FFCP PHASE1:Mm9::chr9:14707951..14707964,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:14707951..14707964,+|id=chr9:14707951..14707964,+|ontology_enrichment_celltype=CL:0000791!1.61e-22!9;CL:0000789!1.61e-22!9;CL:0002420!1.61e-22!9;CL:0002419!1.61e-22!9;CL:0000790!1.61e-22!9;CL:0000624!2.77e-20!8;CL:0000838!1.01e-19!12;CL:0000084!4.55e-18!11;CL:0000827!4.55e-18!11;CL:0000542!4.97e-18!13;CL:0000051!4.97e-18!13;CL:0000893!1.70e-15!6;CL:0002489!1.70e-15!6;CL:0000898!1.70e-15!6;CL:0000809!1.70e-15!6;CL:0000810!1.70e-15!6;CL:0000895!1.70e-15!6;CL:0000808!1.70e-15!6;CL:0000894!1.70e-15!6;CL:0000806!1.70e-15!6;CL:0000807!1.70e-15!6;CL:0000805!1.70e-15!6;CL:0002425!1.70e-15!6;CL:0002436!1.70e-15!6;CL:0002427!1.70e-15!6;CL:0002428!1.70e-15!6;CL:0002429!1.70e-15!6;CL:0002433!1.70e-15!6;CL:0002431!1.70e-15!6;CL:0002432!1.70e-15!6;CL:0002031!2.54e-14!25;CL:0000738!2.93e-13!17;CL:0002087!2.93e-13!17;CL:0000988!1.64e-10!32;CL:0002032!1.64e-10!32;CL:0000037!1.64e-10!32;CL:0000566!1.64e-10!32;CL:0000837!1.64e-10!32|ontology_enrichment_celltype_v019_2=CL:0000791,4.75e-62,9;CL:0000789,4.75e-62,9;CL:0002420,4.75e-62,9;CL:0002419,4.75e-62,9;CL:0000790,4.75e-62,9;CL:0000624,6.00e-54,8;CL:0000084,9.21e-51,11;CL:0000827,9.21e-51,11;CL:0000838,1.58e-46,12;CL:0000542,6.10e-43,13;CL:0000051,6.10e-43,13;CL:0000893,6.90e-37,6;CL:0002489,6.90e-37,6;CL:0000898,6.90e-37,6;CL:0000809,6.90e-37,6;CL:0000810,6.90e-37,6;CL:0000895,6.90e-37,6;CL:0000808,6.90e-37,6;CL:0000894,6.90e-37,6;CL:0000806,6.90e-37,6;CL:0000807,6.90e-37,6;CL:0000805,6.90e-37,6;CL:0002425,6.90e-37,6;CL:0002436,6.90e-37,6;CL:0002427,6.90e-37,6;CL:0002428,6.90e-37,6;CL:0002429,6.90e-37,6;CL:0002433,6.90e-37,6;CL:0002431,6.90e-37,6;CL:0002432,6.90e-37,6;CL:0000738,8.28e-33,17;CL:0002087,8.28e-33,17;CL:0002031,3.03e-22,25;CL:0000988,2.56e-17,32;CL:0002032,2.56e-17,32;CL:0000037,2.56e-17,32;CL:0000837,2.56e-17,32;CL:0002320,6.12e-12,46;CL:0000134,6.12e-12,46;CL:0000815,1.63e-10,1;CL:0000792,1.63e-10,1;CL:0000219,4.15e-10,54;CL:0000625,1.03e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!2.13e-35!24;UBERON:0004177!7.09e-35!29;UBERON:0002370!2.75e-33!23;UBERON:0000974!2.75e-33!23;UBERON:0004807!2.75e-33!23;UBERON:0005058!2.75e-33!23;UBERON:0003351!2.75e-33!23;UBERON:0009113!2.75e-33!23;UBERON:0003295!2.75e-33!23;UBERON:0009722!2.75e-33!23;UBERON:0005562!2.75e-33!23;UBERON:0007690!2.75e-33!23;UBERON:0006562!1.06e-31!24;UBERON:0001557!1.06e-31!24;UBERON:0001042!1.06e-31!24;UBERON:0008814!1.06e-31!24;UBERON:0009145!1.06e-31!24;UBERON:0002193!5.77e-28!48;UBERON:0000072!1.19e-27!27;UBERON:0002390!1.51e-27!45;UBERON:0003061!1.51e-27!45;UBERON:0001004!2.05e-26!42;UBERON:0000065!1.14e-24!41;UBERON:0000063!3.02e-20!35;UBERON:0005057!2.66e-19!51;UBERON:0002405!8.87e-19!70;UBERON:0005911!9.50e-14!69;UBERON:0000077!1.