERON:0001242,1.66e-08,13;UBERON:0001262,1.66e-08,13;UBERON:0004786,1.66e-08,13;UBERON:0002390,2.01e-08,45;UBERON:0003061,2.01e-08,45;UBERON:0005911,7.16e-07,69|phase1_expression=2.88267924788629,39.0852456556084,37.309937629942,16.3330674105688,22.0394121176393,21.4885468047219,23.8284893407436,8.13476937681931,10.4183654392233,8.66038747391376,14.7247452673934,15.1567102091139,9.75844160607873,6.03200776691082,21.6521345180181,22.069804145491,11.8925519281785,10.7257136221801,10.2835825204304,11.0341309467488,4.42225108785563,33.8582143595019,42.5755656296465,32.1584769814747,33.2643457547397,53.4035726626969,41.7839136274303,38.78482188346,25.8431850460668,23.4388020676736,36.36380374747,12.7006134691926,7.99584223859941,0,23.6858328196045,27.2624818387927,21.029443695024,21.7636447983192,89.0722292757133,54.9699931172488,11.1763982725893,9.56263678941824,12.62326917881,2.26614272356039,2.73717714292689,4.77221555620372,7.82391344348039,1.30815093828268,1.31811709640683,1.74986909166855,2.2397827460058,1.43752564364972,8.55691290894455,10.1550699881588,8.06625117941913,4.63066984864705,5.15760191889762,7.73508138416164,0.809265843438391,1.05798195854407,0.633831403506179,6.09920157724438,4.4464739805557,16.6481447697059,20.7661936139065,22.7353636782752,3.29560121570245,3.45796474789399,1.76272340924412,2.56511282830212,1.26194976810829,2.57085885963423,1.98781686856452,1.83736198822431,1.53352753629178,0.919218786610021,1.10115880999389,0.893811366596314,1.0752457327937,1.05509030184155,0.731901148819277,2.08365348222704,0.279182999001381,0.56276261003168,0.763991238884051,0.294628585473668,1.13897344639282,1.3047961207771,2.34751199332871,4.53429360640713,3.47837386442013,15.487629785665,4.75979933595425,11.873470216032,11.695975514058,8.06448396775204,9.12888730856387,8.01022516116871,5.97507810586598,10.2468476607999,6.05626705039726,14.115912515575,15.2883143823987,0,7.57718643539249,5.32055717497707,4.54972000513305,10.6191008138726,9.32176381129818,2.82040064223167,12.3174582003956,14.9188084372949,12.6838523490832,13.7157602902887,7.4080885495494,7.6656620711102,5.93267922562497,7.95296463059514,6.19227386364912,6.30890714794896,7.72945314611377,10.1823803158397,9.31958806090611,0.585561594023094,0.209446706813455,13.5392239260553,28.6358147569149,46.7924130174858,36.9774360782618,0.299581278809645,0,1.50785222535437,0.173824320192276,0.511430914660661,0.20778804455956,0.486723789203273,4.58277137326423,9.70374370758726,5.55990068554084,2.10441855886474,5.72529949035896,4.82794419310293,3.42118046630164,3.16480117455002,1.15662048557257,1.5373646434182,0.562210347358373,1.81092359517311,7.11374376678379,3.59301552318857,4.75068035242662,8.11024209982027,4.17070873838397,4.87553033131033,5.96768195583036,4.17971960318836,47.7504967373,27.7935739683892,28.7005134389549,7.45652781127807,8.67746421930056,7.92273070428465,5.20838418287463,7.47704080640135,6.17068451549513,5.34828072925938,4.56064782379353,6.30532848782715,8.06343264576054,6.895033491322,3.64809642956351,2.19299981137998,4.39100230582101,2.41571553768669,0.630869845692382,1.02904612379284,17.5121954981413,18.5115396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|EntrezGene=68250
|HGNC=
|MCL_coexpression_id=1558
|UniProt=Q9DCL2
|association_with_transcript=142bp_to_ENSMUST00000034945,NM_026635,uc009qel.1_5end
|description=CAGE_peak_3_at_Fam96a_5end
|id=chr9:65974560..65974588,+
|ontology_enrichment_celltype=CL:0000063!2.45e-13!66;CL:0002320!9.02e-09!46;CL:0000134!9.02e-09!46;CL:0000988!5.94e-08!32;CL:0002032!5.94e-08!32;CL:0000037!5.94e-08!32;CL:0000566!5.94e-08!32;CL:0000837!5.94e-08!32
