FFCP PHASE1:Mm9::chr7:4554707..4554762,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=545902|HGNC=|MCL_coexpression_id=12|UniProt=E9Q0N2|association_with_transcript=0bp_to_ENSMUST00000049113_5end|description=CAGE_peak_1_at_Ptprh_5end|id=chr7:4554707..4554762,-|ontology_enrichment_celltype=CL:0002563!7.90e-10!9;CL:0002251!7.90e-10!9;CL:0000239!1.14e-07!6;CL:0000677!1.14e-07!6;CL:0000212!1.14e-07!6;CL:0000584!1.14e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,7.00e-12,9;CL:0002251,7.00e-12,9;CL:0000239,3.45e-09,6;CL:0000677,3.45e-09,6;CL:0000584,3.45e-09,6;CL:0000075,1.09e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.45e-20!59;UBERON:0000160!1.79e-18!43;UBERON:0000344!5.41e-16!15;UBERON:0001242!4.83e-14!13;UBERON:0000060!4.83e-14!13;UBERON:0001262!4.83e-14!13;UBERON:0004786!4.83e-14!13;UBERON:0003350!7.90e-10!9;UBERON:0004808!7.90e-10!9;UBERON:0001277!7.90e-10!9;UBERON:0004923!8.04e-10!24;UBERON:0000485!1.60e-07!11;UBERON:0004119!9.51e-07!130;UBERON:0000925!9.51e-07!130;UBERON:0006595!9.51e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.41e-33,31;UBERON:0005409,2.11e-32,47;UBERON:0000344,1.41e-19,15;UBERON:0001242,3.85e-17,13;UBERON:0001262,3.85e-17,13;UBERON:0004786,3.85e-17,13;UBERON:0003350,7.00e-12,9;UBERON:0004808,7.00e-12,9;UBERON:0001277,7.00e-12,9;UBERON:0004923,2.06e-10,24;UBERON:0000485,2.81e-09,11;UBERON:0001007,7.58e-08,116;UBERON:0001555,7.58e-08,116;UBERON:0007026,7.58e-08,116;UBERON:0004119,1.56e-07,118;UBERON:0000925,1.56e-07,118;UBERON:0006595,1.56e-07,118;UBERON:0004921,9.13e-07,114|phase1_expression=0,354.210038753951,321.684462248402,394.413331544106,376.172693189707,66.1444331332846,82.9324874114116,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,162.712293980895,175.039281454251,207.297739045522,175.750894432902,175.393583406314,289.595691251514,265.135696507447,145.45521498988,0,0,0,9.82095507154334,10.9714865936605,9.39179038806898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,10.8142203501449,0,0,0,0,0,0,0,0,0,0,37.1097609086945,0,0,0,0,0,0,0,0.251333182659351,0.247194967734374,0,0,0,0,0,212.486607788659,0,0,231.188634963775,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,1.26265113531884,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,391.546257835801,136.720942965052,0,0,1.67527699718721,15.9329984452441,29.131523743678,53.072949685404,193.133328048616,93.8784041926862,85.7053062008919,110.221885510798,93.7777259042968,192.347353452003,209.005494228829,196.55243670206,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.989820737835213,0,0,0,0,0,0,19.1236936944484,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.492422699235184,146.031899151555,0,0,0,0,0,0,0,0,0,0,28.6401185404534,0,0.609958401380546,3.56417624711944,2.50905955217362,11.7915784422936,6.87808166562586,11.4888303458217,22.7727669526106,161.500256721574,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0.100826185136841,0,0,0,0,0,0,0,0,0,6.77661009788881,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,3.55594764482584,3.09052585858341,1.28367683836726,3.28506375292937,3.04175159868288,3.01802146217722,2.34103768674706,2.24088033417042,2.35485422718014,2.38146845641537,1.62238056322798,2.12200142510076,2.47251540481984,3.09117732282234,2.74295401908332,2.48466128623072,1.66905332963125,2.47088908274958,2.63506265162926,3.29996970777538,2.74391959309159,4.47218509444333,2.8518863907631,0.561142271657738,2.37270036248348,2.06859412988683,1.22769312950907,1.70430525304563,1.15743966588685,0,3.27504251823572,4.72716318906256,0,0,0|short_description=p1@Ptprh}} | ||
|EntrezGene=545902 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=E9Q0N2 | |||
|association_with_transcript=0bp_to_ENSMUST00000049113_5end | |||
|description=CAGE_peak_1_at_Ptprh_5end | |||
|id=chr7:4554707..4554762,- | |||
