FFCP PHASE1:Mm9::chr8:107694596..107694619,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12400|HGNC=|UniProt=Q08024|association_with_transcript=22bp_to_ENSMUST00000052209,ENSMUST00000109392,ENSMUST00000109394,ENSMUST00000109395,NM_001161456,NM_001161457,NM_001161458,NM_022309,uc009nbp.2,uc009nbq.2,uc009nbr.2,uc012gjd.1_5end|description=CAGE_peak_4_at_Cbfb_5end|id=chr8:107694596..107694619,+|ontology_enrichment_celltype=CL:0000542!3.72e-07!13;CL:0000051!3.72e-07!13;CL:0000738!4.47e-07!17;CL:0002087!4.47e-07!17;CL:0000838!8.90e-07!12|ontology_enrichment_celltype_v019_2=CL:0000542,3.15e-07,13;CL:0000051,3.15e-07,13;CL:0000738,3.78e-07,17;CL:0002087,3.78e-07,17;CL:0000838,7.61e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!3.85e-12!24;UBERON:0001557!3.85e-12!24;UBERON:0001042!3.85e-12!24;UBERON:0008814!3.85e-12!24;UBERON:0009145!3.85e-12!24;UBERON:0002370!4.23e-12!23;UBERON:0000974!4.23e-12!23;UBERON:0004807!4.23e-12!23;UBERON:0005058!4.23e-12!23;UBERON:0003351!4.23e-12!23;UBERON:0009113!4.23e-12!23;UBERON:0003295!4.23e-12!23;UBERON:0009722!4.23e-12!23;UBERON:0005562!4.23e-12!23;UBERON:0007690!4.23e-12!23;UBERON:0003408!4.68e-12!24;UBERON:0000072!1.45e-10!27;UBERON:0001004!2.42e-10!42;UBERON:0000065!2.88e-10!41;UBERON:0004177!6.19e-10!29;UBERON:0002193!7.80e-10!48;UBERON:0002390!1.36e-09!45;UBERON:0003061!1.36e-09!45|ontology_enrichment_uberon_v019_2=UBERON:0006562,2.81e-12,24;UBERON:0001557,2.81e-12,24;UBERON:0001042,2.81e-12,24;UBERON:0008814,2.81e-12,24;UBERON:0009145,2.81e-12,24;UBERON:0002370,3.08e-12,23;UBERON:0000974,3.08e-12,23;UBERON:0004807,3.08e-12,23;UBERON:0005058,3.08e-12,23;UBERON:0003351,3.08e-12,23;UBERON:0009113,3.08e-12,23;UBERON:0003295,3.08e-12,23;UBERON:0009722,3.08e-12,23;UBERON:0005562,3.08e-12,23;UBERON:0007690,3.08e-12,23;UBERON:0003408,3.42e-12,24;UBERON:0000072,1.11e-10,27;UBERON:0001004,1.65e-10,42;UBERON:0000065,1.97e-10,41;UBERON:0004177,4.82e-10,29;UBERON:0005057,4.82e-10,29;UBERON:0002193,7.20e-10,48;UBERON:0002405,7.20e-10,48;UBERON:0002390,1.27e-09,45;UBERON:0003061,1.27e-09,45;UBERON:0000153,4.16e-09,43;UBERON:0000926,8.31e-09,120;UBERON:0004120,8.31e-09,120;UBERON:0006603,8.31e-09,120;UBERON:0000077,2.62e-08,35;UBERON:0007811,8.53e-08,36|phase1_expression=1.12104192973356,1.74487703819681,3.18499467572675,0.60492842261366,3.00537437967808,6.04365378882803,2.80335168714631,4.77756296733832,5.490760163915,4.44722600011788,2.73948749160808,3.74929147278081,6.16322627752341,4.10875891369288,0.666219523631325,1.01237633694913,0,3.78554598429885,5.21034847701807,2.97072756258621,0.255129870453209,3.3758923408301,3.39559725880616,1.91990907352088,2.52350209173887,4.59385571292016,6.03066794622705,3.23206849028834,0.950117097281869,3.02436155711917,1.77384408524244,0.635030673459631,0,15.8481681015439,1.44425809875637,0.664938581433969,1.42918549383658,7.53356935326434,7.0320181007142,7.32933241563318,6.47054636834116,6.14740936462601,8.73918635456076,0.629484089877886,0.405507724878058,1.10128051297009,0,2.18025156380447,1.5378032791413,1.94429899074283,1.81982348112971,0,7.71799987865587,14.