|ontology_enrichment_celltype_v019_2=CL:0002320,7.83e-09,46;CL:0000134,7.83e-09,46;CL:0000988,5.10e-08,32;CL:0002032,5.10e-08,32;CL:0000037,5.10e-08,32;CL:0000837,5.10e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!3.30e-14!70;UBERON:0004119!6.27e-14!130;UBERON:0000925!6.27e-14!130;UBERON:0006595!6.27e-14!130;UBERON:0001007!7.60e-14!128;UBERON:0001555!7.60e-14!128;UBERON:0007026!7.60e-14!128;UBERON:0004921!7.78e-13!126;UBERON:0004185!7.78e-13!126;UBERON:0005409!2.01e-11!59;UBERON:0004923!7.52e-11!24;UBERON:0000344!1.02e-09!15;UBERON:0002193!1.67e-09!48;UBERON:0003929!1.94e-09!55;UBERON:0002384!9.02e-09!46;UBERON:0000490!1.38e-08!66;UBERON:0001242!1.69e-08!13;UBERON:0000060!1.69e-08!13;UBERON:0001262!1.69e-08!13;UBERON:0004786!1.69e-08!13;UBERON:0002390!2.31e-08!45;UBERON:0003061!2.31e-08!45;UBERON:0000160!2.78e-08!43;UBERON:0005057!4.43e-08!51;UBERON:0005911!7.20e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.57e-16,118;UBERON:0000925,8.57e-16,118;UBERON:0006595,8.57e-16,118;UBERON:0001007,9.86e-16,116;UBERON:0001555,9.86e-16,116;UBERON:0007026,9.86e-16,116;UBERON:0005409,3.96e-15,47;UBERON:0004921,1.20e-14,114;UBERON:0000160,2.74e-12,31;UBERON:0004923,7.38e-11,24;UBERON:0000344,1.00e-09,15;UBERON:0002193,1.44e-09,48;UBERON:0002405,1.44e-09,48;UBERON:0003929,1.92e-09,55;UBERON:0002384,7.83e-09,46;UBERON:0000490,1.37e-08,66;UBERON:0001242,1.66e-08,13;UBERON:0001262,1.66e-08,13;UBERON:0004786,1.66e-08,13;UBERON:0002390,2.01e-08,45;UBERON:0003061,2.01e-08,45;UBERON:0005911,7.16e-07,69
|phase1_expression=2.88267924788629,39.0852456556084,37.309937629942,16.3330674105688,22.0394121176393,21.4885468047219,23.8284893407436,8.13476937681931,10.4183654392233,8.66038747391376,14.7247452673934,15.1567102091139,9.75844160607873,6.03200776691082,21.6521345180181,22.069804145491,11.8925519281785,10.7257136221801,10.2835825204304,11.0341309467488,4.42225108785563,33.8582143595019,42.5755656296465,32.1584769814747,33.2643457547397,53.4035726626969,41.7839136274303,38.78482188346,25.8431850460668,23.4388020676736,36.36380374747,12.7006134691926,7.99584223859941,0,23.6858328196045,27.2624818387927,21.029443695024,21.7636447983192,89.0722292757133,54.9699931172488,11.1763982725893,9.56263678941824,12.62326917881,2.26614272356039,2.73717714292689,4.77221555620372,7.82391344348039,1.30815093828268,1.31811709640683,1.74986909166855,2.2397827460058,1.43752564364972,8.55691290894455,10.1550699881588,8.06625117941913,4.63066984864705,5.15760191889762,7.73508138416164,0.809265843438391,1.05798195854407,0.633831403506179,6.09920157724438,4.4464739805557,16.6481447697059,20.7661936139065,22.7353636782752,3.29560121570245,3.45796474789399,1.76272340924412,2.56511282830212,1.26194976810829,2.57085885963423,1.98781686856452,1.83736198822431,1.53352753629178,0.919218786610021,1.10115880999389,0.893811366596314,1.0752457327937,1.05509030184155,0.731901148819277,2.08365348222704,0.279182999001381,0.56276261003168,0.763991238884051,0.294628585473668,1.13897344639282,1.3047961207771,2.34751199332871,4.53429360640713,3.47837386442013,15.487629785665,4.75979933595425,11.873470216032,11.695975514058,8.06448396775204,9.12888730856387,8.01022516116871,5.97507810586598,10.2468476607999,6.05626705039726,14.115912515575,15.2883143823987,0,7.57718643539249,5.32055717497707,4.54972000513305,10.6191008138726,9.32176381129818,2.82040064223167,12.3174582003956,14.9188084372949,12.6838523490832,13.7157602902887,7.4080885495494,7.6656620711102,5.93267922562497,7.95296463059514,6.19227386364912,6.30890714794896,7.72945314611377,10.1823803158397,9.31958806090611,0.585561594023094,0.209446706813455,13.5392239260553,28.6358147569149,46.7924130174858,36.9774360782618,0.299581278809645,0,1.50785222535437,0.173824320192276,0.511430914660661,0.20778804455956,0.486723789203273,4.58277137326423,9.70374370758726,5.55990068554084,2.10441855886474,5.72529949035896,4.82794419310293,3.42118046630164,3.16480117455002,1.15662048557257,1.5373646434182,0.562210347358373,1.81092359517311,7.11374376678379,3.59301552318857,4.75068035242662,8.11024209982027,4.17070