FFCP PHASE1:Mm9::chr9:58336842..58336846,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319477|HGNC=|UniProt=Q8CD60|association_with_transcript=432bp_to_NM_176921,uc009pwz.1_5end|description=CAGE_peak_6_at_6030419C18Rik_5end|id=chr9:58336842..58336846,+|ontology_enrichment_celltype=CL:0000221!1.00e-18!44;CL:0000133!1.00e-18!44;CL:0002319!3.66e-18!43;CL:0000117!4.43e-18!23;CL:0000337!4.43e-18!23;CL:0000055!5.48e-17!50;CL:0000540!1.54e-12!33;CL:0000047!1.54e-12!33;CL:0000031!1.54e-12!33;CL:0000404!1.54e-12!33;CL:0000393!4.29e-12!39;CL:0000211!4.29e-12!39;CL:0002321!2.37e-09!70;CL:0000220!2.37e-09!70;CL:0000333!8.84e-07!10;CL:0000095!8.84e-07!10;CL:0000243!8.84e-07!10;CL:0000123!8.84e-07!10;CL:0000125!8.84e-07!10;CL:0000030!8.84e-07!10;CL:0000339!8.84e-07!10|ontology_enrichment_celltype_v019_2=CL:0000117,8.80e-19,23;CL:0000337,8.80e-19,23;CL:0002319,9.09e-18,43;CL:0000221,2.65e-17,44;CL:0000133,2.65e-17,44;CL:0000540,1.59e-12,33;CL:0000047,1.59e-12,33;CL:0000031,1.59e-12,33;CL:0000404,1.59e-12,33;CL:0000393,2.60e-10,39;CL:0000211,2.60e-10,39;CL:0002321,7.22e-10,70;CL:0002453,6.41e-08,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.91e-31!75;UBERON:0001016!3.91e-31!75;UBERON:0001017!4.99e-30!73;UBERON:0005743!4.99e-30!73;UBERON:0001049!7.01e-28!52;UBERON:0005068!7.01e-28!52;UBERON:0006241!7.01e-28!52;UBERON:0007135!7.01e-28!52;UBERON:0004121!1.10e-24!102;UBERON:0000924!1.10e-24!102;UBERON:0006601!1.10e-24!102;UBERON:0000955!1.69e-24!50;UBERON:0006238!1.69e-24!50;UBERON:0002616!1.08e-23!49;UBERON:0002020!4.50e-23!34;UBERON:0000033!8.92e-23!63;UBERON:0002346!6.92e-22!71;UBERON:0003075!6.92e-22!71;UBERON:0007284!6.92e-22!71;UBERON:0002791!1.08e-18!29;UBERON:0003528!1.08e-18!29;UBERON:0001893!1.08e-18!29;UBERON:0003080!5.06e-18!40;UBERON:0002780!1.08e-17!39;UBERON:0001890!1.08e-17!39;UBERON:0006240!1.08e-17!39;UBERON:0003056!2.47e-15!49;UBERON:0000956!1.79e-13!21;UBERON:0001869!1.79e-13!21;UBERON:0000203!1.79e-13!21;UBERON:0007811!6.25e-13!86;UBERON:0000153!3.71e-11!94;UBERON:0002619!5.09e-11!17;UBERON:0004111!7.01e-11!122;UBERON:0000025!9.38e-11!114;UBERON:0003076!1.03e-10!12;UBERON:0003057!1.03e-10!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.81e-26,54;UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0002020,7.11e-24,34;UBERON:0001049,1.27e-21,52;UBERON:0005068,1.27e-21,52;UBERON:0006241,1.27e-21,52;UBERON:0007135,1.27e-21,52;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0003528,7.89e-18,29;UBERON:0002791,7.89e-18,29;UBERON:0001893,7.89e-18,29;UBERON:0002346,5.62e-17,64;UBERON:0003075,5.62e-17,64;UBERON:0007284,5.62e-17,64;UBERON:0002616,1.11e-16,46;UBERON:0000955,2.88e-16,47;UBERON:0006238,2.88e-16,47;UBERON:0002780,4.95e-15,39;UBERON:0001890,4.95e-15,39;UBERON:0006240,4.95e-15,39;UBERON:0003080,1.35e-14,40;UBERON:0010371,1.72e-14,73;UBERON:0002420,1.32e-12,8;UBERON:0007245,1.32e-12,8;UBERON:0010009,1.32e-12,8;UBERON:0010011,1.32e-12,8;UBERON:0000454,1.32e-12,8;UBERON:0003056,1.75e-11,49;UBERON:0010314,7.88e-11,92;UBERON:0002619,1.17e-10,17;UBERON:0002021,8.59e-10,10;UBERON:0000411,8.59e-10,10;UBERON:0001950,8.59e-10,10;UBERON:0000956,1.81e-08,21;UBERON:0001869,1.81e-08,21;UBERON:0000203,1.81e-08,21;UBERON:0000025,4.17e-08,114;UBERON:0003076,6.37e-08,12;UBERON:0003057,6.37e-08,12;UBERON:0000369,8.27e-08,5;UBERON:0002435,8.27e-08,5;UBERON:0000204,8.27e-08,5;UBERON:0010082,8.27e-08,5;UBERON:0001948,9.20e-08,5