FFCP PHASE1:Mm9::chr7:5008763..5008790,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=232821|HGNC=|MCL_coexpression_id=1296|UniProt=Q3ULM0|association_with_transcript=-8bp_to_ENSMUST00000045543_5end|description=CAGE_peak_4_at_Ccdc106_5end|id=chr7:5008763..5008790,+|ontology_enrichment_celltype=CL:0000117!6.54e-17!23;CL:0000337!6.54e-17!23;CL:0002319!2.98e-14!43;CL:0000221!3.74e-14!44;CL:0000133!3.74e-14!44;CL:0000540!4.62e-14!33;CL:0000047!4.62e-14!33;CL:0000031!4.62e-14!33;CL:0000404!4.62e-14!33;CL:0000055!4.36e-10!50;CL:0000393!7.27e-10!39;CL:0000211!7.27e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-29,23;CL:0000337,1.28e-29,23;CL:0000540,1.06e-18,33;CL:0000047,1.06e-18,33;CL:0000031,1.06e-18,33;CL:0000404,1.06e-18,33;CL:0002319,9.78e-16,43;CL:0000221,3.16e-15,44;CL:0000133,3.16e-15,44;CL:0000393,7.23e-15,39;CL:0000211,7.23e-15,39;CL:0002321,3.08e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.34e-33!73;UBERON:0005743!2.34e-33!73;UBERON:0000073!1.37e-31!75;UBERON:0001016!1.37e-31!75;UBERON:0001049!3.68e-29!52;UBERON:0005068!3.68e-29!52;UBERON:0006241!3.68e-29!52;UBERON:0007135!3.68e-29!52;UBERON:0000955!6.46e-27!50;UBERON:0006238!6.46e-27!50;UBERON:0002616!2.06e-26!49;UBERON:0004121!1.87e-25!102;UBERON:0000924!1.87e-25!102;UBERON:0006601!1.87e-25!102;UBERON:0000033!4.09e-25!63;UBERON:0002346!1.72e-23!71;UBERON:0003075!1.72e-23!71;UBERON:0007284!1.72e-23!71;UBERON:0002020!6.72e-23!34;UBERON:0003080!4.14e-21!40;UBERON:0003056!9.37e-21!49;UBERON:0002780!1.79e-20!39;UBERON:0001890!1.79e-20!39;UBERON:0006240!1.79e-20!39;UBERON:0002791!1.32e-18!29;UBERON:0003528!1.32e-18!29;UBERON:0001893!1.32e-18!29;UBERON:0000153!2.44e-14!94;UBERON:0007811!9.37e-14!86;UBERON:0000956!8.04e-13!21;UBERON:0001869!8.04e-13!21;UBERON:0000203!8.04e-13!21;UBERON:0002619!2.90e-11!17;UBERON:0003076!1.87e-08!12;UBERON:0003057!1.87e-08!12;UBERON:0002021!1.11e-07!10;UBERON:0000411!1.11e-07!10;UBERON:0001950!1.11e-07!10;UBERON:0002420!4.83e-07!8;UBERON:0007245!4.83e-07!8;UBERON:0010009!4.83e-07!8;UBERON:0010011!4.83e-07!8;UBERON:0000454!4.83e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.44e-45,54;UBERON:0001017,2.11e-42,73;UBERON:0001049,1.13e-41,52;UBERON:0005068,1.13e-41,52;UBERON:0006241,1.13e-41,52;UBERON:0007135,1.13e-41,52;UBERON:0001016,6.07e-41,75;UBERON:0002020,5.85e-38,34;UBERON:0002616,5.34e-32,46;UBERON:0002346,8.40e-32,64;UBERON:0003075,8.40e-32,64;UBERON:0007284,8.40e-32,64;UBERON:0000955,4.09e-31,47;UBERON:0006238,4.09e-31,47;UBERON:0004121,9.80e-30,95;UBERON:0000924,9.80e-30,95;UBERON:0006601,9.80e-30,95;UBERON:0003528,2.87e-29,29;UBERON:0002791,2.87e-29,29;UBERON:0001893,2.87e-29,29;UBERON:0003080,9.01e-29,40;UBERON:0002780,1.54e-27,39;UBERON:0001890,1.54e-27,39;UBERON:0006240,1.54e-27,39;UBERON:0010371,1.55e-26,73;UBERON:0003056,6.30e-22,49;UBERON:0010314,7.95e-19,92;UBERON:0002619,7.76e-18,17;UBERON:0000956,1.12e-17,21;UBERON:0001869,1.12e-17,21;UBERON:0000203,1.12e-17,21;UBERON:0002021,1.78e-14,10;UBERON:0000411,1.78e-14,10;UBERON:0001950,1.78e-14,10;UBERON:0000025,3.76e-13,114;UBERON:0002420,3.87e-13,8;UBERON:0007245,3.87e-13,8;UBERON:0010009,3.87e-13,8;UBERON:0010011,3.87e-13,8;UBERON:0000454,3.87e-13,8;UBERON:0003076,7.60e-13,12;UBERON:0003057,7.60e-13,12;UBERON:0004111,1.31e-11,122;UBERON:0002240,3.88e-11,6;UBERON:0005174,3.88e-11,6;UBERON:0001137,3.88e-11,6;UBERON:0001948,4.99e-10,5;UBERON:0002315,4.99e-10,5;UBERON:0000369,1.41e-08,5;UBERON:0002435,1.41e-08,5;UBERON:0000204,1.41e-08,5;UBERON:0010082,1.41e-08,5;UBERON:0011216,2.40e-08,194;UBERON:0002950,2.62e-07,4;UBERON:0001891,2.62e-07,4;UBERON:0009