873838397,4.87553033131033,5.96768195583036,4.17971960318836,47.7504967373,27.7935739683892,28.7005134389549,7.45652781127807,8.67746421930056,7.92273070428465,5.20838418287463,7.47704080640135,6.17068451549513,5.34828072925938,4.56064782379353,6.30532848782715,8.06343264576054,6.895033491322,3.64809642956351,2.19299981137998,4.39100230582101,2.41571553768669,0.630869845692382,1.02904612379284,17.5121954981413,18.5115396664481,8.74481827194459,6.73486348395272,10.4382643670896,9.07575860805041,13.1203045868473,18.6421113590308,10.4396393539793,18.2815839743652,15.0801125280162,14.1259095149217,7.79856348476481,12.5834717211591,13.400559092231,12.7450414882795,8.72472344384176,6.39791670614481,2.25415471346161,4.2766778847516,8.92181440971078,6.24208797023835,5.12215950706484,4.87113488332687,7.37894020854462,9.87177311374404,10.6722945751374,14.3486790915841,14.3488066432638,20.4624522270217,21.7060329885698,18.3294641411837,17.0599320693551,9.78166867332756,13.781494275878,14.5517548989683,11.5014565221884,8.55924179637558,6.24075346229121,7.57736633841335,9.86685774370517,14.9557491622644,4.80358294433172,9.66406200029472,5.0519142697028,6.11082308790677,7.04070744865506,7.37027532743989,6.9032655856944,3.90267295715598,3.94087860265477,3.32197034473162,3.50800491046472,2.78567635016755,5.69860440157455,5.78596234326046,22.6186925908908,48.4076058598651,6.88469982226651,3.31124095565679,0.481651769963376,0.703270119553219,8.0328123234571,3.28212205365685,5.36363973007636,10.9322848403059,5.38558494331997,5.4962823529087,6.23836287430704,4.81230102341015,4.85772842009873,9.05993159525067,2.76701444562566,0,2.2710413633323,4.98583690268315,3.58351310577867,1.97964147567043,2.65490276679926,10.1967867185092,10.2790009368015,6.60117779145643,6.20133975049623,3.99665692327106,9.04499026088774,4.36240475373007,6.41695281092498,3.16036757935816,1.05418608574999,3.09406629744561,0.680879211507576,5.04171063287669,4.39819524861365,3.21505552547388,2.30542303734956,3.38900753443934,3.62007845324666,1.8267896946876,9.62154003061212,5.50763384245932,0.882113592219848,0.8244312647074,3.22928853391811,3.01564624640779,3.70054266409723,3.28281799490123,10.2018292820448,0.741701208042039,12.3027034174454,11.9704383418669,14.2599786074678,19.4019510714832,15.8565304156389,16.4720284708696,14.7881234094654,15.3946597556024,15.0637971446822,30.5494597764836,7.43389584915668,5.08298667817122,8.5324219249223,6.06356058441959,8.29777742235475,7.95699643670442,7.85207829390691,20.6787194167383,12.3134224627203,4.97071450469541,4.50954350947352,6.72824457197905,9.76205093696876,8.75030347548214,6.07051170345336,8.10989402355735,5.39843297770468,4.6873578543822,3.25063967719704,1.93267296660805,2.59227005632079,5.05617793005085,9.52808511863772,9.75754093065859,8.05509102462329,9.48841487037652,6.35780335300048,10.5771995577573,9.30444021199837,8.07731599585181,7.62068066549998,6.55370203389463,4.97035191772737,7.31209996466504,5.96072201126002,1.13365191807606,11.9872414821995,10.4965212233087,12.927115460034,2.12508553435409,7.88266396894964,10.4396425832341,4.07299920250225,0.501572104035363,0,0,0.572895513439397,0.68741272937475,0,0.755393897389701,2.02506750069542,0.45032120322422,0.453142408984205,0.51776031175182,7.36890167847654,3.99024873401031,4.78054096111576,6.32077464377565,9.4325923182592,6.80220981265052,7.11189528965169,5.97501665992793,5.13470735346904,7.32821914115013,5.0695859978048,6.41329560712659,6.46126401542189,4.8018864303652,6.20303064720623,8.09699275181225,4.63537303779422,6.94473193669338,5.35711671044299,6.47675248591348,5.14303878578123,5.32427418478012,5.7224685587357,7.70336008151341,5.92889096616583,5.83840794452568,6.0366231048015,7.10288220882176,6.11118512306378,5.05028044491965,6.8808310512021,5.81176446015824,2.86461730218783,4.95797891795091,4.43685205256625,1.49886346762768,6.78401664491684,4.94203424311086,4.01705497344571,5.07360263974886,5.33296021926969