47e-13!97;UBERON:0001041!1.84e-13!92;UBERON:0003929!1.39e-12!55;UBERON:0003081!2.07e-12!88;UBERON:0002530!3.45e-11!65;UBERON:0002368!3.88e-11!60;UBERON:0004921!8.39e-10!126;UBERON:0004185!8.39e-10!126;UBERON:0000490!1.07e-09!66;UBERON:0001007!1.52e-09!128;UBERON:0001555!1.52e-09!128;UBERON:0007026!1.52e-09!128;UBERON:0004119!2.72e-09!130;UBERON:0000925!2.72e-09!130;UBERON:0006595!2.72e-09!130;UBERON:0000949!1.68e-08!72;UBERON:0003104!2.53e-08!131;UBERON:0009142!2.53e-08!131;UBERON:0001048!1.65e-07!147;UBERON:0000064!2.16e-07!99;UBERON:0000477!6.99e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.07e-13,23;UBERON:0000974,1.07e-13,23;UBERON:0004807,1.07e-13,23;UBERON:0005058,1.07e-13,23;UBERON:0003351,1.07e-13,23;UBERON:0009113,1.07e-13,23;UBERON:0003295,1.07e-13,23;UBERON:0009722,1.07e-13,23;UBERON:0005562,1.07e-13,23;UBERON:0007690,1.07e-13,23;UBERON:0006562,4.00e-13,24;UBERON:0003408,4.00e-13,24;UBERON:0001557,4.00e-13,24;UBERON:0001042,4.00e-13,24;UBERON:0008814,4.00e-13,24;UBERON:0009145,4.00e-13,24;UBERON:0002384,6.12e-12,46;UBERON:0000072,1.18e-11,27;UBERON:0004177,7.61e-11,29;UBERON:0005057,7.61e-11,29;UBERON:0000029,5.62e-10,1;UBERON:0001097,5.62e-10,1;UBERON:0003968,5.62e-10,1;UBERON:0001467,5.62e-10,1;UBERON:0000077,5.81e-09,35;UBERON:0007811,1.04e-08,36;UBERON:0002193,1.05e-08,48;UBERON:0002405,1.05e-08,48;UBERON:0000065,1.26e-07,41;UBERON:0001004,1.94e-07,42;UBERON:0000153,2.92e-07,43;UBERON:0002390,6.27e-07,45;UBERON:0003061,6.27e-07,45|phase1_expression=0,0,0,0,0,0,0,20.9179783975354,1.83025338797167,0.936258105287974,4.62288514208863,1.43589886191606,10.785645985666,4.19617931611188,0,0,0,0.946386496074713,0.411343300817216,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0.546776910884101,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0.25984164595559,0.537080087002444,0.596044064343795,0.841368146639782,0.295379054349154,0.201932899896295,0.609654453239999,0.403304740547362,0.487289403698762,1.34696578296461,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:14707951..14707964,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:14707951..14707964,+ | |||
|id=chr9:14707951..14707964,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.61e-22!9;CL:0000789!1.61e-22!9;CL:0002420!1.61e-22!9;CL:0002419!1.61e-22!9;CL:0000790!1.61e-22!9;CL:0000624!2.77e-20!8;CL:0000838!1.01e-19!12;CL:0000084!4.55e-18!11;CL:0000827!4.55e-18!11;CL:0000542!4.97e-18!13;CL:0000051!4.97e-18!13;CL:0000893!1.70e-15!6;CL:0002489!1.70e-15!6;CL:0000898!1.70e-15!6;CL:0000809!1.70e-15!6;CL:0000810!1.70e-15!6;CL:0000895!1.70e-15!6;CL:0000808!1.70e-15!6;CL:0000894!1.70e-15!6;CL:0000806!1.70e-15!6;CL:0000807!1.70e-15!6;CL:0000805!1.70e-15!6;CL:0002425!1.70e-15!6;CL:0002436!1.70e-15!6;CL:0002427!1.70e-15!6;CL:0002428!1.70e-15!6;CL:0002429!1.70e-15!6;CL:0002433!1.70e-15!6;CL:0002431!1.70e-15!6;CL:0002432!1.70e-15!6;CL:0002031!2.54e-14!25;CL:0000738!2.93e-13!17;CL:0002087!2.93e-13!17;CL:0000988!1.64e-10!32;CL:0002032!1.64e-10!32;CL:0000037!1.64e-10!32;CL:0000566!1.64e-10!32;CL:0000837!1.64e-10!