|ontology_enrichment_celltype=CL:0002563!7.90e-10!9;CL:0002251!7.90e-10!9;CL:0000239!1.14e-07!6;CL:0000677!1.14e-07!6;CL:0000212!1.14e-07!6;CL:0000584!1.14e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.00e-12,9;CL:0002251,7.00e-12,9;CL:0000239,3.45e-09,6;CL:0000677,3.45e-09,6;CL:0000584,3.45e-09,6;CL:0000075,1.09e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.45e-20!59;UBERON:0000160!1.79e-18!43;UBERON:0000344!5.41e-16!15;UBERON:0001242!4.83e-14!13;UBERON:0000060!4.83e-14!13;UBERON:0001262!4.83e-14!13;UBERON:0004786!4.83e-14!13;UBERON:0003350!7.90e-10!9;UBERON:0004808!7.90e-10!9;UBERON:0001277!7.90e-10!9;UBERON:0004923!8.04e-10!24;UBERON:0000485!1.60e-07!11;UBERON:0004119!9.51e-07!130;UBERON:0000925!9.51e-07!130;UBERON:0006595!9.51e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.41e-33,31;UBERON:0005409,2.11e-32,47;UBERON:0000344,1.41e-19,15;UBERON:0001242,3.85e-17,13;UBERON:0001262,3.85e-17,13;UBERON:0004786,3.85e-17,13;UBERON:0003350,7.00e-12,9;UBERON:0004808,7.00e-12,9;UBERON:0001277,7.00e-12,9;UBERON:0004923,2.06e-10,24;UBERON:0000485,2.81e-09,11;UBERON:0001007,7.58e-08,116;UBERON:0001555,7.58e-08,116;UBERON:0007026,7.58e-08,116;UBERON:0004119,1.56e-07,118;UBERON:0000925,1.56e-07,118;UBERON:0006595,1.56e-07,118;UBERON:0004921,9.13e-07,114 | |||
|phase1_expression=0,354.210038753951,321.684462248402,394.413331544106,376.172693189707,66.1444331332846,82.9324874114116,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,162.712293980895,175.039281454251,207.297739045522,175.750894432902,175.393583406314,289.595691251514,265.135696507447,145.45521498988,0,0,0,9.82095507154334,10.9714865936605,9.39179038806898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,10.8142203501449,0,0,0,0,0,0,0,0,0,0,37.1097609086945,0,0,0,0,0,0,0,0.251333182659351,0.247194967734374,0,0,0,0,0,212.486607788659,0,0,231.188634963775,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,1.26265113531884,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,391.546257835801,136.720942965052,0,0,1.67527699718721,15.9329984452441,29.131523743678,53.072949685404,193.133328048616,93.8784041926862,85.7053062008919,110.221885510798,93.7777259042968,192.347353452003,209.005494228829,196.55243670206,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.989820737835213,0,0,0,0,0,0,19.1236936944484,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.492422699235184,146.031899151555,0,0,0,0,0,0,0,0,0,0,28.6401185404534,0,0.609958401380546,3.56417624711944,2.50905955217362,11.7915784422936,6.87808166562586,11.4888303458217,22.7727669526106,161.500256721574,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0.100826185136841,0,0,0,0,0,0,0,0,0,6.77661009788881,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,3.55594764482584,3.09052585858341,1.28367683836726,3.28506375292937,3.04175159868288,3.01802146217722,2.34103768674706,2.24088033417042,2.35485422718014,2.38146845641537,1.62238056322798,2.12200142510076,2.47251540481984,3.09117732282234,2.74295401908332,2.48466128623072,1.66905332963125,2.47088908274958,2.63506265162926,3.29996970777538,2.74391959309159,4.47218509444333,2.8518863907631,0.561142271657738,2.37270036248348,2.06859412988683,1.22769312950907,1.70430525304563,1.15743966588685,0,3.27504251823572,4.72716318906256,0,0,0 | |||
|short_description=p1@Ptprh | |||
}} |
Revision as of 13:27, 14 September 2013
Short description: | p1@Ptprh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptprh_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000049113_5end |
EntrezGene: | Ptprh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.00e-12 | 9 |
epithelial cell of alimentary canal | 7.00e-12 | 9 |
brush border epithelial cell | 3.45e-09 | 6 |
gut absorptive cell | 3.45e-09 | 6 |
enterocyte | 3.45e-09 | 6 |
columnar/cuboidal epithelial cell | 1.09e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.41e-33 | 31 |
gastrointestinal system | 2.11e-32 | 47 |
mucosa | 1.41e-19 | 15 |
intestinal mucosa | 3.85e-17 | 13 |
wall of intestine | 3.85e-17 | 13 |
gastrointestinal system mucosa | 3.85e-17 | 13 |
epithelium of mucosa | 7.00e-12 | 9 |
gastrointestinal system epithelium | 7.00e-12 | 9 |
intestinal epithelium | 7.00e-12 | 9 |
organ component layer | 2.06e-10 | 24 |
simple columnar epithelium | 2.81e-09 | 11 |
digestive system | 7.58e-08 | 116 |
digestive tract | 7.58e-08 | 116 |
primitive gut | 7.58e-08 | 116 |
endoderm-derived structure | 1.56e-07 | 118 |
endoderm | 1.56e-07 | 118 |
presumptive endoderm | 1.56e-07 | 118 |
subdivision of digestive tract | 9.13e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.