|short_description=p3@Fam96a
}}

Revision as of 18:33, 14 September 2013

Short description:p3@Fam96a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Fam96a_5end
Coexpression cluster:MCL_coexpression_mm9:1558
Association with transcript: 142bp_to_ENSMUST00000034945, NM_026635, uc009qel.1_5end
EntrezGene:Fam96a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Fam96a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I539.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I637.31
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I422.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.49
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.83
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.76
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A322.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.28
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.03
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H233.86
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I942.58
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D132.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D233.26
GP2+ M cell, pool1.CNhs13228.11845-124H953.40
GP2+ M cell, pool2.CNhs13231.11846-124I141.78
GP2+ M cell, pool3.CNhs13240.11847-124I238.78
Ileum epithelium, pool1.CNhs13199.10252-104B925.84
Ileum epithelium, pool2.CNhs13232.10253-104C123.44
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C836.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F627.26
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H189.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H354.97
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E720.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D222.74
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F94.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.87
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.62
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C512.32
adrenal gland, embryo E16.CNhs11004.1254-43D614.92
adrenal gland, embryo E17.CNhs11043.1263-45I112.68
adrenal gland, embryo E18.CNhs11026.1262-18F513.72
adrenal gland, neonate N00.CNhs11191.1311-23C17.41
adrenal gland, neonate N25.CNhs11223.1377-27I37.67
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H17.95
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F56.31
bone (os femoris), neonate N16.CNhs11225.1525-43A67.73
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H713.54
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D146.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D436.98
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.70
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C65.73
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C847.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.79
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D528.70
heart, embryo E11.CNhs10586.331-24E97.46
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C87.48
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E55.35
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E36.31
heart, neonate N03.CNhs11221.1349-25I28.06
heart, neonate N10.CNhs11118.749-24G16.90
heart, neonate N16.CNhs11209.782-15G13.65
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I317.51
intestine, adult.CNhs10496.178-9A318.51
intestine, embryo E12.CNhs11019.1251-16I58.74
intestine, embryo E13.CNhs11010.381-16D56.73
intestine, embryo E15.CNhs10602.976-16D810.44
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D313.12
intestine, embryo E18.CNhs10526.1289-20F718.64
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E918.28
intestine, neonate N06.CNhs11102.688-20B815.08
intestine, neonate N07.CNhs11095.720-20F214.13
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E313.40
