FFCP PHASE1:Mm9::chr9:46050548..46050597,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=615|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46050548..46050597,-|id=chr9:46050548..46050597,-|ontology_enrichment_celltype=CL:0000239!1.74e-07!6;CL:0000677!1.74e-07!6;CL:0000212!1.74e-07!6;CL:0000584!1.74e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,6.34e-09,6;CL:0000677,6.34e-09,6;CL:0000584,6.34e-09,6;CL:0000075,1.72e-07,7;CL:0000066,8.24e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.12e-15!43;UBERON:0005409!8.84e-13!59;UBERON:0000344!3.02e-11!15;UBERON:0001242!4.89e-09!13;UBERON:0000060!4.89e-09!13;UBERON:0001262!4.89e-09!13;UBERON:0004786!4.89e-09!13;UBERON:0004119!5.74e-09!130;UBERON:0000925!5.74e-09!130;UBERON:0006595!5.74e-09!130;UBERON:0004923!9.74e-09!24;UBERON:0001007!3.33e-08!128;UBERON:0001555!3.33e-08!128;UBERON:0007026!3.33e-08!128;UBERON:0004921!4.06e-07!126;UBERON:0004185!4.06e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.52e-23,31;UBERON:0005409,1.35e-16,47;UBERON:0000344,2.58e-12,15;UBERON:0001242,1.19e-09,13;UBERON:0001262,1.19e-09,13;UBERON:0004786,1.19e-09,13;UBERON:0004119,3.63e-09,118;UBERON:0000925,3.63e-09,118;UBERON:0006595,3.63e-09,118;UBERON:0004923,5.46e-09,24;UBERON:0001007,7.64e-09,116;UBERON:0001555,7.64e-09,116;UBERON:0007026,7.64e-09,116;UBERON:0004921,1.49e-07,114|phase1_expression=0,73.6338110119052,78.7148684143897,10.2837831844322,24.0429950374247,7.72244650794693,11.2134067485852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,94.3955294481099,146.133712039787,37.8993096315913,29.2918157388171,43.3097177698637,3.80046838912748,1.51218077855958,14.1907526819395,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,72.0769613730216,1.07940638327563,1.94932925234301,1.79210754838934,3.08977724289854,0,0,0,0,0,0,0,0,0,0,5.48082622651488,0,0,0,0,0,0,0,0,26.6970565153124,0,0,0.161766849947409,0,0,0,0,0,13.2837668708468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.090660290945,70.3438507325028,0,0,0.257734922644187,6.85723983719365,19.1245117706588,46.605278397577,92.5331670011798,228.931547066375,176.437316577789,101.467800740987,97.4820435595601,45.8397898413653,53.6022363689242,53.5690025054248,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0,0,0,0,0,0.25462585178142,0,1.13494658742525,9.06052663520669,2.87536413054709,2.23284568601102,0,0.505157755894224,0.538192240565737,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,25.3259727304857,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.704015124191131,1.69465656691056,0,0,0,0,0,0,75.2020558505015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972048067396211,1.04544148007234,7.42432716737004,0.944050424693745,1.48776220305605,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.888986911206461,1.85431551515005,0.64183841918363,1.26348605881899,1.52087579934144,1.50901073108861,2.62196220915671,1.60062881012173,1.26358031702349,0.952587382566147,1.97003354106254,2.12200142510076,2.47251540481984,1.32479028120958,0.685738504770831,2.30718548007139,3.57654284920981,2.0348498328526,1.50575008664529,2.03075058940024,1.09756783723664,0.526139422875686,1.35804113845862,0,1.89816028998679,1.28055827088233,2.45538625901814,0.77468420592983,0.771626443924566,0,4.21076895201735,2.79332370262788,0,0,0|short_description=p@chr9:46050548..46050597,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=615 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:46050548..46050597,- | |||
|id=chr9:46050548..46050597,- | |||
