FFCP PHASE1:Mm9::chr9:65270899..65270912,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=330962|HGNC=|MCL_coexpression_id=58|UniProt=Q80WK2|association_with_transcript=-319bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end|description=CAGE_peak_4_at_Ostb_5end|id=chr9:65270899..65270912,-|ontology_enrichment_celltype=CL:0000239!1.01e-08!6;CL:0000677!1.01e-08!6;CL:0000212!1.01e-08!6;CL:0000584!1.01e-08!6;CL:0000075!2.86e-07!7;CL:0002563!4.78e-07!9;CL:0002251!4.78e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,2.64e-16,6;CL:0000677,2.64e-16,6;CL:0000584,2.64e-16,6;CL:0000075,7.24e-14,7;CL:0002563,8.07e-14,9;CL:0002251,8.07e-14,9;CL:0000682,1.92e-09,3;CL:0000066,3.96e-09,25;CL:0002076,7.32e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.03e-17!43;UBERON:0005409!4.11e-14!59;UBERON:0000344!1.11e-13!15;UBERON:0001242!1.32e-11!13;UBERON:0000060!1.32e-11!13;UBERON:0001262!1.32e-11!13;UBERON:0004786!1.32e-11!13;UBERON:0004923!5.49e-08!24;UBERON:0003350!4.78e-07!9;UBERON:0004808!4.78e-07!9;UBERON:0001277!4.78e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.13e-51,31;UBERON:0005409,5.79e-37,47;UBERON:0000344,1.26e-27,15;UBERON:0001242,2.57e-23,13;UBERON:0001262,2.57e-23,13;UBERON:0004786,2.57e-23,13;UBERON:0004923,3.76e-16,24;UBERON:0003350,8.07e-14,9;UBERON:0004808,8.07e-14,9;UBERON:0001277,8.07e-14,9;UBERON:0001007,1.22e-13,116;UBERON:0001555,1.22e-13,116;UBERON:0007026,1.22e-13,116;UBERON:0004119,2.67e-13,118;UBERON:0000925,2.67e-13,118;UBERON:0006595,2.67e-13,118;UBERON:0004921,1.20e-11,114;UBERON:0002108,2.74e-11,4;UBERON:0000485,4.12e-11,11;UBERON:0000331,6.52e-09,3;UBERON:0002116,6.52e-09,3;UBERON:0001204,6.52e-09,3;UBERON:0001168,6.52e-09,3|phase1_expression=0,197.869056131518,171.534713249855,44.462239062104,44.5797199652249,33.2400958385542,28.9679674338452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,25.7587800697385,21.7938817013812,207.297739045522,164.120320536607,142.426484805373,33.6341452437782,42.0890316699084,101.109112858819,0,0,0,0,1.16364251750945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,10.5049169341535,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,49.3032116552581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.1362185030512,27.2384083663451,0,0,0.644337306610467,1.81515172161008,7.11609740303585,11.0330863145284,27.0481565080372,32.2809951259061,12.0640900224129,15.1206918751275,14.622306533934,29.6610404855893,32.8529835809535,25.8883655230677,0,0,0,0,0,0.210407459670956,0.252946148497029,0.442830443938806,0.784993639206874,0.863780147452604,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8877014857382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.4351045787313,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,1.31017538247707,0,0.0826534557253359,0,1.29614973291793,0,0.56369293868419,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0.483168241652012,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0.758091635291392,0.760437899670719,0.565879024158229,0.468207537349412,0.512201219238954,0.402048282689293,0.952587382566147,0.347652977834566,0.192909220463705,0,0.441596760403192,0.685738504770831,0.532427418478012,0.953744759789284,0.145346416632329,0.188218760830661,0.676916863133412,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0.591026894253381,0,0.154936841185966,0.192906610981141,0,0.701794825336225,1.50409737833809,0,0,0|short_description=p4@Ostb}} | ||
|EntrezGene=330962 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=Q80WK2 | |||
|association_with_transcript=-319bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end | |||
|description=CAGE_peak_4_at_Ostb_5end | |||
|id=chr9:65270899..65270912,- | |||
