FFCP PHASE1:Mm9::chr7:71646925..71646934,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11784|HGNC=|MCL_coexpression_id=1|UniProt=E9Q0G5|association_with_transcript=-89bp_to_ENSMUST00000137732_5end|description=CAGE_peak_8_at_Apba2_5end|id=chr7:71646925..71646934,+|ontology_enrichment_celltype=CL:0000117!3.78e-16!23;CL:0000337!3.78e-16!23;CL:0000540!1.98e-15!33;CL:0000047!1.98e-15!33;CL:0000031!1.98e-15!33;CL:0000404!1.98e-15!33;CL:0002319!6.23e-14!43;CL:0000221!2.36e-13!44;CL:0000133!2.36e-13!44;CL:0000393!1.70e-11!39;CL:0000211!1.70e-11!39;CL:0000055!2.02e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.32e-19,23;CL:0000337,6.32e-19,23;CL:0000540,3.45e-12,33;CL:0000047,3.45e-12,33;CL:0000031,3.45e-12,33;CL:0000404,3.45e-12,33;CL:0000393,8.11e-10,39;CL:0000211,8.11e-10,39;CL:0002319,1.31e-08,43;CL:0000221,2.42e-08,44;CL:0000133,2.42e-08,44;CL:0002610,5.84e-08,3;CL:0002614,3.94e-07,3;CL:0000120,4.37e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.72e-32!75;UBERON:0001016!7.72e-32!75;UBERON:0001017!5.96e-31!73;UBERON:0005743!5.96e-31!73;UBERON:0004121!3.69e-29!102;UBERON:0000924!3.69e-29!102;UBERON:0006601!3.69e-29!102;UBERON:0002346!7.91e-29!71;UBERON:0003075!7.91e-29!71;UBERON:0007284!7.91e-29!71;UBERON:0000033!3.00e-24!63;UBERON:0001049!6.22e-24!52;UBERON:0005068!6.22e-24!52;UBERON:0006241!6.22e-24!52;UBERON:0007135!6.22e-24!52;UBERON:0002020!2.70e-23!34;UBERON:0000955!2.85e-22!50;UBERON:0006238!2.85e-22!50;UBERON:0003056!6.44e-22!49;UBERON:0002616!1.34e-21!49;UBERON:0002791!4.63e-19!29;UBERON:0003528!4.63e-19!29;UBERON:0001893!4.63e-19!29;UBERON:0003080!2.79e-17!40;UBERON:0002780!1.70e-16!39;UBERON:0001890!1.70e-16!39;UBERON:0006240!1.70e-16!39;UBERON:0007811!3.06e-16!86;UBERON:0000153!1.13e-14!94;UBERON:0000956!8.65e-13!21;UBERON:0001869!8.65e-13!21;UBERON:0000203!8.65e-13!21;UBERON:0002021!6.79e-11!10;UBERON:0000411!6.79e-11!10;UBERON:0001950!6.79e-11!10;UBERON:0002619!2.51e-10!17;UBERON:0002420!1.43e-07!8;UBERON:0007245!1.43e-07!8;UBERON:0010009!1.43e-07!8;UBERON:0010011!1.43e-07!8;UBERON:0000454!1.43e-07!8;UBERON:0003076!2.73e-07!12;UBERON:0003057!2.73e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.39e-43,54;UBERON:0001049,6.19e-39,52;UBERON:0005068,6.19e-39,52;UBERON:0006241,6.19e-39,52;UBERON:0007135,6.19e-39,52;UBERON:0001017,7.72e-39,73;UBERON:0001016,1.30e-37,75;UBERON:0002020,6.99e-34,34;UBERON:0002616,1.52e-30,46;UBERON:0002346,2.26e-30,64;UBERON:0003075,2.26e-30,64;UBERON:0007284,2.26e-30,64;UBERON:0000955,9.13e-30,47;UBERON:0006238,9.13e-30,47;UBERON:0004121,3.45e-28,95;UBERON:0000924,3.45e-28,95;UBERON:0006601,3.45e-28,95;UBERON:0003528,2.88e-27,29;UBERON:0002791,2.88e-27,29;UBERON:0001893,2.88e-27,29;UBERON:0010371,8.55e-26,73;UBERON:0003080,3.46e-25,40;UBERON:0002780,1.61e-23,39;UBERON:0001890,1.61e-23,39;UBERON:0006240,1.61e-23,39;UBERON:0002021,1.00e-20,10;UBERON:0000411,1.00e-20,10;UBERON:0001950,1.00e-20,10;UBERON:0003056,1.37e-19,49;UBERON:0010314,4.59e-19,92;UBERON:0002619,3.12e-17,17;UBERON:0000956,4.10e-16,21;UBERON:0001869,4.10e-16,21;UBERON:0000203,4.10e-16,21;UBERON:0003076,3.57e-14,12;UBERON:0003057,3.57e-14,12;UBERON:0000025,4.55e-14,114;UBERON:0002420,7.34e-13,8;UBERON:0007245,7.34e-13,8;UBERON:0010009,7.34e-13,8;UBERON:0010011,7.34e-13,8;UBERON:0000454,7.34e-13,8;UBERON:0004111,1.07e-12,122;UBERON:0011216,4.90e-10,194;UBERON:0002240,1.35e-09,6;UBERON:0005174,1.35e-09,6;UBERON:0001137,1.35e-09,6;UBERON:0002950,4.50e-09,4;UBERON:0001891,4.50e-09,4;UBERON:0009616,4.50e-09,4;UBERON:0010286,4.50e-09,4;UBERON:0004684,5.84e-08,3;UBERON:0002275,5.84e-08,3;UBERON:0001948,9.82e-08,5;UBERON:0002315,9.82e-08,5;UBERON:0000369,1.90e-07,5;UBERON:0002435,1