FFCP PHASE1:Mm9::chr8:34763961..34764020,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14782|HGNC=|MCL_coexpression_id=3|UniProt=F6ZDD7|association_with_transcript=-41bp_to_ENSMUST00000163254_5end|description=CAGE_peak_2_at_Gsr_5end|id=chr8:34763961..34764020,+|ontology_enrichment_celltype=CL:0000066!1.91e-08!25;CL:0000223!1.40e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,1.91e-08,25;CL:0000223,1.40e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!2.40e-09!128;UBERON:0001555!2.40e-09!128;UBERON:0007026!2.40e-09!128;UBERON:0002405!2.68e-09!70;UBERON:0004119!5.18e-09!130;UBERON:0000925!5.18e-09!130;UBERON:0006595!5.18e-09!130;UBERON:0005172!5.52e-09!49;UBERON:0005173!5.52e-09!49;UBERON:0002417!5.52e-09!49;UBERON:0000916!5.52e-09!49;UBERON:0004921!1.05e-08!126;UBERON:0004185!1.05e-08!126;UBERON:0009854!5.83e-08!23;UBERON:0009856!5.83e-08!23;UBERON:0002107!6.75e-08!22;UBERON:0007499!6.75e-08!22;UBERON:0006925!6.75e-08!22;UBERON:0009497!6.75e-08!22;UBERON:0000015!6.75e-08!22;UBERON:0002423!6.75e-08!22;UBERON:0006235!6.75e-08!22;UBERON:0008835!6.75e-08!22;UBERON:0003894!6.75e-08!22;UBERON:0004161!6.75e-08!22;UBERON:0008836!6.75e-08!22;UBERON:0000490!8.69e-08!66;UBERON:0009569!2.87e-07!66;UBERON:0000344!3.95e-07!15;UBERON:0002204!5.17e-07!32;UBERON:0003104!5.31e-07!131;UBERON:0009142!5.31e-07!131;UBERON:0004923!7.20e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.62e-10,116;UBERON:0001555,6.62e-10,116;UBERON:0007026,6.62e-10,116;UBERON:0003104,1.53e-09,61;UBERON:0009142,1.53e-09,61;UBERON:0004119,1.55e-09,118;UBERON:0000925,1.55e-09,118;UBERON:0006595,1.55e-09,118;UBERON:0004921,3.05e-09,114;UBERON:0005172,5.52e-09,49;UBERON:0005173,5.52e-09,49;UBERON:0002417,5.52e-09,49;UBERON:0000916,5.52e-09,49;UBERON:0009854,5.83e-08,23;UBERON:0009856,5.83e-08,23;UBERON:0002107,6.75e-08,22;UBERON:0007499,6.75e-08,22;UBERON:0006925,6.75e-08,22;UBERON:0009497,6.75e-08,22;UBERON:0000015,6.75e-08,22;UBERON:0002423,6.75e-08,22;UBERON:0006235,6.75e-08,22;UBERON:0008835,6.75e-08,22;UBERON:0003894,6.75e-08,22;UBERON:0004161,6.75e-08,22;UBERON:0008836,6.75e-08,22;UBERON:0000490,8.74e-08,66;UBERON:0005409,2.33e-07,47;UBERON:0002100,2.76e-07,90;UBERON:0009569,2.87e-07,66;UBERON:0000344,3.95e-07,15;UBERON:0000160,4.76e-07,31;UBERON:0002204,5.17e-07,32;UBERON:0004923,7.20e-07,24;UBERON:0005256,8.95e-07,45|phase1_expression=12.0111635328595,45.7157784007563,43.2249277420059,53.2337011900021,47.585094344903,25.853407874431,47.6569786814872,4.13194635013044,4.50523910885334,0.70219357896598,10.1018601253048,5.90313976565489,6.67682846731702,2.88487327982691,30.9792078488566,24.0945568193893,38.4759032970481,9.30613387806801,9.32378148519024,8.06340338416257,27.979242459702,8.43973085207525,9.14199261986274,35.0383405917561,41.5230798731578,41.9189333803965,60.3066794622705,56.6689341963888,64.9880094540799,75.6090389279792,119.512745243209,29.211410979143,20.9122027778754,0,21.9527231010969,21.7767385419625,17.9669033510885,401.371833876694,357.851587791901,314.637770128253,364.703522579229,385.237653516563,308.299074174783,15.485308610996,17.8423398946346,5.32285581268876,21.1245662973971,37.5003268974368,40.2025714404083,32.6642230444796,23.6577052546863,44.5632949531412,0.671130424230945,7.25362142011344,5.37750078627942,24.439646423415,23.2092086350393,21.1425557833751,7.28339259094552,5.28990979272033,3.80298842103708,13.2149367506962,24.9002542911119,54.8938827541653,56.3653826663175,66.0746506899873,47.3368174619079,51.4852529130883,8.19147937236973,8.6403800532282,9.04397333810943,14.8538511889978,16.7860091123226,7.59442955132715,7.57179221044067,4.5960939330501,18.7196997698961,14.1732