|ontology_enrichment_celltype=CL:0000239!1.01e-08!6;CL:0000677!1.01e-08!6;CL:0000212!1.01e-08!6;CL:0000584!1.01e-08!6;CL:0000075!2.86e-07!7;CL:0002563!4.78e-07!9;CL:0002251!4.78e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.64e-16,6;CL:0000677,2.64e-16,6;CL:0000584,2.64e-16,6;CL:0000075,7.24e-14,7;CL:0002563,8.07e-14,9;CL:0002251,8.07e-14,9;CL:0000682,1.92e-09,3;CL:0000066,3.96e-09,25;CL:0002076,7.32e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.03e-17!43;UBERON:0005409!4.11e-14!59;UBERON:0000344!1.11e-13!15;UBERON:0001242!1.32e-11!13;UBERON:0000060!1.32e-11!13;UBERON:0001262!1.32e-11!13;UBERON:0004786!1.32e-11!13;UBERON:0004923!5.49e-08!24;UBERON:0003350!4.78e-07!9;UBERON:0004808!4.78e-07!9;UBERON:0001277!4.78e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.13e-51,31;UBERON:0005409,5.79e-37,47;UBERON:0000344,1.26e-27,15;UBERON:0001242,2.57e-23,13;UBERON:0001262,2.57e-23,13;UBERON:0004786,2.57e-23,13;UBERON:0004923,3.76e-16,24;UBERON:0003350,8.07e-14,9;UBERON:0004808,8.07e-14,9;UBERON:0001277,8.07e-14,9;UBERON:0001007,1.22e-13,116;UBERON:0001555,1.22e-13,116;UBERON:0007026,1.22e-13,116;UBERON:0004119,2.67e-13,118;UBERON:0000925,2.67e-13,118;UBERON:0006595,2.67e-13,118;UBERON:0004921,1.20e-11,114;UBERON:0002108,2.74e-11,4;UBERON:0000485,4.12e-11,11;UBERON:0000331,6.52e-09,3;UBERON:0002116,6.52e-09,3;UBERON:0001204,6.52e-09,3;UBERON:0001168,6.52e-09,3 | |||
|phase1_expression=0,197.869056131518,171.534713249855,44.462239062104,44.5797199652249,33.2400958385542,28.9679674338452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,25.7587800697385,21.7938817013812,207.297739045522,164.120320536607,142.426484805373,33.6341452437782,42.0890316699084,101.109112858819,0,0,0,0,1.16364251750945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,10.5049169341535,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,49.3032116552581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.1362185030512,27.2384083663451,0,0,0.644337306610467,1.81515172161008,7.11609740303585,11.0330863145284,27.0481565080372,32.2809951259061,12.0640900224129,15.1206918751275,14.622306533934,29.6610404855893,32.8529835809535,25.8883655230677,0,0,0,0,0,0.210407459670956,0.252946148497029,0.442830443938806,0.784993639206874,0.863780147452604,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8877014857382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.4351045787313,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,1.31017538247707,0,0.0826534557253359,0,1.29614973291793,0,0.56369293868419,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0.483168241652012,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0.758091635291392,0.760437899670719,0.565879024158229,0.468207537349412,0.512201219238954,0.402048282689293,0.952587382566147,0.347652977834566,0.192909220463705,0,0.441596760403192,0.685738504770831,0.532427418478012,0.953744759789284,0.145346416632329,0.188218760830661,0.676916863133412,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0.591026894253381,0,0.154936841185966,0.192906610981141,0,0.701794825336225,1.50409737833809,0,0,0 | |||
|short_description=p4@Ostb | |||
}} |
Revision as of 18:32, 14 September 2013
Short description: | p4@Ostb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ostb_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -319bp_to_ENSMUST00000065894, NM_178933, uc009qdg.1_5end |
EntrezGene: | Ostb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.64e-16 | 6 |
gut absorptive cell | 2.64e-16 | 6 |
enterocyte | 2.64e-16 | 6 |
columnar/cuboidal epithelial cell | 7.24e-14 | 7 |
intestinal epithelial cell | 8.07e-14 | 9 |
epithelial cell of alimentary canal | 8.07e-14 | 9 |
M cell of gut | 1.92e-09 | 3 |
epithelial cell | 3.96e-09 | 25 |
endo-epithelial cell | 7.32e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.13e-51 | 31 |
gastrointestinal system | 5.79e-37 | 47 |
mucosa | 1.26e-27 | 15 |
intestinal mucosa | 2.57e-23 | 13 |
wall of intestine | 2.57e-23 | 13 |
gastrointestinal system mucosa | 2.57e-23 | 13 |
organ component layer | 3.76e-16 | 24 |
epithelium of mucosa | 8.07e-14 | 9 |
gastrointestinal system epithelium | 8.07e-14 | 9 |
intestinal epithelium | 8.07e-14 | 9 |
digestive system | 1.22e-13 | 116 |
digestive tract | 1.22e-13 | 116 |
primitive gut | 1.22e-13 | 116 |
endoderm-derived structure | 2.67e-13 | 118 |
endoderm | 2.67e-13 | 118 |
presumptive endoderm | 2.67e-13 | 118 |
subdivision of digestive tract | 1.20e-11 | 114 |
small intestine | 2.74e-11 | 4 |
simple columnar epithelium | 4.12e-11 | 11 |
ileal mucosa | 6.52e-09 | 3 |
ileum | 6.52e-09 | 3 |
mucosa of small intestine | 6.52e-09 | 3 |
wall of small intestine | 6.52e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.