.90e-07,5;UBERON:0000204,1.90e-07,5;UBERON:0010082,1.90e-07,5;UBERON:0002038,3.94e-07,3;UBERON:0009663,3.94e-07,3;UBERON:0009661,3.94e-07,3;UBERON:0000125,3.94e-07,3;UBERON:0002308,3.94e-07,3;UBERON:0000483,7.33e-07,174|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.540023753326763,0.420649922702764,2.28520787523043,1.54607978666129,0.734944795289724,0.287536413054709,0,2.20231761998777,2.042997409363,2.15049146558741,0.791317726381163,1.18933936683133,1.04182674111352,1.11673199600552,1.12552522006336,1.98637722109853,1.47314292736834,1.70846016958924,0.931997229126503,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0.484875253135222,0,2.04946557908083,2.30391377494801,0,0,0,0,1.49790639404823,2.28750301409313,1.63350657746724,2.78118912307642,5.11430914660661,1.45451631191692,1.46017136760982,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.720248519221397,0.30140963567143,0.748401490664606,0.384341160854549,0.468508622798644,0.258703370739016,0,0,0.175951124163949,0.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| ||
|EntrezGene=11784 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=E9Q0G5 | |||
|association_with_transcript=-89bp_to_ENSMUST00000137732_5end | |||
|description=CAGE_peak_8_at_Apba2_5end | |||
|id=chr7:71646925..71646934,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.78e-16!23;CL:0000337!3.78e-16!23;CL:0000540!1.98e-15!33;CL:0000047!1.98e-15!33;CL:0000031!1.98e-15!33;CL:0000404!1.98e-15!33;CL:0002319!6.23e-14!43;CL:0000221!2.36e-13!44;CL:0000133!2.36e-13!44;CL:0000393!1.70e-11!39;CL:0000211!1.70e-11!39;CL:0000055!2.02e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.32e-19,23;CL:0000337,6.32e-19,23;CL:0000540,3.45e-12,33;CL:0000047,3.45e-12,33;CL:0000031,3.45e-12,33;CL:0000404,3.45e-12,33;CL:0000393,8.11e-10,39;CL:0000211,8.11e-10,39;CL:0002319,1.31e-08,43;CL:0000221,2.42e-08,44;CL:0000133,2.42e-08,44;CL:0002610,5.84e-08,3;CL:0002614,3.94e-07,3;CL:0000120,4.37e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.72e-32!75;UBERON:0001016!7.72e-32!75;UBERON:0001017!5.96e-31!73;UBERON:0005743!5.96e-31!73;UBERON:0004121!3.69e-29!102;UBERON:0000924!3.69e-29!102;UBERON:0006601!3.69e-29!102;UBERON:0002346!7.91e-29!71;UBERON:0003075!7.91e-29!71;UBERON:0007284!7.91e-29!71;UBERON:0000033!3.00e-24!63;UBERON:0001049!6.22e-24!52;UBERON:0005068!6.22e-24!52;UBERON:0006241!6.22e-24!52;UBERON:0007135!6.22e-24!52;UBERON:0002020!2.70e-23!34;UBERON:0000955!2.85e-22!50;UBERON:0006238!2.85e-22!50;UBERON:0003056!6.44e-22!49;UBERON:0002616!1.34e-21!49;UBERON:0002791!4.63e-19!29;UBERON:0003528!4.63e-19!29;UBERON:0001893!4.63e-19!29;UBERON:0003080!2.79e-17!40;UBERON:0002780!1.70e-16!39;UBERON:0001890!1.70e-16!39;UBERON:0006240!1.70e-16!39;UBERON:0007811!3.06e-16!86;UBERON:0000153!1.13e-14!94;UBERON:0000956!8.65e-13!21;UBERON:0001869!8.65e-13!21;UBERON:0000203!8.65e-13!21;UBERON:0002021!6.79e-11!10;UBERON:0000411!6.79e-11!10;UBERON:0001950!6.79e-11!10;UBERON:0002619!2.51e-10!17;UBERON:0002420!1.43e-07!8;UBERON:0007245!1.43e-07!8;UBERON:0010009!1.43e-07!8;UBERON:0010011!1.43e-07!8;UBERON:0000454!1.43e-07!8;UBERON:0003076!2.73e-07!12;UBERON:0003057!2.73e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.39e-43,54;UBERON:0001049,6.19e-39,52;UBERON:0005068,6.19e-39,52;UBERON:0006241,6.19e-39,52;UBERON:0007135,6.19e-39,52;UBERON:0001017,7.72e-39,73;UBERON:0001016,1.30e-37,75;UBERON:0002020,6.99e-34,34;UBERON:0002616,1.52e-30,46;UBERON:0002346,2.26e-30,64;UBERON:0003075,2.26e-30,64;UBERON:0007284,2.26e-30,64;UBERON:0000955,9.13e-30,47;UBERON:0006238,9.13e-30,47;UBERON:0004121,3.45e-28,95;UBERON:0000924,3.45e-28,95;UBERON:0006601,3.45e-28,95;UBERON:0003528,2.88e-27,29;UBERON:0002791,2.88e-27,29;UBERON:0001893,2.88e-27,29;UBERON:0010371,8.55e-26,73;UBERON:0003080,3.46e-25,40;UBERON:0002780,1.61e-23,39;UBERON:0001890,1.61e-23,39;UBERON:0006240,1.61e-23,39;UBERON:0002021,1.00e-20,10;UBERON:0000411,1.00e-20,10;UBERON:0001950,1.00e-20,10;UBERON:0003056,1.37e-19,49;UBERON:0010314,4.59e-19,92;UBERON:0002619,3.12e-17,17;UBERON:0000956,4.10e-16,21;UBERON:0001869,4.10e-16,21;UBERON:0000203,4.10e-16,21;UBERON:0003076,3.57e-14,12;UBERON:0003057,3.57e-14,12;UBERON:0000025,4.55e-14,114;UBERON:0002420,7.34e-13,8;UBERON:0007245,7.34e-13,8;UBERON:0010009,7.34e-13,8;UBERON:0010011,7.34e-13,8;UBERON:0000454,7.34e-13,8;UBERON:0004111,1.07e-12,122;UBERON:0011216,4.90e-10,194;UBERON:0002240,1.35e-09,6;UBERON:0005174,1.35e-09,6;UBERON:0001137,1.35e-09,6;UBERON:0002950,4.50e-09,4;UBERON:0001891,4.50e-09,4;UBERON:0009616,4.50e-09,4;UBERON:0010286,4.50e-09,4;UBERON:0004684,5.84e-08,3;UBERON:0002275,5.84e-08,3;UBERON:0001948,9.82e-08,5;UBERON:0002315,9.82e-08,5;UBERON:0000369,1.90e-07,5;UBERON:0002435,1.90e-07,5;UBERON:0000204,1.90e-07,5;UBERON:0010082,1.90e-07,5;UBERON:0002038,3.94e-07,3;UBERON:0009663,3.94e-07,3;UBERON:0009661,3.94e-07,3;UBERON:0000125,3.94e-07,3;UBERON:0002308,3.94e-07,3;UBERON:0000483,7.33e-07,174 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.540023753326763,0.420649922702764,2.28520787523043,1.54607978666129,0.734944795289724,0.287536413054709,0,2.20231761998777,2.042997409363,2.15049146558741,0.791317726381163,1.18933936683133,1.04182674111352,1.11673199600552,1.12552522006336,1.98637722109853,1.47314292736834,1.70846016958924,0.931997229126503,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0.484875253135222,0,2.04946557908083,2.30391377494801,0,0,0,0,1.49790639404823,2.28750301409313,1.63350657746724,2.78118912307642,5.11430914660661,1.45451631191692,1.46017136760982,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.720248519221397,0.30140963567143,0.748401490664606,0.384341160854549,0.468508622798644,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6263788684108,2.46971069710283,0,0,0.213288250535234,0,0.257734922644187,0.201683524623343,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.17211686592203,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,4.51801474093653,5.06357760157895,4.01026859407578,4.81188910562325,0.685082519770642,3.0215755895588,3.37511250115903,4.5032120322422,4.07828168085784,3.10656187051092,0.207574695168353,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.666740183404846,0,0.64183841918363,0,0.760437899670719,0.377252682772152,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.463537303779422,0.38581844092741,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.474540072496697,0.591026894253381,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p8@Apba2 | |||
}} |
Revision as of 14:04, 14 September 2013
Short description: | p8@Apba2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Apba2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -89bp_to_ENSMUST00000137732_5end |
EntrezGene: | Apba2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.32e-19 | 23 |
neuroblast (sensu Vertebrata) | 6.32e-19 | 23 |
neuron | 3.45e-12 | 33 |
neuronal stem cell | 3.45e-12 | 33 |
neuroblast | 3.45e-12 | 33 |
electrically signaling cell | 3.45e-12 | 33 |
electrically responsive cell | 8.11e-10 | 39 |
electrically active cell | 8.11e-10 | 39 |
neural cell | 1.31e-08 | 43 |
ectodermal cell | 2.42e-08 | 44 |
neurectodermal cell | 2.42e-08 | 44 |
raphe nuclei neuron | 5.84e-08 | 3 |
neuron of the substantia nigra | 3.94e-07 | 3 |
granule cell | 4.37e-07 | 3 |
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.