FFCP PHASE1:Mm9::chr7:57014470..57014533,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53415|HGNC=|UniProt=Q99KN6,Q3U816,Q9Z2G9|association_with_transcript=0bp_to_ENSMUST00000085272,NM_001146049,NM_001146050,NM_001146053,NM_016865,uc009hbo.2,uc009hbp.2,uc009hbq.2,uc012flc.1,uc012fld.1_5end|description=CAGE_peak_1_at_Htatip2_5end|id=chr7:57014470..57014533,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.16e-15!130;UBERON:0000925!5.16e-15!130;UBERON:0006595!5.16e-15!130;UBERON:0001007!4.92e-14!128;UBERON:0001555!4.92e-14!128;UBERON:0007026!4.92e-14!128;UBERON:0005256!3.28e-13!47;UBERON:0004921!5.93e-13!126;UBERON:0004185!5.93e-13!126;UBERON:0002405!8.71e-10!70;UBERON:0000490!1.37e-09!66;UBERON:0002365!2.65e-09!25;UBERON:0002330!2.65e-09!25;UBERON:0009854!2.74e-09!23;UBERON:0009856!2.74e-09!23;UBERON:0002107!5.42e-09!22;UBERON:0007499!5.42e-09!22;UBERON:0006925!5.42e-09!22;UBERON:0009497!5.42e-09!22;UBERON:0000015!5.42e-09!22;UBERON:0002423!5.42e-09!22;UBERON:0006235!5.42e-09!22;UBERON:0008835!5.42e-09!22;UBERON:0003894!5.42e-09!22;UBERON:0004161!5.42e-09!22;UBERON:0008836!5.42e-09!22;UBERON:0004923!1.09e-08!24;UBERON:0003104!4.63e-08!131;UBERON:0009142!4.63e-08!131;UBERON:0000926!9.14e-08!193;UBERON:0004120!9.14e-08!193;UBERON:0006603!9.14e-08!193;UBERON:0003929!1.35e-07!55;UBERON:0000077!2.08e-07!97;UBERON:0000344!4.09e-07!15;UBERON:0005409!4.96e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.46e-16,118;UBERON:0000925,9.46e-16,118;UBERON:0006595,9.46e-16,118;UBERON:0001007,9.61e-15,116;UBERON:0001555,9.61e-15,116;UBERON:0007026,9.61e-15,116;UBERON:0004921,1.26e-13,114;UBERON:0005256,1.80e-13,45;UBERON:0000490,1.27e-09,66;UBERON:0002365,2.63e-09,25;UBERON:0002330,2.63e-09,25;UBERON:0009854,2.71e-09,23;UBERON:0009856,2.71e-09,23;UBERON:0002107,5.38e-09,22;UBERON:0007499,5.38e-09,22;UBERON:0006925,5.38e-09,22;UBERON:0009497,5.38e-09,22;UBERON:0000015,5.38e-09,22;UBERON:0002423,5.38e-09,22;UBERON:0006235,5.38e-09,22;UBERON:0008835,5.38e-09,22;UBERON:0003894,5.38e-09,22;UBERON:0004161,5.38e-09,22;UBERON:0008836,5.38e-09,22;UBERON:0004923,1.08e-08,24;UBERON:0003104,2.59e-08,61;UBERON:0009142,2.59e-08,61;UBERON:0005409,3.59e-08,47;UBERON:0003929,1.26e-07,55;UBERON:0002100,2.77e-07,90;UBERON:0000344,4.07e-07,15;UBERON:0000160,9.97e-07,31|phase1_expression=6.72625157840135,20.2405736430829,32.3049459966571,46.8819527525587,45.0806156951712,13.2624624810393,23.3612640595526,8.65126267058561,1.54867594366833,2.10658073689794,4.45166717386313,3.19088635981346,12.1552518251156,11.0149707047937,14.3237197580735,23.8920815519995,57.364074006508,7.09789872056035,7.40417941470989,9.33657233955666,13.0116233931137,1.09220046320974,0,50.7175980255099,49.0935861483744,32.1569899904411,38.3378176581577,26.0720191549926,33.4441218243218,28.4794046628722,29.4901579171555,4.44521471421742,3.69038872550742,0,10.6875099307972,11.6364251750945,7.9626048942324,27.6230876286359,22.6587249911902,28.2702821745851,23.5292595212406,28.6879103682547,27.1885797697446,7.80560271448579,7.60326984146359,8.81024410376071,25.0365230191373,12.8634842264463,19.1126978978991,18.8597002102055,31.0769856008305,11.5002051491977,6.37573903019398,10.8804321301702,9.74672017513146,17.4936416504444,31.2321449533245,26.2992767061496,0.606949382578793,0,0.633831403506179,8.80995783379743,23.1216646988896,33.2962895394118,33.6214563272771,38.3659262070894,11.085204089181,7.30014780110954,0.103689612308478,0,0,0.571301968807607,2.20868540951614,0.122