616,2.62e-07,4;UBERON:0010286,2.62e-07,4|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0.659058548203415,0.777719596297134,0,1.43752564364972,0,0,0,0,0,0,3.23706337375356,5.28990979272033,4.43681982454325,0,0,0,0,0,0.599200221036809,2.68952813725088,1.65903379693564,0.675029691658453,0.630974884054146,10.8547374073445,8.83474163806454,1.5923803897944,2.01275489138296,2.75765635983006,4.40463523997555,3.44755812830007,3.07213066512487,3.82470234417562,4.11694396210843,3.64639359389732,4.18774498502071,8.4414391504752,2.75036845998258,5.30331453852602,5.26775218956681,6.33758115806022,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.520455980298408,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,2.51336048176146,0,0,0,0,2.24685959107234,1.83000241127451,3.26701315493447,1.73824320192276,0.767146371990992,2.28566849015516,2.92034273521964,0.509196819251581,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.612328492361951,0.2562274405697,0.749613796477831,0.517406741478031,0,0.189106080167819,0.703804496655795,0.43839146485515,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,2.6755199218614,0,0,0,0.464473343720877,0.128867461322093,0,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0.610953983535943,0,0,0.189709611372772,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,2.22702204525186,0,0,0,0,0.430846795465598,0,0.445597348164788,0,0.404810701674894,0.584511715822624,0.790575555893047,0.963963949265421,0.425820255624806,0.712262414669021,0,0.329940245945071,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,1.15184314421485,1.2178597964584,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,7.89170114157866,0.149516546043979,0.330916980914195,0,0.645799117388655,0.168956125490778,0.117357238645754,0.39061315453185,0.209718688851422,3.62376181239009,1.72818003754719,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,3.95326289831947,2.30162618253588,4.01026859407578,2.92150409984269,4.11049511862385,1.5107877947794,2.70009000092722,1.80128481289688,3.62513927187364,1.55328093525546,0,0,0.341467211508268,0.486213434136588,0.628839487883947,1.10306105070008,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.384150914429216,1.03383844120104,0.952587382566147,0.927074607558844,0.77163688185482,0,0.735994600671987,0.342869252385415,0.70990322463735,0.715308569841963,0.436039249896986,1.31753132581463,0.676916863133412,1.09756783723664,0.789209134313529,0.679020569229309,1.12228454331548,0.355905054372522,0.886540341380071,0.409231043169689,0.77468420592983,0,1.24905288968973,1.16965804222704,0.644613162144895,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p4@Ccdc106}} | ||
|EntrezGene=232821 | |||
|HGNC= | |||
|MCL_coexpression_id=1296 | |||
|UniProt=Q3ULM0 | |||
|association_with_transcript=-8bp_to_ENSMUST00000045543_5end | |||
|description=CAGE_peak_4_at_Ccdc106_5end | |||
|id=chr7:5008763..5008790,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.54e-17!23;CL:0000337!6.54e-17!23;CL:0002319!2.98e-14!43;CL:0000221!3.74e-14!44;CL:0000133!3.74e-14!44;CL:0000540!4.62e-14!33;CL:0000047!4.62e-14!33;CL:0000031!4.62e-14!33;CL:0000404!4.62e-14!33;CL:0000055!4.36e-10!50;CL:0000393!7.27e-10!39;CL:0000211!7.27e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-29,23;CL:0000337,1.28e-29,23;CL:0000540,1.06e-18,33;CL:0000047,1.06e-18,33;CL:0000031,1.06e-18,33;CL:0000404,1.06e-18,33;CL:0002319,9.78e-16,43;CL:0000221,3.16e-15,44;CL:0000133,3.16e-15,44;CL:0000393,7.23e-15,39;CL:0000211,7.23e-15,39;CL:0002321,3.08e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.34e-33!73;UBERON:0005