FFCP PHASE1:Mm9::chr8:83335499..83335501,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=550|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:83335499..83335501,+|id=chr8:83335499..83335501,+|ontology_enrichment_celltype=CL:0000473!6.31e-17!3;CL:0000627!6.31e-17!3;CL:0000682!6.31e-17!3;CL:0000239!1.11e-15!6;CL:0000677!1.11e-15!6;CL:0000212!1.11e-15!6;CL:0000584!1.11e-15!6;CL:0000075!1.79e-13!7;CL:0002563!1.59e-10!9;CL:0002251!1.59e-10!9;CL:0000066!1.98e-10!25|ontology_enrichment_celltype_v019_2=CL:0000239,1.71e-29,6;CL:0000677,1.71e-29,6;CL:0000584,1.71e-29,6;CL:0000075,2.28e-25,7;CL:0002563,7.35e-20,9;CL:0002251,7.35e-20,9;CL:0002076,4.10e-12,15;CL:0000223,3.45e-09,20;CL:0000066,2.02e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.56e-24!15;UBERON:0001242!1.16e-15!13;UBERON:0000060!1.16e-15!13;UBERON:0001262!1.16e-15!13;UBERON:0004786!1.16e-15!13;UBERON:0004923!1.47e-14!24;UBERON:0001962!1.56e-12!2;UBERON:0001961!1.56e-12!2;UBERON:0001744!1.56e-12!2;UBERON:0000160!9.44e-12!43;UBERON:0003350!1.59e-10!9;UBERON:0004808!1.59e-10!9;UBERON:0001277!1.59e-10!9;UBERON:0000331!1.20e-08!3;UBERON:0002116!1.20e-08!3;UBERON:0001204!1.20e-08!3;UBERON:0002465!1.20e-08!3;UBERON:0001168!1.20e-08!3;UBERON:0000485!1.22e-08!11;UBERON:0005409!3.30e-08!59;UBERON:0003199!4.68e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.35e-46,15;UBERON:0001242,2.81e-30,13;UBERON:0001262,2.81e-30,13;UBERON:0004786,2.81e-30,13;UBERON:0004923,4.66e-29,24;UBERON:0001962,8.47e-23,2;UBERON:0001961,8.47e-23,2;UBERON:0001744,8.47e-23,2;UBERON:0003350,7.35e-20,9;UBERON:0004808,7.35e-20,9;UBERON:0001277,7.35e-20,9;UBERON:0000485,2.40e-16,11;UBERON:0000331,1.46e-15,3;UBERON:0002116,1.46e-15,3;UBERON:0001204,1.46e-15,3;UBERON:0002465,1.46e-15,3;UBERON:0001168,1.46e-15,3;UBERON:0000160,8.27e-13,31;UBERON:0003199,3.34e-12,1;UBERON:0002108,6.31e-12,4;UBERON:0005409,1.83e-08,47|phase1_expression=0,1.04692622291808,0,8.46899791659124,5.50985302940982,0,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,3.21172993494038,0.57423196411502,0.86152399231815,0.430942465371778,6.27077284206034,1.26015064879965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:83335499..83335501,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=550 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:83335499..83335501,+ | |||
|id=chr8:83335499..83335501,+ | |||
|ontology_enrichment_celltype=CL:0000473!6.31e-17!3;CL:0000627!6.31e-17!3;CL:0000682!6.31e-17!3;CL:0000239!1.11e-15!6;CL:0000677!1.11e-15!6;CL:0000212!1.11e-15!6;CL:0000584!1.11e-15!6;CL:0000075!1.79e-13!7;CL:0002563!1.59e-10!9;CL:0002251!1.59e-10!9;CL:0000066!1.98e-10!