intestine, neonate N30.CNhs11131.1384-42G112.75
kidney, embryo E14.CNhs10606.411-4I98.72
kidney, embryo E15.CNhs10997.434-16F86.40
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G76.24
kidney, neonate N10.CNhs11206.758-6D55.12
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F37.38
kidney, neonate N30.CNhs11203.1385-42H19.87
liver, adult pregnant day01.CNhs10466.508-5B210.67
liver, embryo E12.CNhs10601.355-15F814.35
liver, embryo E13.CNhs10524.378-3H614.35
liver, embryo E14.CNhs10594.409-16E120.46
liver, embryo E15.CNhs10520.433-16D721.71
liver, embryo E16.CNhs10523.462-17F518.33
liver, embryo E17.CNhs10510.481-18A317.06
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F413.78
liver, neonate N03.CNhs11123.1345-25G214.55
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H19.87
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G29.66
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C56.11
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A67.37
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H25.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A148.41
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.03
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F410.20
pancreas, embryo E15.CNhs11042.1556-45F210.28
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E65.04
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H33.02
skin, neonate N06.CNhs11097.693-20I53.70
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G212.30
spleen, embryo E16.CNhs11035.461-43C111.97
spleen, embryo E18.CNhs11011.1271-21F214.26
spleen, neonate N10.CNhs11116.752-24D119.40
spleen, neonate N20.CNhs11112.824-19H115.86
spleen, neonate N25.CNhs11099.1354-25G316.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.06
stomach, adult.CNhs10503.33-1H630.55
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D48.53
stomach, embryo E17.CNhs11006.1035-18D56.06
stomach, embryo E18.CNhs10999.1286-20C68.30
stomach, neonate N03.CNhs11193.1340-24B87.96
stomach, neonate N07.CNhs11210.718-18A97.85
stomach, neonate N25.CNhs11104.1355-25E420.68
stomach, neonate N30.CNhs11134.1386-42I112.31
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F56.73
testis, embryo E15.CNhs11034.443-27C59.76
testis, embryo E16.CNhs11033.470-26G58.75
testis, embryo E17.CNhs11029.486-18I56.07
testis, embryo E18.CNhs11027.503-18G58.11
testis, neonate N00.CNhs11189.1300-22B75.40
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I29.76
thymus, embryo E16.CNhs11002.456-26C58.06
thymus, embryo E17.CNhs10581.478-18C19.49
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F810.58
thymus, neonate N03.CNhs11137.2104-43C79.30
thymus, neonate N06.CNhs11197.681-26C48.08
thymus, neonate N07.CNhs11211.713-19D37.62
thymus, neonate N10.CNhs11194.748-24E46.55
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G77.31
thymus, neonate N30.CNhs11132.1393-42G25.96
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.93
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E510.44
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I87.37
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B45.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure8.57e-16118
endoderm8.57e-16118
presumptive endoderm8.57e-16118
digestive system9.86e-16116
digestive tract9.86e-16116
primitive gut9.86e-16116
gastrointestinal system3.96e-1547
subdivision of digestive tract1.20e-14114
intestine2.74e-1231
organ component layer7.38e-1124
mucosa1.00e-0915
hemolymphoid system1.44e-0948
immune system1.44e-0948
gut epithelium1.92e-0955
connective tissue7.83e-0946
unilaminar epithelium1.37e-0866
intestinal mucosa1.66e-0813
wall of intestine1.66e-0813
gastrointestinal system mucosa1.66e-0813
hematopoietic system2.01e-0845
blood island2.01e-0845
endo-epithelium7.16e-0769







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