490799214954,0.287536413054709,1.83843757322004,7.70811166995721,4.72443150915195,4.45458946443106,0.659431438650969,0.731901148819277,1.04182674111352,6.42120897703176,9.56696437053856,7.63991238884051,0.883885756421003,1.56608848879013,1.1183966749518,1.8931548333296,6.95258352982427,4.63783181922684,25.8127163094416,27.8788246820178,46.9541776724901,56.5305483179472,42.1145273871495,18.5386634573912,0,0,0,9.01397886570755,5.13305909657271,2.54805239706646,0,25.9789249213457,28.6296647986861,28.3093689208279,16.5566625592637,6.99132285847364,25.8289321972795,8.67426633830679,18.5723941770406,27.2126286762149,38.4342733409188,24.3408623770909,22.9969862133306,23.2363269670311,10.1219549843938,14.153768831198,5.82360659810673,9.49618529379692,13.091631834651,20.5030937339934,1.17112318804619,1.25668024088073,23.757506134399,2.75574786363617,14.9975682748352,3.93917703926501,4.6435098215495,1.83000241127451,0.502617408451458,7.30062144807561,7.67146371990992,4.57133698031032,5.67844420737152,3.86989582631202,10.8234064430781,4.0435641349388,25.8843482740363,1.56144531555244,1.60931473103431,0.900310649026746,2.10986744970001,0.884474488967262,0.640568601424249,0.562210347358373,5.43277078551933,1.5089759505299,0.378212160335639,0.879755620819744,3.28793598641362,2.22437799380478,5.92028683087683,7.40815691068596,1.59227413454795,9.12877143507205,9.00717674901503,7.10408748488982,4.55676699578104,3.04883877975425,4.14142741360334,3.55117103377815,4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| ||
|EntrezGene=53415 | |||
|HGNC= | |||
|UniProt=Q99KN6,Q3U816,Q9Z2G9 | |||
|association_with_transcript=0bp_to_ENSMUST00000085272,NM_001146049,NM_001146050,NM_001146053,NM_016865,uc009hbo.2,uc009hbp.2,uc009hbq.2,uc012flc.1,uc012fld.1_5end | |||
|description=CAGE_peak_1_at_Htatip2_5end | |||
|id=chr7:57014470..57014533,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.16e-15!130;UBERON:0000925!5.16e-15!130;UBERON:0006595!5.16e-15!130;UBERON:0001007!4.92e-14!128;UBERON:0001555!4.92e-14!128;UBERON:0007026!4.92e-14!128;UBERON:0005256!3.28e-13!47;UBERON:0004921!5.93e-13!126;UBERON:0004185!5.93e-13!126;UBERON:0002405!8.71e-10!70;UBERON:0000490!1.37e-09!66;UBERON:0002365!2.65e-09!25;UBERON:0002330!2.65e-09!25;UBERON:0009854!2.74e-09!23;UBERON:0009856!2.74e-09!23;UBERON:0002107!5.42e-09!22;UBERON:0007499!5.42e-09!22;UBERON:0006925!5.42e-09!22;UBERON:0009497!5.42e-09!22;UBERON:0000015!5.42e-09!22;UBERON:0002423!5.42e-09!22;UBERON:0006235!5.42e-09!22;UBERON:0008835!5.42e-09!22;UBERON:0003894!5.42e-09!22;UBERON:0004161!5.42e-09!22;UBERON:0008836!5.42e-09!22;UBERON:0004923!1.09e-08!24;UBERON:0003104!4.63e-08!131;UBERON:0009142!4.63e-08!131;UBERON:0000926!9.14e-08!193;UBERON:0004120!9.14e-08!193;UBERON:0006603!9.14e-08!193;UBERON:0003929!1.35e-07!55;UBERON:0000077!2.08e-07!97;UBERON:0000344!4.09e-07!15;UBERON:0005409!4.96e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.46e-16,118;UBERON:0000925,9.46e-16,118;UBERON:0006595,9.46e-16,118;UBERON:0001007,9.61e-15,116;UBERON:0001555,9.61e-15,116;UBERON:0007026,9.61e-15,116;UBERON:0004921,1.26e-13,114;UBERON:0005256,1.80e-13,45;UBERON:0000490,1.27e-09,66;UBERON:0002365,2.63e-09,25;UBERON:0002330,2.63e-09,25;UBERON:0009854,2.71e-09,23;UBERON:0009856,2.71e-09,23;UBERON:0002107,5.38e-09,22;UBERON:0007499,5.38e-09,22;UBERON:0006925,5.38e-09,22;UBERON:0009497,5.38e-09,22;UBERON:0000015,5.38e-09,22;UBERON:0002423,5.38e-09,22;UBERON:0006235,5.38e-09,22;UBERON:0008835,5.38e-09,22;UBERON:0003894,5.38e-09,22;UBERON:0004161,5.38e-09,22;UBERON:0008836,5.38e-09,22;UBERON:0004923,1.08e-08,24;UBERON:0003104,2.59e-08,61;UBERON:0009142,2.59e-08,61;UBERON:0005409,3.59e-08,47;UBERON:0003929,1.26e-07,55;UBERON:0002100,2.77e-07,90;UBERON:0000344,4.07e-07,15;UBERON:0000160,9.97e-07,31 | |||