;UBERON:0002315,9.20e-08,5;UBERON:0004111,2.34e-07,122;UBERON:0011216,3.78e-07,194|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.709638518536602,0.183546752161682,0.782391344348039,1.09012578190223,0.219686182734472,1.1665793944457,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0.677689064138264,0,0,0,0,1.19840044207362,0,0.207379224616955,0.675029691658453,0.420649922702764,0.571301968807607,1.98781686856452,0.489963196859816,1.43768206527355,0.919218786610021,0,1.0214987046815,1.0752457327937,0.263772575460388,2.92760459527711,1.04182674111352,2.23346399201105,0.56276261003168,1.37518422999129,0.294628585473668,1.42371680799103,1.1183966749518,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,1.04723353406728,0.255457055208591,0,0,0,0.149790639404823,1.83000241127451,0,0.521472960576829,0.767146371990992,1.24672826735736,0.648965052271031,0.712875546952214,0,0,0,0.260240885925407,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0,0.268412837520744,0.841159794256509,0.102904612379284,0,0,0.213288250535234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| ||
|EntrezGene=319477 | |||
|HGNC= | |||
|UniProt=Q8CD60 | |||
|association_with_transcript=432bp_to_NM_176921,uc009pwz.1_5end | |||
|description=CAGE_peak_6_at_6030419C18Rik_5end | |||
|id=chr9:58336842..58336846,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.00e-18!44;CL:0000133!1.00e-18!44;CL:0002319!3.66e-18!43;CL:0000117!4.43e-18!23;CL:0000337!4.43e-18!23;CL:0000055!5.48e-17!50;CL:0000540!1.54e-12!33;CL:0000047!1.54e-12!33;CL:0000031!1.54e-12!33;CL:0000404!1.54e-12!33;CL:0000393!4.29e-12!39;CL:0000211!4.29e-12!39;CL:0002321!2.37e-09!70;CL:0000220!2.37e-09!70;CL:0000333!8.84e-07!10;CL:0000095!8.84e-07!10;CL:0000243!8.84e-07!10;CL:0000123!8.84e-07!10;CL:0000125!8.84e-07!10;CL:0000030!8.84e-07!10;CL:0000339!8.84e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.80e-19,23;CL:0000337,8.80e-19,23;CL:0002319,9.09e-18,43;CL:0000221,2.65e-17,44;CL:0000133,2.65e-17,44;CL:0000540,1.59e-12,33;CL:0000047,1.59e-12,33;CL:0000031,1.59e-12,33;CL:0000404,1.59e-12,33;CL:0000393,2.60e-10,39;CL:0000211,2.60e-10,39;CL:0002321,7.22e-10,70;CL:0002453,6.41e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.91e-31!75;UBERON:0001016!3.91e-31!75;UBERON:0001017!4.99e-30!73;UBERON:0005743!4.99e-30!73;UBERON:0001049!7.01e-28!52;UBERON:0005068!7.01e-28!52;UBERON:0006241!7.01e-28!52;UBERON:0007135!7.01e-28!52;UBERON:0004121!1.10e-24!102;UBERON:0000924!1.10e-24!102;UBERON:0006601!1.10e-24!102;UBERON:0000955!1.69e-24!50;UBERON:0006238!1.69e-24!50;UBERON:0002616!1.08e-23!49;UBERON:0002020!4.50e-23!34;UBERON:0000033!8.92e-23!63;UBERON:0002346!6.92e-22!71;UBERON:0003075!6.92e-22!71;UBERON:0007284!6.92e-22!71;UBERON:0002791!1.08e-18!29;UBERON:0003528!1.08e-18!29;UBERON:0001893!1.08e-18!29;UBERON:0003080!5.06e-18!40;UBERON:0002780!1.08e-17!39;UBERON:0001890!1.08e-17!39;UBERON:0006240!1.08e-17!39;UBERON:0003056!2.47e-15!49;UBERON:0000956!1.79e-13!21;UBERON:0001869!1.79e-13!21;UBERON:0000203!1.79e-13!21;UBERON:0007811!6.25e-13!86;UBERON:0000153!3.71e-11!94;UBERON:0002619!5.09e-11!17;UBERON:0004111!7.01e-11!122;UBERON:0000025!9.38e-11!114;UBERON:0003076!1.03e-10!12;UBERON:0003057!1.03e-10!