945274558,11.366883460962,5.14356522147756,5.48925861614458,5.73004707612436,11.725685958058,14.069065250792,13.4462458043593,9.72274332063103,10.5355043791336,7.64237727883732,25.1410961866171,28.7927644006853,14.2033599463822,51.6254326188832,106.755499392117,72.3202276794675,40.9359142992032,45.6987424839282,44.0995479213701,17.5543232255399,17.6654483129951,15.546941278455,16.0561498545416,21.815501160434,15.2883143823987,21.3320010945999,62.3494198112297,61.0597275794988,62.1795067368183,44.6458969701524,13.2058320660058,12.3206975423805,12.3174582003956,17.0500667854799,20.5247792557892,20.0461111934988,16.2272415847273,21.9916534826932,35.3488803860155,13.5923395504717,74.3072863637894,17.9561203441624,27.6051898075492,25.2135131630315,20.5030937339934,9.66176630138106,5.44561437714983,47.2595552135894,30.9123021225274,35.394261128611,43.9662985672804,6.14141621559773,9.60751265919116,10.9319286338192,7.12679712788333,8.18289463457058,9.55825004973976,5.353961681236,15.4795833052481,36.4512423887573,10.108910337347,9.25944165900485,5.98554037628437,11.0353010128067,7.02242306240862,8.28876498096433,10.6136938676071,9.09607414022434,8.4331552103756,7.50239775143145,9.26942369611222,5.48407632486676,6.68614271823006,7.67185063496512,5.56094498451196,8.358051996532,7.40815691068596,8.16040493955822,60.3903341089382,89.0423758616914,109.402947267303,8.28503090142008,9.14651633926275,11.1638478105829,8.75955521665278,10.6252685143598,10.3358965634543,12.556833016522,11.8040296615832,9.69152341647507,10.5318303944627,8.04420573987567,8.18794976413143,9.9415991449226,8.78200461164202,12.7496097822353,5.46753866266731,9.57012895127345,31.059365600477,72.9883563991382,5.75878276445132,6.96710015581316,14.3042882067524,24.8070735286711,22.9049385160216,31.0067770563471,24.6755112003146,23.0578536613615,17.8447998248191,20.0946036761562,14.0374142725766,35.0539569375146,23.342909386467,21.706398784726,14.035424670528,14.2810640762161,16.9061603509621,20.1614814566861,23.4682509472827,45.3077396491458,31.8712147106257,43.8402139499418,46.0006272575228,52.6905889946088,40.0211046567651,19.6877224744991,23.7836384086976,28.7823503852613,25.5603752949514,32.0765622470714,30.0458505102075,25.892652370573,35.8318851172828,22.2394744682346,40.2550978276593,23.0727387554472,19.0342980599882,33.845569644913,41.6201999370836,37.1481511449793,18.4753190166605,10.6115190591471,7.82231886921724,8.65699937453459,9.38760993154008,14.2380318825543,12.1402256851867,18.5376965464909,12.6108115284953,9.30151696524855,9.8861956567642,15.4031515832794,15.1962784041988,14.4649058581512,27.142431109069,49.4954172275026,9.83528546038072,5.51873492609465,7.70642831941401,6.56385444916338,14.0984053023941,21.2075578851673,18.9304931649754,16.7888660047555,12.0637102730367,20.0733790280144,23.171062104569,15.0030561318081,18.2164815753702,17.2430956167674,14.2303600060748,3.85585579706168,16.1811697137426,15.8478387263857,15.6371480979433,12.5377293459127,11.9470624505967,9.22566417388929,16.9301191900261,16.9744571780308,20.0805287158925,15.3717573971964,17.8315522286073,11.9966130727577,17.1118741624666,11.6933600436252,9.48767477174989,19.5957532171555,6.80879211507576,9.36317688962813,8.27895576209629,7.71613326113732,7.44828981297549,8.38333442729732,7.0756078858912,7.30715877875038,15.7230044402686,8.26145076368899,10.8058915046931,5.27636009412736,9.20347232166662,10.2531972377865,9.31104283224465,12.3105674808796,22.1525435838687,9.45669040253599,27.85195357005,19.1939787205797,28.3347626875659,23.5460571255864,14.6262823661497,16.9295848172827,18.1876920093425,20.5728634915777,20.5917960968591,37.2321541025