5072428402269,9.74672017513146,2.05807548828758,3.43840127926508,1.54701627683233,0.606949382578793,0.528990979272033,0,1.0165335962074,0.889294796111139,5.84934816232909,0.988866362566974,2.8419204597844,2.99600110518405,1.92109152660777,1.76272340924412,1.4850653216486,1.68259969081106,2.28520787523043,1.10434270475807,0.979926393719632,1.34183659425531,0,0,0.383062014255563,0.307213066512487,0.659431438650969,0.640413505216868,1.04182674111352,0.558365998002762,1.68828783009504,0.45839474333043,0.294628585473668,1.70846016958924,0.931997229126503,4.99792875999015,7.78387069099891,1.44932244350839,2.58127163094416,0,1.07940638327563,1.29955283489534,0,0.702222100658759,2.38602451609281,2.07828803682295,3.5333957451034,2.11265129665021,7.69958864485907,5.09610479413291,7.11066703153331,2.16491041011214,1.52015919285059,1.01104889002957,1.82694207550496,3.10725460376606,4.60170631100957,3.64319186208885,1.21786191324856,1.38369298353635,3.61734337326294,1.76383060703557,2.51333182659351,2.47194967734374,0.144599356919912,4.42305275974937,2.75003644910596,2.87093973998512,2.90925151881133,0,0.292780797011547,0.209446706813455,1.78819938646014,1.31796636956512,4.19931911695385,1.39777249780371,0.149790639404823,0,0.879580464790051,0.347648640384553,0.255715457330331,0.41557608911912,0.486723789203273,1.93494791315601,2.98576729464223,1.0108910337347,2.31486041475121,1.43132487258974,3.21862946206862,1.80062129805349,1.05493372485001,1.29269348387523,1.5373646434182,1.03071897015702,0.776110112217047,2.37124792226126,5.48407632486676,4.22282697993477,2.41115305670332,2.78047249225598,3.48252166522167,1.85203922767149,2.18937693500343,2.1066395619397,3.86021860672073,3.40996199274711,3.52113813310353,3.51789089971644,2.70093092191522,2.84093682702252,1.37734962223183,1.23413690309903,2.09280550275367,1.3413670069981,1.75148013550754,1.31647879930784,0.820837320395476,1.29710095273369,1.16959989940266,1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| ||
|EntrezGene=12400 | |||
|HGNC= | |||
|UniProt=Q08024 | |||
|association_with_transcript=22bp_to_ENSMUST00000052209,ENSMUST00000109392,ENSMUST00000109394,ENSMUST00000109395,NM_001161456,NM_001161457,NM_001161458,NM_022309,uc009nbp.2,uc009nbq.2,uc009nbr.2,uc012gjd.1_5end | |||
|description=CAGE_peak_4_at_Cbfb_5end | |||
|id=chr8:107694596..107694619,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.72e-07!13;CL:0000051!3.72e-07!13;CL:0000738!4.47e-07!17;CL:0002087!4.47e-07!17;CL:0000838!8.90e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.15e-07,13;CL:0000051,3.15e-07,13;CL:0000738,3.78e-07,17;CL:0002087,3.78e-07,17;CL:0000838,7.61e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!3.85e-12!24;UBERON:0001557!3.85e-12!24;UBERON:0001042!3.85e-12!24;UBERON:0008814!3.85e-12!24;UBERON:0009145!3.85e-12!24;UBERON:0002370!4.23e-12!23;UBERON:0000974!4.23e-12!23;UBERON:0004807!4.23e-12!23;UBERON:0005058!4.23e-12!23;UBERON:0003351!4.23e-12!23;UBERON:0009113!4.23e-12!23;UBERON:0003295!4.23e-12!23;UBERON:0009722!4.23e-12!23;UBERON:0005562!4.23e-12!23;UBERON:0007690!4.23e-12!23;UBERON:0003408!4.68e-12!24;UBERON:0000072!1.45e-10!27;UBERON:0001004!2.42e-10!42;UBERON:0000065!2.88e-10!41;UBERON:0004177!6.19e-10!29;UBERON:0002193!7.80e-10!48;UBERON:0002390!1.36e-09!45;UBERON:0003061!1.36e-09!