743!2.34e-33!73;UBERON:0000073!1.37e-31!75;UBERON:0001016!1.37e-31!75;UBERON:0001049!3.68e-29!52;UBERON:0005068!3.68e-29!52;UBERON:0006241!3.68e-29!52;UBERON:0007135!3.68e-29!52;UBERON:0000955!6.46e-27!50;UBERON:0006238!6.46e-27!50;UBERON:0002616!2.06e-26!49;UBERON:0004121!1.87e-25!102;UBERON:0000924!1.87e-25!102;UBERON:0006601!1.87e-25!102;UBERON:0000033!4.09e-25!63;UBERON:0002346!1.72e-23!71;UBERON:0003075!1.72e-23!71;UBERON:0007284!1.72e-23!71;UBERON:0002020!6.72e-23!34;UBERON:0003080!4.14e-21!40;UBERON:0003056!9.37e-21!49;UBERON:0002780!1.79e-20!39;UBERON:0001890!1.79e-20!39;UBERON:0006240!1.79e-20!39;UBERON:0002791!1.32e-18!29;UBERON:0003528!1.32e-18!29;UBERON:0001893!1.32e-18!29;UBERON:0000153!2.44e-14!94;UBERON:0007811!9.37e-14!86;UBERON:0000956!8.04e-13!21;UBERON:0001869!8.04e-13!21;UBERON:0000203!8.04e-13!21;UBERON:0002619!2.90e-11!17;UBERON:0003076!1.87e-08!12;UBERON:0003057!1.87e-08!12;UBERON:0002021!1.11e-07!10;UBERON:0000411!1.11e-07!10;UBERON:0001950!1.11e-07!10;UBERON:0002420!4.83e-07!8;UBERON:0007245!4.83e-07!8;UBERON:0010009!4.83e-07!8;UBERON:0010011!4.83e-07!8;UBERON:0000454!4.83e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.44e-45,54;UBERON:0001017,2.11e-42,73;UBERON:0001049,1.13e-41,52;UBERON:0005068,1.13e-41,52;UBERON:0006241,1.13e-41,52;UBERON:0007135,1.13e-41,52;UBERON:0001016,6.07e-41,75;UBERON:0002020,5.85e-38,34;UBERON:0002616,5.34e-32,46;UBERON:0002346,8.40e-32,64;UBERON:0003075,8.40e-32,64;UBERON:0007284,8.40e-32,64;UBERON:0000955,4.09e-31,47;UBERON:0006238,4.09e-31,47;UBERON:0004121,9.80e-30,95;UBERON:0000924,9.80e-30,95;UBERON:0006601,9.80e-30,95;UBERON:0003528,2.87e-29,29;UBERON:0002791,2.87e-29,29;UBERON:0001893,2.87e-29,29;UBERON:0003080,9.01e-29,40;UBERON:0002780,1.54e-27,39;UBERON:0001890,1.54e-27,39;UBERON:0006240,1.54e-27,39;UBERON:0010371,1.55e-26,73;UBERON:0003056,6.30e-22,49;UBERON:0010314,7.95e-19,92;UBERON:0002619,7.76e-18,17;UBERON:0000956,1.12e-17,21;UBERON:0001869,1.12e-17,21;UBERON:0000203,1.12e-17,21;UBERON:0002021,1.78e-14,10;UBERON:0000411,1.78e-14,10;UBERON:0001950,1.78e-14,10;UBERON:0000025,3.76e-13,114;UBERON:0002420,3.87e-13,8;UBERON:0007245,3.87e-13,8;UBERON:0010009,3.87e-13,8;UBERON:0010011,3.87e-13,8;UBERON:0000454,3.87e-13,8;UBERON:0003076,7.60e-13,12;UBERON:0003057,7.60e-13,12;UBERON:0004111,1.31e-11,122;UBERON:0002240,3.88e-11,6;UBERON:0005174,3.88e-11,6;UBERON:0001137,3.88e-11,6;UBERON:0001948,4.99e-10,5;UBERON:0002315,4.99e-10,5;UBERON:0000369,1.41e-08,5;UBERON:0002435,1.41e-08,5;UBERON:0000204,1.41e-08,5;UBERON:0010082,1.41e-08,5;UBERON:0011216,2.40e-08,194;UBERON:0002950,2.62e-07,4;UBERON:0001891,2.62e-07,4;UBERON:0009616,2.62e-07,4;UBERON:0010286,2.62e-07,4 | |||
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|short_description=p4@Ccdc106 | |||
}} |
Revision as of 13:31, 14 September 2013
Short description: | p4@Ccdc106 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ccdc106_5end |
Coexpression cluster: | MCL_coexpression_mm9:1296 |
Association with transcript: | -8bp_to_ENSMUST00000045543_5end |
EntrezGene: | Ccdc106 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.28e-29 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-29 | 23 |
neuron | 1.06e-18 | 33 |
neuronal stem cell | 1.06e-18 | 33 |
neuroblast | 1.06e-18 | 33 |
electrically signaling cell | 1.06e-18 | 33 |
neural cell | 9.78e-16 | 43 |
ectodermal cell | 3.16e-15 | 44 |
neurectodermal cell | 3.16e-15 | 44 |
electrically responsive cell | 7.23e-15 | 39 |
electrically active cell | 7.23e-15 | 39 |
embryonic cell | 3.08e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.