894,7.59206384594725,11.3858901591035,14.5807210109432,12.7543860568826,20.5260809921407,16.7231789517178,18.0184533481232,25.6520823144349,22.2937754061884,12.4267862617385,8.45539408026285,10.4661582230785,9.76205093696876,17.3061557626202,12.6576627008176,11.9958849098453,15.8432272171768,16.1453437206498,23.1739151180821,7.73069186643219,8.64090018773596,17.696622755178,13.1771389938607,23.4180982335806,32.9998890363599,23.4524971324401,22.6496744450642,20.5534218679147,19.3473280598696,16.7604306913925,21.261699056745,13.3090564380629,13.1568138998666,15.8749538706544,14.8433665770593,9.9761368790693,7.32553646134413,3.76798197759798,5.03653849092235,13.9096507703177,18.9559300205694,34.0662021137113,10.2896821957952,6.01886524842436,11.2950368523413,10.1271552031579,8.59343270159095,9.10821866421544,7.53590771747707,6.0431511791176,7.42524750254986,4.05289082901798,8.15656336171568,9.31968561153276,8.61434984948666,5.98537310101547,10.5854835567563,15.8019366094391,16.5594398476106,17.0974462858513,12.4458167568905,14.4224540067226,12.5158491740808,14.6564382823003,14.1948407938534,13.3924702384114,11.5179054187955,13.5733323098323,11.7168356669451,13.3362233559261,16.1079213063349,15.6256468575601,12.7746629249025,14.5726930933053,10.6289468239479,11.8908790126756,11.4449371174714,14.8253344964975,11.669563171501,13.0306496153182,12.4391021553485,11.0489278803894,13.3088031568945,14.0285567914435,15.7784574105152,11.8205378850676,9.82154503607254,11.7751999301334,15.4325288784913,8.74337022782811,15.6734177658424,13.5368764050428,16.8333732220582,19.8532277207564,15.5351449865682|short_description=p2@Gsr}} | ||
|EntrezGene=14782 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=F6ZDD7 | |||
|association_with_transcript=-41bp_to_ENSMUST00000163254_5end | |||
|description=CAGE_peak_2_at_Gsr_5end | |||
|id=chr8:34763961..34764020,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.91e-08!25;CL:0000223!1.40e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.91e-08,25;CL:0000223,1.40e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!2.40e-09!128;UBERON:0001555!2.40e-09!128;UBERON:0007026!2.40e-09!128;UBERON:0002405!2.68e-09!70;UBERON:0004119!5.18e-09!130;UBERON:0000925!5.18e-09!130;UBERON:0006595!5.18e-09!130;UBERON:0005172!5.52e-09!49;UBERON:0005173!5.52e-09!49;UBERON:0002417!5.52e-09!49;UBERON:0000916!5.52e-09!49;UBERON:0004921!1.05e-08!126;UBERON:0004185!1.05e-08!126;UBERON:0009854!5.83e-08!23;UBERON:0009856!5.83e-08!23;UBERON:0002107!6.75e-08!22;UBERON:0007499!6.75e-08!22;UBERON:0006925!6.75e-08!22;UBERON:0009497!6.75e-08!22;UBERON:0000015!6.75e-08!22;UBERON:0002423!6.75e-08!22;UBERON:0006235!6.75e-08!22;UBERON:0008835!6.75e-08!22;UBERON:0003894!6.75e-08!22;UBERON:0004161!6.75e-08!22;UBERON:0008836!6.75e-08!22;UBERON:0000490!8.69e-08!66;UBERON:0009569!2.87e-07!66;UBERON:0000344!3.95e-07!15;UBERON:0002204!5.17e-07!32;UBERON:0003104!5.31e-07!131;UBERON:0009142!5.31e-07!131;UBERON:0004923!7.20e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.62e-10,116;UBERON:0001555,6.62e-10,116;UBERON:0007026,6.62e-10,116;UBERON:0003104,1.53e-09,61;UBERON:0009142,1.53e-09,61;UBERON:0004119,1.55e-09,118;UBERON:0000925,1.55e-09,118;UBERON:0006595,1.55e-09,118;UBERON:0004921,3.05e-09,114;UBERON:0005172,5.52e-09,49;UBERON:0005173,5.52e-09,49;UBERON:0002417,5.52e-09,49;UBERON:0000916,5.52e-09,49;UBERON:0009854,5.83e-08,23;UBERON:0009856,5.83e-08,23;UBERON:0002107,6.75e-08,22;UBERON:0007499,6.75e-08,22;UBERON:0006925,6.75e-08,22;UBERON:0009497,6.75e-08,22;UBERON:0000015,6.75e-08,22;UBERON:0002423,6.75e-08,22;UBERON:0006235,6.75e-08,22;UBERON:0008835,6.75e-08,22;UBERON:0003894,6.75e-08,22;UBERON:0004161,6.75e-08,22;UBERON:0008836,6.75e-08,22;UBERON:0000490,8.74e-08,66;UBERON:0005409,2.33e-07,47;UBERON:0002100,2.76e-07,90;UBERON:0009569,2.87e-07,66;UBERON:0000344,3.95e-07,15;UBERON:0000160,4.76e-07,31;UBERON:0002204,5.17e-07,32;UBERON:0004923,7.20e-07,24;UBERON:0005256,8.95e-07,45 | |||