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.71e-29,6;CL:0000677,1.71e-29,6;CL:0000584,1.71e-29,6;CL:0000075,2.28e-25,7;CL:0002563,7.35e-20,9;CL:0002251,7.35e-20,9;CL:0002076,4.10e-12,15;CL:0000223,3.45e-09,20;CL:0000066,2.02e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.56e-24!15;UBERON:0001242!1.16e-15!13;UBERON:0000060!1.16e-15!13;UBERON:0001262!1.16e-15!13;UBERON:0004786!1.16e-15!13;UBERON:0004923!1.47e-14!24;UBERON:0001962!1.56e-12!2;UBERON:0001961!1.56e-12!2;UBERON:0001744!1.56e-12!2;UBERON:0000160!9.44e-12!43;UBERON:0003350!1.59e-10!9;UBERON:0004808!1.59e-10!9;UBERON:0001277!1.59e-10!9;UBERON:0000331!1.20e-08!3;UBERON:0002116!1.20e-08!3;UBERON:0001204!1.20e-08!3;UBERON:0002465!1.20e-08!3;UBERON:0001168!1.20e-08!3;UBERON:0000485!1.22e-08!11;UBERON:0005409!3.30e-08!59;UBERON:0003199!4.68e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.35e-46,15;UBERON:0001242,2.81e-30,13;UBERON:0001262,2.81e-30,13;UBERON:0004786,2.81e-30,13;UBERON:0004923,4.66e-29,24;UBERON:0001962,8.47e-23,2;UBERON:0001961,8.47e-23,2;UBERON:0001744,8.47e-23,2;UBERON:0003350,7.35e-20,9;UBERON:0004808,7.35e-20,9;UBERON:0001277,7.35e-20,9;UBERON:0000485,2.40e-16,11;UBERON:0000331,1.46e-15,3;UBERON:0002116,1.46e-15,3;UBERON:0001204,1.46e-15,3;UBERON:0002465,1.46e-15,3;UBERON:0001168,1.46e-15,3;UBERON:0000160,8.27e-13,31;UBERON:0003199,3.34e-12,1;UBERON:0002108,6.31e-12,4;UBERON:0005409,1.83e-08,47 | |||
|phase1_expression=0,1.04692622291808,0,8.46899791659124,5.50985302940982,0,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,3.21172993494038,0.57423196411502,0.86152399231815,0.430942465371778,6.27077284206034,1.26015064879965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:83335499..83335501,+ | |||
}} |
Revision as of 16:09, 14 September 2013
Short description: | p@chr8:83335499..83335501, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:83335499..83335501, + |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.71e-29 | 6 |
gut absorptive cell | 1.71e-29 | 6 |
enterocyte | 1.71e-29 | 6 |
columnar/cuboidal epithelial cell | 2.28e-25 | 7 |
intestinal epithelial cell | 7.35e-20 | 9 |
epithelial cell of alimentary canal | 7.35e-20 | 9 |
endo-epithelial cell | 4.10e-12 | 15 |
endodermal cell | 3.45e-09 | 20 |
epithelial cell | 2.02e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.35e-46 | 15 |
intestinal mucosa | 2.81e-30 | 13 |
wall of intestine | 2.81e-30 | 13 |
gastrointestinal system mucosa | 2.81e-30 | 13 |
organ component layer | 4.66e-29 | 24 |
gut-associated lymphoid tissue | 8.47e-23 | 2 |
mucosa-associated lymphoid tissue | 8.47e-23 | 2 |
lymphoid tissue | 8.47e-23 | 2 |
epithelium of mucosa | 7.35e-20 | 9 |
gastrointestinal system epithelium | 7.35e-20 | 9 |
intestinal epithelium | 7.35e-20 | 9 |
simple columnar epithelium | 2.40e-16 | 11 |
ileal mucosa | 1.46e-15 | 3 |
ileum | 1.46e-15 | 3 |
mucosa of small intestine | 1.46e-15 | 3 |
lymphoid system | 1.46e-15 | 3 |
wall of small intestine | 1.46e-15 | 3 |
intestine | 8.27e-13 | 31 |
egg chamber | 3.34e-12 | 1 |
small intestine | 6.31e-12 | 4 |
gastrointestinal system | 1.83e-08 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.