FFCP PHASE1:Mm9::chr9:44946379..44946388,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=399548|HGNC=|MCL_coexpression_id=90|UniProt=Q7M729|association_with_transcript=-131bp_to_ENSMUST00000060125_5end|description=CAGE_peak_20_at_Scn4b_5end|id=chr9:44946379..44946388,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!6.01e-10!50;UBERON:0006238!6.01e-10!50;UBERON:0001896!4.71e-09!2;UBERON:0005290!4.71e-09!2;UBERON:0010096!4.71e-09!2;UBERON:0001017!1.08e-08!73;UBERON:0005743!1.08e-08!73;UBERON:0002616!1.88e-08!49;UBERON:0000073!2.15e-08!75;UBERON:0001016!2.15e-08!75;UBERON:0007811!4.29e-08!86;UBERON:0001049!7.02e-08!52;UBERON:0005068!7.02e-08!52;UBERON:0006241!7.02e-08!52;UBERON:0007135!7.02e-08!52;UBERON:0000033!1.83e-07!63;UBERON:0000153!3.55e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001851,8.39e-23,1;UBERON:0005889,8.39e-23,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.6725259212009,0.125654352112864,1.39059456153821,1.53429274398198,0.83115217823824,5.51620294430376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p20@Scn4b}} | ||
|EntrezGene=399548 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=Q7M729 | |||
|association_with_transcript=-131bp_to_ENSMUST00000060125_5end | |||
|description=CAGE_peak_20_at_Scn4b_5end | |||
|id=chr9:44946379..44946388,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!6.01e-10!50;UBERON:0006238!6.01e-10!50;UBERON:0001896!4.71e-09!2;UBERON:0005290!4.71e-09!2;UBERON:0010096!4.71e-09!2;UBERON:0001017!1.08e-08!73;UBERON:0005743!1.08e-08!73;UBERON:0002616!1.88e-08!49;UBERON:0000073!2.15e-08!75;UBERON:0001016!2.15e-08!75;UBERON:0007811!4.29e-08!86;UBERON:0001049!7.02e-08!52;UBERON:0005068!7.02e-08!52;UBERON:0006241!7.02e-08!52;UBERON:0007135!7.02e-08!52;UBERON:0000033!1.83e-07!63;UBERON:0000153!3.55e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,8.39e-23,1;UBERON:0005889,8.39e-23,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.6725259212009,0.125654352112864,1.39059456153821,1.53429274398198,0.83115217823824,5.51620294430376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@Scn4b | |||
}} |
Revision as of 18:00, 14 September 2013
Short description: | p20@Scn4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_Scn4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -131bp_to_ENSMUST00000060125_5end |
EntrezGene: | Scn4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortex | 8.39e-23 | 1 |
zygote cortex | 8.39e-23 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.