|phase1_expression=6.72625157840135,20.2405736430829,32.3049459966571,46.8819527525587,45.0806156951712,13.2624624810393,23.3612640595526,8.65126267058561,1.54867594366833,2.10658073689794,4.45166717386313,3.19088635981346,12.1552518251156,11.0149707047937,14.3237197580735,23.8920815519995,57.364074006508,7.09789872056035,7.40417941470989,9.33657233955666,13.0116233931137,1.09220046320974,0,50.7175980255099,49.0935861483744,32.1569899904411,38.3378176581577,26.0720191549926,33.4441218243218,28.4794046628722,29.4901579171555,4.44521471421742,3.69038872550742,0,10.6875099307972,11.6364251750945,7.9626048942324,27.6230876286359,22.6587249911902,28.2702821745851,23.5292595212406,28.6879103682547,27.1885797697446,7.80560271448579,7.60326984146359,8.81024410376071,25.0365230191373,12.8634842264463,19.1126978978991,18.8597002102055,31.0769856008305,11.5002051491977,6.37573903019398,10.8804321301702,9.74672017513146,17.4936416504444,31.2321449533245,26.2992767061496,0.606949382578793,0,0.633831403506179,8.80995783379743,23.1216646988896,33.2962895394118,33.6214563272771,38.3659262070894,11.085204089181,7.30014780110954,0.103689612308478,0,0,0.571301968807607,2.20868540951614,0.122490799214954,0.287536413054709,1.83843757322004,7.70811166995721,4.72443150915195,4.45458946443106,0.659431438650969,0.731901148819277,1.04182674111352,6.42120897703176,9.56696437053856,7.63991238884051,0.883885756421003,1.56608848879013,1.1183966749518,1.8931548333296,6.95258352982427,4.63783181922684,25.8127163094416,27.8788246820178,46.9541776724901,56.5305483179472,42.1145273871495,18.5386634573912,0,0,0,9.01397886570755,5.13305909657271,2.54805239706646,0,25.9789249213457,28.6296647986861,28.3093689208279,16.5566625592637,6.99132285847364,25.8289321972795,8.67426633830679,18.5723941770406,27.2126286762149,38.4342733409188,24.3408623770909,22.9969862133306,23.2363269670311,10.1219549843938,14.153768831198,5.82360659810673,9.49618529379692,13.091631834651,20.5030937339934,1.17112318804619,1.25668024088073,23.757506134399,2.75574786363617,14.9975682748352,3.93917703926501,4.6435098215495,1.83000241127451,0.502617408451458,7.30062144807561,7.67146371990992,4.57133698031032,5.67844420737152,3.86989582631202,10.8234064430781,4.0435641349388,25.8843482740363,1.56144531555244,1.60931473103431,0.900310649026746,2.10986744970001,0.884474488967262,0.640568601424249,0.562210347358373,5.43277078551933,1.5089759505299,0.378212160335639,0.879755620819744,3.28793598641362,2.22437799380478,5.92028683087683,7.40815691068596,1.59227413454795,9.12877143507205,9.00717674901503,7.10408748488982,4.55676699578104,3.04883877975425,4.14142741360334,3.55117103377815,4.9191057936851,4.9365476123961,4.88321283975857,4.29237442239391,5.25444040652263,4.44311594766397,5.74586124276833,7.1340552400353,3.80119967305864,9.66020507280623,12.0785776884335,2.10289948564127,0.720332286654991,60.7970560690188,14.5447811664949,2.34617075588757,2.32236671860439,4.12375876230699,7.26060688644033,8.89512175379481,8.75037880117772,17.0830462156024,21.5755630688454,18.3474702424197,16.3144307073744,15.9870551437679,23.3693046250098,19.8847005884719,28.8754846218832,1.70701110857774,3.42745