FFCP PHASE1:Mm9::chr8:67653480..67653498,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=407795|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=-44bp_to_NR_033217,uc009lvi.2_5end|description=CAGE_peak_4_at_BC030870_5end|id=chr8:67653480..67653498,-|ontology_enrichment_celltype=CL:0002563!1.52e-11!9;CL:0002251!1.52e-11!9;CL:0000239!1.06e-08!6;CL:0000677!1.06e-08!6;CL:0000212!1.06e-08!6;CL:0000584!1.06e-08!6;CL:0002076!1.21e-08!15;CL:0000066!1.98e-07!25;CL:0000075!2.90e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,8.92e-19,6;CL:0000677,8.92e-19,6;CL:0000584,8.92e-19,6;CL:0002563,2.79e-16,9;CL:0002251,2.79e-16,9;CL:0000075,5.19e-16,7;CL:0000066,5.81e-11,25;CL:0000682,1.73e-10,3;CL:0002076,2.11e-09,15;CL:0000223,8.03e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.03e-23!43;UBERON:0005409!1.24e-20!59;UBERON:0000344!5.23e-19!15;UBERON:0001242!2.64e-16!13;UBERON:0000060!2.64e-16!13;UBERON:0001262!2.64e-16!13;UBERON:0004786!2.64e-16!13;UBERON:0001007!1.97e-13!128;UBERON:0001555!1.97e-13!128;UBERON:0007026!1.97e-13!128;UBERON:0004119!5.42e-13!130;UBERON:0000925!5.42e-13!130;UBERON:0006595!5.42e-13!130;UBERON:0004921!6.58e-12!126;UBERON:0004185!6.58e-12!126;UBERON:0003350!1.52e-11!9;UBERON:0004808!1.52e-11!9;UBERON:0001277!1.52e-11!9;UBERON:0004923!5.42e-10!24;UBERON:0000485!5.55e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.24e-48,31;UBERON:0000344,1.30e-33,15;UBERON:0005409,1.42e-30,47;UBERON:0001242,2.59e-27,13;UBERON:0001262,2.59e-27,13;UBERON:0004786,2.59e-27,13;UBERON:0004923,5.10e-20,24;UBERON:0003350,2.79e-16,9;UBERON:0004808,2.79e-16,9;UBERON:0001277,2.79e-16,9;UBERON:0000485,3.72e-13,11;UBERON:0002108,1.77e-12,4;UBERON:0001007,3.07e-12,116;UBERON:0001555,3.07e-12,116;UBERON:0007026,3.07e-12,116;UBERON:0004119,5.98e-12,118;UBERON:0000925,5.98e-12,118;UBERON:0006595,5.98e-12,118;UBERON:0004921,6.25e-10,114;UBERON:0000331,1.03e-09,3;UBERON:0002116,1.03e-09,3;UBERON:0001204,1.03e-09,3;UBERON:0001168,1.03e-09,3;UBERON:0001962,5.09e-08,2;UBERON:0001961,5.09e-08,2;UBERON:0001744,5.09e-08,2|phase1_expression=0,6.63053274514786,9.09998478779072,9.0739263392049,12.0214975187123,4.02910252588535,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,13.1193786690593,13.7645568640302,8.03924749761028,8.61523992318149,7.32602191132023,6.46079626151671,6.30075324399827,1.99557459589774,0,0,0,1.44425809875637,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5296828002385,9.52022039988759,0,0,0.515469845288373,3.42861991859682,3.55804870151792,4.75564065281398,5.21981967698963,3.29397909448022,0.754005626400808,1.39269530428806,0.974820435595601,4.49409704327111,6.70027954611552,11.5501938487533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0,0.945810864637146,0.8858587585951,0.318909537314974,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0.377252682772152,0,0.192075457214608,0.17230640686684,0,0.231768651889711,0,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p4@BC030870}} | ||
|EntrezGene=407795 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt= | |||
|association_with_transcript=-44bp_to_NR_033217,uc009lvi.2_5end | |||
|description=CAGE_peak_4_at_BC030870_5end | |||
|id=chr8:67653480..67653498,- | |||
|ontology_enrichment_celltype=CL:0002563!1.52e-11!9;CL:0002251!1.52e-11!9;CL:0000239!1.06e-08!6;CL:0000677!1.06e-08!6;CL:0000212!1.06e-08!6;CL:0000584!1.06e-08!6;CL:0002076!1.21e-08!15;CL:0000066!1.98e-07!25;CL:0000075!2.90e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.92e-19,6;CL:0000677,8.92e-19,6;CL:0000584,8.92e-19,6;CL:0002563,2.79e-16,9;CL:0002251,2.79e-16,9;CL:0000075,5.19e-16,7;CL:0000066,5.81e-11,25;CL:0000682,1.73e-10,3;CL:0002076,2.11e-09,15;CL:0000223,8.03e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.03e-23!43;UBERON:0005409!1.24e-20!59;UBERON:0000344!5.23e-19!15;UBERON:0001242!2.64e-16!13;UBERON:0000