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,2.81e-12,24;UBERON:0001557,2.81e-12,24;UBERON:0001042,2.81e-12,24;UBERON:0008814,2.81e-12,24;UBERON:0009145,2.81e-12,24;UBERON:0002370,3.08e-12,23;UBERON:0000974,3.08e-12,23;UBERON:0004807,3.08e-12,23;UBERON:0005058,3.08e-12,23;UBERON:0003351,3.08e-12,23;UBERON:0009113,3.08e-12,23;UBERON:0003295,3.08e-12,23;UBERON:0009722,3.08e-12,23;UBERON:0005562,3.08e-12,23;UBERON:0007690,3.08e-12,23;UBERON:0003408,3.42e-12,24;UBERON:0000072,1.11e-10,27;UBERON:0001004,1.65e-10,42;UBERON:0000065,1.97e-10,41;UBERON:0004177,4.82e-10,29;UBERON:0005057,4.82e-10,29;UBERON:0002193,7.20e-10,48;UBERON:0002405,7.20e-10,48;UBERON:0002390,1.27e-09,45;UBERON:0003061,1.27e-09,45;UBERON:0000153,4.16e-09,43;UBERON:0000926,8.31e-09,120;UBERON:0004120,8.31e-09,120;UBERON:0006603,8.31e-09,120;UBERON:0000077,2.62e-08,35;UBERON:0007811,8.53e-08,36 | |||
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| |||
|short_description=p4@Cbfb | |||
}} |
Revision as of 14:34, 14 September 2013
Short description: | p4@Cbfb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cbfb_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENSMUST00000052209, ENSMUST00000109392, ENSMUST00000109394, ENSMUST00000109395, NM_001161456, NM_001161457, NM_001161458, NM_022309, uc009nbp.2, uc009nbq.2, uc009nbr.2, uc012gjd.1_5end |
EntrezGene: | Cbfb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.15e-07 | 13 |
common lymphoid progenitor | 3.15e-07 | 13 |
leukocyte | 3.78e-07 | 17 |
nongranular leukocyte | 3.78e-07 | 17 |
lymphoid lineage restricted progenitor cell | 7.61e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
pharynx | 2.81e-12 | 24 |
upper respiratory tract | 2.81e-12 | 24 |
chordate pharynx | 2.81e-12 | 24 |
pharyngeal arch system | 2.81e-12 | 24 |
pharyngeal region of foregut | 2.81e-12 | 24 |
thymus | 3.08e-12 | 23 |
neck | 3.08e-12 | 23 |
respiratory system epithelium | 3.08e-12 | 23 |
hemolymphoid system gland | 3.08e-12 | 23 |
pharyngeal epithelium | 3.08e-12 | 23 |
thymic region | 3.08e-12 | 23 |
pharyngeal gland | 3.08e-12 | 23 |
entire pharyngeal arch endoderm | 3.08e-12 | 23 |
thymus primordium | 3.08e-12 | 23 |
early pharyngeal endoderm | 3.08e-12 | 23 |
gland of gut | 3.42e-12 | 24 |
segment of respiratory tract | 1.11e-10 | 27 |
respiratory system | 1.65e-10 | 42 |
respiratory tract | 1.97e-10 | 41 |
hemopoietic organ | 4.82e-10 | 29 |
immune organ | 4.82e-10 | 29 |
hemolymphoid system | 7.20e-10 | 48 |
immune system | 7.20e-10 | 48 |
hematopoietic system | 1.27e-09 | 45 |
blood island | 1.27e-09 | 45 |
anterior region of body | 4.16e-09 | 43 |
mesoderm | 8.31e-09 | 120 |
mesoderm-derived structure | 8.31e-09 | 120 |
presumptive mesoderm | 8.31e-09 | 120 |
mixed endoderm/mesoderm-derived structure | 2.62e-08 | 35 |
craniocervical region | 8.53e-08 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.