|phase1_expression=12.0111635328595,45.7157784007563,43.2249277420059,53.2337011900021,47.585094344903,25.853407874431,47.6569786814872,4.13194635013044,4.50523910885334,0.70219357896598,10.1018601253048,5.90313976565489,6.67682846731702,2.88487327982691,30.9792078488566,24.0945568193893,38.4759032970481,9.30613387806801,9.32378148519024,8.06340338416257,27.979242459702,8.43973085207525,9.14199261986274,35.0383405917561,41.5230798731578,41.9189333803965,60.3066794622705,56.6689341963888,64.9880094540799,75.6090389279792,119.512745243209,29.211410979143,20.9122027778754,0,21.9527231010969,21.7767385419625,17.9669033510885,401.371833876694,357.851587791901,314.637770128253,364.703522579229,385.237653516563,308.299074174783,15.485308610996,17.8423398946346,5.32285581268876,21.1245662973971,37.5003268974368,40.2025714404083,32.6642230444796,23.6577052546863,44.5632949531412,0.671130424230945,7.25362142011344,5.37750078627942,24.439646423415,23.2092086350393,21.1425557833751,7.28339259094552,5.28990979272033,3.80298842103708,13.2149367506962,24.9002542911119,54.8938827541653,56.3653826663175,66.0746506899873,47.3368174619079,51.4852529130883,8.19147937236973,8.6403800532282,9.04397333810943,14.8538511889978,16.7860091123226,7.59442955132715,7.57179221044067,4.5960939330501,18.7196997698961,14.1732945274558,11.366883460962,5.14356522147756,5.48925861614458,5.73004707612436,11.725685958058,14.069065250792,13.4462458043593,9.72274332063103,10.5355043791336,7.64237727883732,25.1410961866171,28.7927644006853,14.2033599463822,51.6254326188832,106.755499392117,72.3202276794675,40.9359142992032,45.6987424839282,44.0995479213701,17.5543232255399,17.6654483129951,15.546941278455,16.0561498545416,21.815501160434,15.2883143823987,21.3320010945999,62.3494198112297,61.0597275794988,62.1795067368183,44.6458969701524,13.2058320660058,12.3206975423805,12.3174582003956,17.0500667854799,20.5247792557892,20.0461111934988,16.2272415847273,21.9916534826932,35.3488803860155,13.5923395504717,74.3072863637894,17.9561203441624,27.6051898075492,25.2135131630315,20.5030937339934,9.66176630138106,5.44561437714983,47.2595552135894,30.9123021225274,35.394261128611,43.9662985672804,6.14141621559773,9.60751265919116,10.9319286338192,7.12679712788333,8.18289463457058,9.55825004973976,5.353961681236,15.4795833052481,36.4512423887573,10.108910337347,9.25944165900485,5.98554037628437,11.0353010128067,7.02242306240862,8.28876498096433,10.6136938676071,9.09607414022434,8.4331552103756,7.50239775143145,9.26942369611222,5.48407632486676,6.68614271823006,7.67185063496512,5.56094498451196,8.358051996532,7.40815691068596,8.16040493955822,60.3903341089382,89.0423758616914,109.402947267303,8.28503090142008,9.14651633926275,11.1638478105829,8.75955521665278,10.6252685143598,10.3358965634543,12.556833016522,11.8040296615832,9.69152341647507,10.5318303944627,8.04420573987567,8.18794976413143,9.9415991449226,8.78200461164202,12.7496097822353,5.46753866266731,9.57012895127345,31.059365600477,72.9883563991382,5.75878276445132,6.96710015581316,14.3042882067524,24.8070735286711,22.9049385160216,31.0067770563471,24.6755112003146,23.0578536613615,17.8447998248191,20.0946036761562,14.0374142725766,35.0539569375146,23.342909386467,21.706398784726,14.035424670528,14.2810640762161,16.9061603509621,20.1614814566861,23.4682509472827,45.3077396491458