FFCP PHASE1:Mm9::chr8:22832496..22832497,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=478|UniProt=|association_with_transcript=-44bp_to_ENSMUST00000121649_5end|description=CAGE_peak_1_at_ENSMUST00000121649_5end|id=chr8:22832496..22832497,+|ontology_enrichment_celltype=CL:0000239!6.55e-15!6;CL:0000677!6.55e-15!6;CL:0000212!6.55e-15!6;CL:0000584!6.55e-15!6;CL:0000075!8.10e-13!7;CL:0002563!5.09e-10!9;CL:0002251!5.09e-10!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.04e-23!15;UBERON:0000160!3.98e-17!43;UBERON:0001242!6.60e-15!13;UBERON:0000060!6.60e-15!13;UBERON:0001262!6.60e-15!13;UBERON:0004786!6.60e-15!13;UBERON:0004923!5.79e-14!24;UBERON:0001962!2.30e-12!2;UBERON:0001961!2.30e-12!2;UBERON:0001744!2.30e-12!2;UBERON:0005409!4.69e-12!59;UBERON:0003350!5.09e-10!9;UBERON:0004808!5.09e-10!9;UBERON:0001277!5.09e-10!9;UBERON:0002465!1.55e-08!3;UBERON:0000331!2.58e-08!3;UBERON:0002116!2.58e-08!3;UBERON:0001204!2.58e-08!3;UBERON:0001168!2.58e-08!3;UBERON:0000485!3.12e-08!11;UBERON:0003199!4.68e-07!1;UBERON:0001007!9.56e-07!128;UBERON:0001555!9.56e-07!128;UBERON:0007026!9.56e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.13e-20,2;UBERON:0001961,3.13e-20,2;UBERON:0001744,3.13e-20,2;UBERON:0000160,2.58e-15,31;UBERON:0002465,7.72e-14,3;UBERON:0003199,4.58e-11,1;UBERON:0000344,7.18e-11,15;UBERON:0002108,1.26e-10,4;UBERON:0005409,4.74e-10,47;UBERON:0004923,6.50e-07,24|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.16787927191189,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.98232065387321,0,0,0,5.51067916423484,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11560453330835,0,0,0,0,0,0,0,0,0,0,0,0,3.02593269824572,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000121649}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=478 | |||
|UniProt= | |||
|association_with_transcript=-44bp_to_ENSMUST00000121649_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000121649_5end | |||
|id=chr8:22832496..22832497,+ | |||
|ontology_enrichment_celltype=CL:0000239!6.55e-15!6;CL:0000677!6.55e-15!6;CL:0000212!6.55e-15!6;CL:0000584!6.55e-15!6;CL:0000075!8.10e-13!7;CL:0002563!5.09e-10!9;CL:0002251!5.09e-10!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.04e-23!15;UBERON:0000160!3.98e-17!43;UBERON:0001242!6.60e-15!13;UBERON:0000060!6.60e-15!13;UBERON:0001262!6.60e-15!13;UBERON:0004786!6.60e-15!13;UBERON:0004923!5.79e-14!24;UBERON:0001962!2.30e-12!2;UBERON:0001961!2.30e-12!2;UBERON:0001744!2.30e-12!2;UBERON:0005409!4.69e-12!59;UBERON:0003350!5.09e-10!9;UBERON:0004808!5.09e-10!9;UBERON:0001277!5.09e-10!9;UBERON:0002465!1.55e-08!3;UBERON:0000331!2.58e-08!3;UBERON:0002116!2.58e-08!3;UBERON:0001204!2.58e-08!3;UBERON:0001168!2.58e-08!3;UBERON:0000485!3.12e-08!11;UBERON:0003199!4.68e-07!1;UBERON:0001007!9.56e-07!128;UBERON:0001555!9.56e-07!128;UBERON:0007026!9.56e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.13e-20,2;UBERON:0001961,3.13e-20,2;UBERON:0001744,3.13e-20,2;UBERON:0000160,2.58e-15,31;UBERON:0002465,7.72e-14,3;UBERON:0003199,4.58e-11,1;UBERON:0000344,7.18e-11,15;UBERON:0002108,1.26e-10,4;UBERON:0005409,4.74e-10,47;UBERON:0004923,6.50e-07,24 | |||
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.16787927191189,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.98232065387321,0,0,0,5.51067916423484,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11560453330835,0,0,0,0,0,0,0,0,0,0,0,0,3.02593269824572,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000121649 | |||
}} |
Revision as of 15:20, 14 September 2013
Short description: | p1@ENSMUST00000121649 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000121649_5end |
Coexpression cluster: | MCL_coexpression_mm9:478 |
Association with transcript: | -44bp_to_ENSMUST00000121649_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 3.13e-20 | 2 |
mucosa-associated lymphoid tissue | 3.13e-20 | 2 |
lymphoid tissue | 3.13e-20 | 2 |
intestine | 2.58e-15 | 31 |
lymphoid system | 7.72e-14 | 3 |
egg chamber | 4.58e-11 | 1 |
mucosa | 7.18e-11 | 15 |
small intestine | 1.26e-10 | 4 |
gastrointestinal system | 4.74e-10 | 47 |
organ component layer | 6.50e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.