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.81e-26,54;UBERON:0001017,5.02e-25,73;UBERON:0001016,2.88e-24,75;UBERON:0002020,7.11e-24,34;UBERON:0001049,1.27e-21,52;UBERON:0005068,1.27e-21,52;UBERON:0006241,1.27e-21,52;UBERON:0007135,1.27e-21,52;UBERON:0004121,1.98e-18,95;UBERON:0000924,1.98e-18,95;UBERON:0006601,1.98e-18,95;UBERON:0003528,7.89e-18,29;UBERON:0002791,7.89e-18,29;UBERON:0001893,7.89e-18,29;UBERON:0002346,5.62e-17,64;UBERON:0003075,5.62e-17,64;UBERON:0007284,5.62e-17,64;UBERON:0002616,1.11e-16,46;UBERON:0000955,2.88e-16,47;UBERON:0006238,2.88e-16,47;UBERON:0002780,4.95e-15,39;UBERON:0001890,4.95e-15,39;UBERON:0006240,4.95e-15,39;UBERON:0003080,1.35e-14,40;UBERON:0010371,1.72e-14,73;UBERON:0002420,1.32e-12,8;UBERON:0007245,1.32e-12,8;UBERON:0010009,1.32e-12,8;UBERON:0010011,1.32e-12,8;UBERON:0000454,1.32e-12,8;UBERON:0003056,1.75e-11,49;UBERON:0010314,7.88e-11,92;UBERON:0002619,1.17e-10,17;UBERON:0002021,8.59e-10,10;UBERON:0000411,8.59e-10,10;UBERON:0001950,8.59e-10,10;UBERON:0000956,1.81e-08,21;UBERON:0001869,1.81e-08,21;UBERON:0000203,1.81e-08,21;UBERON:0000025,4.17e-08,114;UBERON:0003076,6.37e-08,12;UBERON:0003057,6.37e-08,12;UBERON:0000369,8.27e-08,5;UBERON:0002435,8.27e-08,5;UBERON:0000204,8.27e-08,5;UBERON:0010082,8.27e-08,5;UBERON:0001948,9.20e-08,5;UBERON:0002315,9.20e-08,5;UBERON:0004111,2.34e-07,122;UBERON:0011216,3.78e-07,194 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.709638518536602,0.183546752161682,0.782391344348039,1.09012578190223,0.219686182734472,1.1665793944457,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0.677689064138264,0,0,0,0,1.19840044207362,0,0.207379224616955,0.675029691658453,0.420649922702764,0.571301968807607,1.98781686856452,0.489963196859816,1.43768206527355,0.919218786610021,0,1.0214987046815,1.0752457327937,0.263772575460388,2.92760459527711,1.04182674111352,2.23346399201105,0.56276261003168,1.37518422999129,0.294628585473668,1.42371680799103,1.1183966749518,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,1.04723353406728,0.255457055208591,0,0,0,0.149790639404823,1.83000241127451,0,0.521472960576829,0.767146371990992,1.24672826735736,0.648965052271031,0.712875546952214,0,0,0,0.260240885925407,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0,0.268412837520744,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0.35163505977661,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0.238744688006273,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0.920650473014354,0.572895513439397,0.515559547031063,1.37016503954128,1.5107877947794,2.70009000092722,0,1.35942722695261,1.03552062350364,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.347652977834566,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@6030419C18Rik | |||
}} |
Revision as of 18:23, 14 September 2013
Short description: | p6@6030419C18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_6030419C18Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 432bp_to_NM_176921, uc009pwz.1_5end |
EntrezGene: | 6030419C18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.80e-19 | 23 |
neuroblast (sensu Vertebrata) | 8.80e-19 | 23 |
neural cell | 9.09e-18 | 43 |
ectodermal cell | 2.65e-17 | 44 |
neurectodermal cell | 2.65e-17 | 44 |
neuron | 1.59e-12 | 33 |
neuronal stem cell | 1.59e-12 | 33 |
neuroblast | 1.59e-12 | 33 |
electrically signaling cell | 1.59e-12 | 33 |
electrically responsive cell | 2.60e-10 | 39 |
electrically active cell | 2.60e-10 | 39 |
embryonic cell | 7.22e-10 | 70 |
oligodendrocyte precursor cell | 6.41e-08 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.