,31.8712147106257,43.8402139499418,46.0006272575228,52.6905889946088,40.0211046567651,19.6877224744991,23.7836384086976,28.7823503852613,25.5603752949514,32.0765622470714,30.0458505102075,25.892652370573,35.8318851172828,22.2394744682346,40.2550978276593,23.0727387554472,19.0342980599882,33.845569644913,41.6201999370836,37.1481511449793,18.4753190166605,10.6115190591471,7.82231886921724,8.65699937453459,9.38760993154008,14.2380318825543,12.1402256851867,18.5376965464909,12.6108115284953,9.30151696524855,9.8861956567642,15.4031515832794,15.1962784041988,14.4649058581512,27.142431109069,49.4954172275026,9.83528546038072,5.51873492609465,7.70642831941401,6.56385444916338,14.0984053023941,21.2075578851673,18.9304931649754,16.7888660047555,12.0637102730367,20.0733790280144,23.171062104569,15.0030561318081,18.2164815753702,17.2430956167674,14.2303600060748,3.85585579706168,16.1811697137426,15.8478387263857,15.6371480979433,12.5377293459127,11.9470624505967,9.22566417388929,16.9301191900261,16.9744571780308,20.0805287158925,15.3717573971964,17.8315522286073,11.9966130727577,17.1118741624666,11.6933600436252,9.48767477174989,19.5957532171555,6.80879211507576,9.36317688962813,8.27895576209629,7.71613326113732,7.44828981297549,8.38333442729732,7.0756078858912,7.30715877875038,15.7230044402686,8.26145076368899,10.8058915046931,5.27636009412736,9.20347232166662,10.2531972377865,9.31104283224465,12.3105674808796,22.1525435838687,9.45669040253599,27.85195357005,19.1939787205797,28.3347626875659,23.5460571255864,14.6262823661497,16.9295848172827,18.1876920093425,20.5728634915777,20.5917960968591,37.2321541025894,7.59206384594725,11.3858901591035,14.5807210109432,12.7543860568826,20.5260809921407,16.7231789517178,18.0184533481232,25.6520823144349,22.2937754061884,12.4267862617385,8.45539408026285,10.4661582230785,9.76205093696876,17.3061557626202,12.6576627008176,11.9958849098453,15.8432272171768,16.1453437206498,23.1739151180821,7.73069186643219,8.64090018773596,17.696622755178,13.1771389938607,23.4180982335806,32.9998890363599,23.4524971324401,22.6496744450642,20.5534218679147,19.3473280598696,16.7604306913925,21.261699056745,13.3090564380629,13.1568138998666,15.8749538706544,14.8433665770593,9.9761368790693,7.32553646134413,3.76798197759798,5.03653849092235,13.9096507703177,18.9559300205694,34.0662021137113,10.2896821957952,6.01886524842436,11.2950368523413,10.1271552031579,8.59343270159095,9.10821866421544,7.53590771747707,6.0431511791176,7.42524750254986,4.05289082901798,8.15656336171568,9.31968561153276,8.61434984948666,5.98537310101547,10.5854835567563,15.8019366094391,16.5594398476106,17.0974462858513,12.4458167568905,14.4224540067226,12.5158491740808,14.6564382823003,14.1948407938534,13.3924702384114,11.5179054187955,13.5733323098323,11.7168356669451,13.3362233559261,16.1079213063349,15.6256468575601,12.7746629249025,14.5726930933053,10.6289468239479,11.8908790126756,11.4449371174714,14.8253344964975,11.669563171501,13.0306496153182,12.4391021553485,11.0489278803894,13.3088031568945,14.0285567914435,15.7784574105152,11.8205378850676,9.82154503607254,11.7751999301334,15.4325288784913,8.74337022782811,15.6734177658424,13.5368764050428,16.8333732220582,19.8532277207564,15.5351449865682 | |||
|short_description=p2@Gsr | |||
}} |
Revision as of 15:30, 14 September 2013
Short description: | p2@Gsr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gsr_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -41bp_to_ENSMUST00000163254_5end |
EntrezGene: | Gsr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.91e-08 | 25 |
endodermal cell | 1.40e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.