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.75e-62,9;CL:0000789,4.75e-62,9;CL:0002420,4.75e-62,9;CL:0002419,4.75e-62,9;CL:0000790,4.75e-62,9;CL:0000624,6.00e-54,8;CL:0000084,9.21e-51,11;CL:0000827,9.21e-51,11;CL:0000838,1.58e-46,12;CL:0000542,6.10e-43,13;CL:0000051,6.10e-43,13;CL:0000893,6.90e-37,6;CL:0002489,6.90e-37,6;CL:0000898,6.90e-37,6;CL:0000809,6.90e-37,6;CL:0000810,6.90e-37,6;CL:0000895,6.90e-37,6;CL:0000808,6.90e-37,6;CL:0000894,6.90e-37,6;CL:0000806,6.90e-37,6;CL:0000807,6.90e-37,6;CL:0000805,6.90e-37,6;CL:0002425,6.90e-37,6;CL:0002436,6.90e-37,6;CL:0002427,6.90e-37,6;CL:0002428,6.90e-37,6;CL:0002429,6.90e-37,6;CL:0002433,6.90e-37,6;CL:0002431,6.90e-37,6;CL:0002432,6.90e-37,6;CL:0000738,8.28e-33,17;CL:0002087,8.28e-33,17;CL:0002031,3.03e-22,25;CL:0000988,2.56e-17,32;CL:0002032,2.56e-17,32;CL:0000037,2.56e-17,32;CL:0000837,2.56e-17,32;CL:0002320,6.12e-12,46;CL:0000134,6.12e-12,46;CL:0000815,1.63e-10,1;CL:0000792,1.63e-10,1;CL:0000219,4.15e-10,54;CL:0000625,1.03e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!2.13e-35!24;UBERON:0004177!7.09e-35!29;UBERON:0002370!2.75e-33!23;UBERON:0000974!2.75e-33!23;UBERON:0004807!2.75e-33!23;UBERON:0005058!2.75e-33!23;UBERON:0003351!2.75e-33!23;UBERON:0009113!2.75e-33!23;UBERON:0003295!2.75e-33!23;UBERON:0009722!2.75e-33!23;UBERON:0005562!2.75e-33!23;UBERON:0007690!2.75e-33!23;UBERON:0006562!1.06e-31!24;UBERON:0001557!1.06e-31!24;UBERON:0001042!1.06e-31!24;UBERON:0008814!1.06e-31!24;UBERON:0009145!1.06e-31!24;UBERON:0002193!5.77e-28!48;UBERON:0000072!1.19e-27!27;UBERON:0002390!1.51e-27!45;UBERON:0003061!1.51e-27!45;UBERON:0001004!2.05e-26!42;UBERON:0000065!1.14e-24!41;UBERON:0000063!3.02e-20!35;UBERON:0005057!2.66e-19!51;UBERON:0002405!8.87e-19!70;UBERON:0005911!9.50e-14!69;UBERON:0000077!1.47e-13!97;UBERON:0001041!1.84e-13!92;UBERON:0003929!1.39e-12!55;UBERON:0003081!2.07e-12!88;UBERON:0002530!3.45e-11!65;UBERON:0002368!3.88e-11!60;UBERON:0004921!8.39e-10!126;UBERON:0004185!8.39e-10!126;UBERON:0000490!1.07e-09!66;UBERON:0001007!1.52e-09!128;UBERON:0001555!1.52e-09!128;UBERON:0007026!1.52e-09!128;UBERON:0004119!2.72e-09!130;UBERON:0000925!2.72e-09!130;UBERON:0006595!2.72e-09!130;UBERON:0000949!1.68e-08!72;UBERON:0003104!2.53e-08!131;UBERON:0009142!2.53e-08!131;UBERON:0001048!1.65e-07!147;UBERON:0000064!2.16e-07!99;UBERON:0000477!6.99e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.07e-13,23;UBERON:0000974,1.07e-13,23;UBERON:0004807,1.07e-13,23;UBERON:0005058,1.07e-13,23;UBERON:0003351,1.07e-13,23;UBERON:0009113,1.07e-13,23;UBERON:0003295,1.07e-13