537829186,0,1.83286195060783,2.52138233317913,2.94570443539338,3.03535378196435,3.09981310757165,6.90794402502049,12.2163192282583,41.2069151651137,11.1786220829783,13.562570662811,11.4679677316275,13.3887680116412,14.470629585145,19.0969388836065,20.7141218964584,25.6173658304556,31.8491239298175,25.8782771749238,29.0269939181433,26.2111645416231,42.1806726171677,39.4674309748207,49.6916827004268,10.7156850296631,3.22135400009824,3.09633455239849,3.73439188705414,4.45911471748154,5.86271901046355,3.57065461329021,4.48807390072937,7.40885177299098,7.0868700687608,6.85655505227195,8.68475567993411,10.5337838938196,11.8612228036839,36.1899081454253,35.8977751320348,18.6870423747234,9.93372286697037,5.45872005958493,4.92289083687253,0,7.06918596172244,4.10160685241134,5.85658116444958,4.30846795465598,7.40803273652911,8.68914828921337,5.09537755419898,4.85772842009873,6.72188473196017,5.53402889125133,1.92792789853084,9.36804562374573,3.73937767701236,2.76907830901079,6.92874516484649,6.63725691699814,4.37005145078967,6.95344181018927,6.97838795096823,6.496641643377,4.91896236710284,7.23599220871019,7.63420831902762,7.84294232446387,6.32073515871632,9.48767477174989,9.28219889233682,21.1072555567349,0.540183282093931,2.58717367565509,1.50035924522115,3.54680467284547,3.56737635204141,4.60737257685939,4.26250928760439,28.1606049676452,42.5782462436279,24.2581237860458,13.6855589941428,8.39615018818709,7.2375509913787,7.87857470420701,7.38634048852776,16.0314460146418,6.67531087237835,18.4540551261681,5.98521917093345,7.22258656741876,18.8368457004691,14.4895881384287,19.6749228957609,4.24946074984638,6.29781535456461,5.2515990045681,37.2321541025894,1.26534397432454,3.45643094115643,7.34436317588249,10.4544148007234,10.9181281873089,17.9369580691812,20.4980570198833,38.2163675296683,33.829508029157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| |||
|short_description=p1@Htatip2 | |||
}} |
Revision as of 13:55, 14 September 2013
Short description: | p1@Htatip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Htatip2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000085272, NM_001146049, NM_001146050, NM_001146053, NM_016865, uc009hbo.2, uc009hbp.2, uc009hbq.2, uc012flc.1, uc012fld.1_5end |
EntrezGene: | Htatip2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.46e-16 | 118 |
endoderm | 9.46e-16 | 118 |
presumptive endoderm | 9.46e-16 | 118 |
digestive system | 9.61e-15 | 116 |
digestive tract | 9.61e-15 | 116 |
primitive gut | 9.61e-15 | 116 |
subdivision of digestive tract | 1.26e-13 | 114 |
trunk mesenchyme | 1.80e-13 | 45 |
unilaminar epithelium | 1.27e-09 | 66 |
exocrine gland | 2.63e-09 | 25 |
exocrine system | 2.63e-09 | 25 |
digestive tract diverticulum | 2.71e-09 | 23 |
sac | 2.71e-09 | 23 |
liver | 5.38e-09 | 22 |
epithelial sac | 5.38e-09 | 22 |
digestive gland | 5.38e-09 | 22 |
epithelium of foregut-midgut junction | 5.38e-09 | 22 |
anatomical boundary | 5.38e-09 | 22 |
hepatobiliary system | 5.38e-09 | 22 |
foregut-midgut junction | 5.38e-09 | 22 |
hepatic diverticulum | 5.38e-09 | 22 |
liver primordium | 5.38e-09 | 22 |
septum transversum | 5.38e-09 | 22 |
liver bud | 5.38e-09 | 22 |
organ component layer | 1.08e-08 | 24 |
mesenchyme | 2.59e-08 | 61 |
entire embryonic mesenchyme | 2.59e-08 | 61 |
gastrointestinal system | 3.59e-08 | 47 |
gut epithelium | 1.26e-07 | 55 |
trunk | 2.77e-07 | 90 |
mucosa | 4.07e-07 | 15 |
intestine | 9.97e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.