060!2.64e-16!13;UBERON:0001262!2.64e-16!13;UBERON:0004786!2.64e-16!13;UBERON:0001007!1.97e-13!128;UBERON:0001555!1.97e-13!128;UBERON:0007026!1.97e-13!128;UBERON:0004119!5.42e-13!130;UBERON:0000925!5.42e-13!130;UBERON:0006595!5.42e-13!130;UBERON:0004921!6.58e-12!126;UBERON:0004185!6.58e-12!126;UBERON:0003350!1.52e-11!9;UBERON:0004808!1.52e-11!9;UBERON:0001277!1.52e-11!9;UBERON:0004923!5.42e-10!24;UBERON:0000485!5.55e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.24e-48,31;UBERON:0000344,1.30e-33,15;UBERON:0005409,1.42e-30,47;UBERON:0001242,2.59e-27,13;UBERON:0001262,2.59e-27,13;UBERON:0004786,2.59e-27,13;UBERON:0004923,5.10e-20,24;UBERON:0003350,2.79e-16,9;UBERON:0004808,2.79e-16,9;UBERON:0001277,2.79e-16,9;UBERON:0000485,3.72e-13,11;UBERON:0002108,1.77e-12,4;UBERON:0001007,3.07e-12,116;UBERON:0001555,3.07e-12,116;UBERON:0007026,3.07e-12,116;UBERON:0004119,5.98e-12,118;UBERON:0000925,5.98e-12,118;UBERON:0006595,5.98e-12,118;UBERON:0004921,6.25e-10,114;UBERON:0000331,1.03e-09,3;UBERON:0002116,1.03e-09,3;UBERON:0001204,1.03e-09,3;UBERON:0001168,1.03e-09,3;UBERON:0001962,5.09e-08,2;UBERON:0001961,5.09e-08,2;UBERON:0001744,5.09e-08,2 | |||
|phase1_expression=0,6.63053274514786,9.09998478779072,9.0739263392049,12.0214975187123,4.02910252588535,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,13.1193786690593,13.7645568640302,8.03924749761028,8.61523992318149,7.32602191132023,6.46079626151671,6.30075324399827,1.99557459589774,0,0,0,1.44425809875637,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5296828002385,9.52022039988759,0,0,0.515469845288373,3.42861991859682,3.55804870151792,4.75564065281398,5.21981967698963,3.29397909448022,0.754005626400808,1.39269530428806,0.974820435595601,4.49409704327111,6.70027954611552,11.5501938487533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0,0.945810864637146,0.8858587585951,0.318909537314974,0.163863314715738,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0.377252682772152,0,0.192075457214608,0.17230640686684,0,0.231768651889711,0,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p4@BC030870 | |||
}} |
Revision as of 15:52, 14 September 2013
Short description: | p4@BC030870 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BC030870_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -44bp_to_NR_033217, uc009lvi.2_5end |
EntrezGene: | BC030870 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.92e-19 | 6 |
gut absorptive cell | 8.92e-19 | 6 |
enterocyte | 8.92e-19 | 6 |
intestinal epithelial cell | 2.79e-16 | 9 |
epithelial cell of alimentary canal | 2.79e-16 | 9 |
columnar/cuboidal epithelial cell | 5.19e-16 | 7 |
epithelial cell | 5.81e-11 | 25 |
M cell of gut | 1.73e-10 | 3 |
endo-epithelial cell | 2.11e-09 | 15 |
endodermal cell | 8.03e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.24e-48 | 31 |
mucosa | 1.30e-33 | 15 |
gastrointestinal system | 1.42e-30 | 47 |
intestinal mucosa | 2.59e-27 | 13 |
wall of intestine | 2.59e-27 | 13 |
gastrointestinal system mucosa | 2.59e-27 | 13 |
organ component layer | 5.10e-20 | 24 |
epithelium of mucosa | 2.79e-16 | 9 |
gastrointestinal system epithelium | 2.79e-16 | 9 |
intestinal epithelium | 2.79e-16 | 9 |
simple columnar epithelium | 3.72e-13 | 11 |
small intestine | 1.77e-12 | 4 |
digestive system | 3.07e-12 | 116 |
digestive tract | 3.07e-12 | 116 |
primitive gut | 3.07e-12 | 116 |
endoderm-derived structure | 5.98e-12 | 118 |
endoderm | 5.98e-12 | 118 |
presumptive endoderm | 5.98e-12 | 118 |
subdivision of digestive tract | 6.25e-10 | 114 |
ileal mucosa | 1.03e-09 | 3 |
ileum | 1.03e-09 | 3 |
mucosa of small intestine | 1.03e-09 | 3 |
wall of small intestine | 1.03e-09 | 3 |
gut-associated lymphoid tissue | 5.09e-08 | 2 |
mucosa-associated lymphoid tissue | 5.09e-08 | 2 |
lymphoid tissue | 5.09e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.