,23;UBERON:0009722,1.07e-13,23;UBERON:0005562,1.07e-13,23;UBERON:0007690,1.07e-13,23;UBERON:0006562,4.00e-13,24;UBERON:0003408,4.00e-13,24;UBERON:0001557,4.00e-13,24;UBERON:0001042,4.00e-13,24;UBERON:0008814,4.00e-13,24;UBERON:0009145,4.00e-13,24;UBERON:0002384,6.12e-12,46;UBERON:0000072,1.18e-11,27;UBERON:0004177,7.61e-11,29;UBERON:0005057,7.61e-11,29;UBERON:0000029,5.62e-10,1;UBERON:0001097,5.62e-10,1;UBERON:0003968,5.62e-10,1;UBERON:0001467,5.62e-10,1;UBERON:0000077,5.81e-09,35;UBERON:0007811,1.04e-08,36;UBERON:0002193,1.05e-08,48;UBERON:0002405,1.05e-08,48;UBERON:0000065,1.26e-07,41;UBERON:0001004,1.94e-07,42;UBERON:0000153,2.92e-07,43;UBERON:0002390,6.27e-07,45;UBERON:0003061,6.27e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,20.9179783975354,1.83025338797167,0.936258105287974,4.62288514208863,1.43589886191606,10.785645985666,4.19617931611188,0,0,0,0.946386496074713,0.411343300817216,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0.546776910884101,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.205421914329655,0.25984164595559,0.537080087002444,0.596044064343795,0.841368146639782,0.295379054349154,0.201932899896295,0.609654453239999,0.403304740547362,0.487289403698762,1.34696578296461,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:14707951..14707964,+ | |||
}} |
Revision as of 17:21, 14 September 2013
Short description: | p@chr9:14707951..14707964, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:14707951..14707964, + |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.07e-13 | 23 |
neck | 1.07e-13 | 23 |
respiratory system epithelium | 1.07e-13 | 23 |
hemolymphoid system gland | 1.07e-13 | 23 |
pharyngeal epithelium | 1.07e-13 | 23 |
thymic region | 1.07e-13 | 23 |
pharyngeal gland | 1.07e-13 | 23 |
entire pharyngeal arch endoderm | 1.07e-13 | 23 |
thymus primordium | 1.07e-13 | 23 |
early pharyngeal endoderm | 1.07e-13 | 23 |
pharynx | 4.00e-13 | 24 |
gland of gut | 4.00e-13 | 24 |
upper respiratory tract | 4.00e-13 | 24 |
chordate pharynx | 4.00e-13 | 24 |
pharyngeal arch system | 4.00e-13 | 24 |
pharyngeal region of foregut | 4.00e-13 | 24 |
connective tissue | 6.12e-12 | 46 |
segment of respiratory tract | 1.18e-11 | 27 |
hemopoietic organ | 7.61e-11 | 29 |
immune organ | 7.61e-11 | 29 |
lymph node | 5.62e-10 | 1 |
axillary lymph node | 5.62e-10 | 1 |
peripheral lymph node | 5.62e-10 | 1 |
shoulder | 5.62e-10 | 1 |
mixed endoderm/mesoderm-derived structure | 5.81e-09 | 35 |
craniocervical region | 1.04e-08 | 36 |
hemolymphoid system | 1.05e-08 | 48 |
immune system | 1.05e-08 | 48 |
respiratory tract | 1.26e-07 | 41 |
respiratory system | 1.94e-07 | 42 |
anterior region of body | 2.92e-07 | 43 |
hematopoietic system | 6.27e-07 | 45 |
blood island | 6.27e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.