|ontology_enrichment_celltype=CL:0000239!1.74e-07!6;CL:0000677!1.74e-07!6;CL:0000212!1.74e-07!6;CL:0000584!1.74e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.34e-09,6;CL:0000677,6.34e-09,6;CL:0000584,6.34e-09,6;CL:0000075,1.72e-07,7;CL:0000066,8.24e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.12e-15!43;UBERON:0005409!8.84e-13!59;UBERON:0000344!3.02e-11!15;UBERON:0001242!4.89e-09!13;UBERON:0000060!4.89e-09!13;UBERON:0001262!4.89e-09!13;UBERON:0004786!4.89e-09!13;UBERON:0004119!5.74e-09!130;UBERON:0000925!5.74e-09!130;UBERON:0006595!5.74e-09!130;UBERON:0004923!9.74e-09!24;UBERON:0001007!3.33e-08!128;UBERON:0001555!3.33e-08!128;UBERON:0007026!3.33e-08!128;UBERON:0004921!4.06e-07!126;UBERON:0004185!4.06e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.52e-23,31;UBERON:0005409,1.35e-16,47;UBERON:0000344,2.58e-12,15;UBERON:0001242,1.19e-09,13;UBERON:0001262,1.19e-09,13;UBERON:0004786,1.19e-09,13;UBERON:0004119,3.63e-09,118;UBERON:0000925,3.63e-09,118;UBERON:0006595,3.63e-09,118;UBERON:0004923,5.46e-09,24;UBERON:0001007,7.64e-09,116;UBERON:0001555,7.64e-09,116;UBERON:0007026,7.64e-09,116;UBERON:0004921,1.49e-07,114 | |||
|phase1_expression=0,73.6338110119052,78.7148684143897,10.2837831844322,24.0429950374247,7.72244650794693,11.2134067485852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,94.3955294481099,146.133712039787,37.8993096315913,29.2918157388171,43.3097177698637,3.80046838912748,1.51218077855958,14.1907526819395,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,72.0769613730216,1.07940638327563,1.94932925234301,1.79210754838934,3.08977724289854,0,0,0,0,0,0,0,0,0,0,5.48082622651488,0,0,0,0,0,0,0,0,26.6970565153124,0,0,0.161766849947409,0,0,0,0,0,13.2837668708468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.090660290945,70.3438507325028,0,0,0.257734922644187,6.85723983719365,19.1245117706588,46.605278397577,92.5331670011798,228.931547066375,176.437316577789,101.467800740987,97.4820435595601,45.8397898413653,53.6022363689242,53.5690025054248,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0,0,0,0,0,0.25462585178142,0,1.13494658742525,9.06052663520669,2.87536413054709,2.23284568601102,0,0.505157755894224,0.538192240565737,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,25.3259727304857,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.704015124191131,1.69465656691056,0,0,0,0,0,0,75.2020558505015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972048067396211,1.04544148007234,7.42432716737004,0.944050424693745,1.48776220305605,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0.888986911206461,1.85431551515005,0.64183841918363,1.26348605881899,1.52087579934144,1.50901073108861,2.62196220915671,1.60062881012173,1.26358031702349,0.952587382566147,1.97003354106254,2.12200142510076,2.47251540481984,1.32479028120958,0.685738504770831,2.30718548007139,3.57654284920981,2.0348498328526,1.50575008664529,2.03075058940024,1.09756783723664,0.526139422875686,1.35804113845862,0,1.89816028998679,1.28055827088233,2.45538625901814,0.77468420592983,0.771626443924566,0,4.21076895201735,2.79332370262788,0,0,0 | |||
|short_description=p@chr9:46050548..46050597,- | |||
}} |
Revision as of 18:04, 14 September 2013
Short description: | p@chr9:46050548..46050597, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46050548..46050597, - |
Coexpression cluster: | MCL_coexpression_mm9:615 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.34e-09 | 6 |
gut absorptive cell | 6.34e-09 | 6 |
enterocyte | 6.34e-09 | 6 |
columnar/cuboidal epithelial cell | 1.72e-07 | 7 |
epithelial cell | 8.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.52e-23 | 31 |
gastrointestinal system | 1.35e-16 | 47 |
mucosa | 2.58e-12 | 15 |
intestinal mucosa | 1.19e-09 | 13 |
wall of intestine | 1.19e-09 | 13 |
gastrointestinal system mucosa | 1.19e-09 | 13 |
endoderm-derived structure | 3.63e-09 | 118 |
endoderm | 3.63e-09 | 118 |
presumptive endoderm | 3.63e-09 | 118 |
organ component layer | 5.46e-09 | 24 |
digestive system | 7.64e-09 | 116 |
digestive tract | 7.64e-09 | 116 |
primitive gut | 7.64e-09 | 116 |
subdivision of digestive tract | 1.49e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.