FFCP PHASE1:Mm9::chr7:31227273..31227296,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=168|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:31227273..31227296,-|id=chr7:31227273..31227296,-|ontology_enrichment_celltype=CL:0000117!2.39e-13!23;CL:0000337!2.39e-13!23;CL:0000540!6.98e-11!33;CL:0000047!6.98e-11!33;CL:0000031!6.98e-11!33;CL:0000404!6.98e-11!33;CL:0000393!1.32e-09!39;CL:0000211!1.32e-09!39;CL:0002319!2.27e-09!43;CL:0000055!5.66e-09!50;CL:0000221!6.73e-09!44;CL:0000133!6.73e-09!44|ontology_enrichment_celltype_v019_2=CL:0000117,7.98e-16,23;CL:0000337,7.98e-16,23;CL:0000540,5.93e-10,33;CL:0000047,5.93e-10,33;CL:0000031,5.93e-10,33;CL:0000404,5.93e-10,33;CL:0002319,4.24e-09,43;CL:0000221,8.37e-09,44;CL:0000133,8.37e-09,44;CL:0000393,6.71e-08,39;CL:0000211,6.71e-08,39;CL:0002610,4.92e-07,3;CL:0002614,5.15e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.25e-27!73;UBERON:0005743!1.25e-27!73;UBERON:0000073!3.56e-26!75;UBERON:0001016!3.56e-26!75;UBERON:0001049!4.95e-24!52;UBERON:0005068!4.95e-24!52;UBERON:0006241!4.95e-24!52;UBERON:0007135!4.95e-24!52;UBERON:0002346!5.09e-23!71;UBERON:0003075!5.09e-23!71;UBERON:0007284!5.09e-23!71;UBERON:0000955!1.24e-22!50;UBERON:0006238!1.24e-22!50;UBERON:0004121!1.65e-22!102;UBERON:0000924!1.65e-22!102;UBERON:0006601!1.65e-22!102;UBERON:0002616!4.95e-22!49;UBERON:0000033!3.22e-19!63;UBERON:0003080!2.97e-17!40;UBERON:0002780!9.26e-17!39;UBERON:0001890!9.26e-17!39;UBERON:0006240!9.26e-17!39;UBERON:0003056!1.28e-16!49;UBERON:0002020!3.52e-16!34;UBERON:0002791!7.59e-13!29;UBERON:0003528!7.59e-13!29;UBERON:0001893!7.59e-13!29;UBERON:0007811!1.91e-09!86;UBERON:0000956!4.61e-08!21;UBERON:0001869!4.61e-08!21;UBERON:0000203!4.61e-08!21;UBERON:0000153!1.21e-07!94;UBERON:0003076!2.02e-07!12;UBERON:0003057!2.02e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.20e-31,54;UBERON:0001049,5.38e-28,52;UBERON:0005068,5.38e-28,52;UBERON:0006241,5.38e-28,52;UBERON:0007135,5.38e-28,52;UBERON:0001017,6.74e-28,73;UBERON:0001016,6.32e-27,75;UBERON:0002346,2.43e-21,64;UBERON:0003075,2.43e-21,64;UBERON:0007284,2.43e-21,64;UBERON:0002020,4.31e-21,34;UBERON:0002616,1.14e-19,46;UBERON:0004121,1.85e-19,95;UBERON:0000924,1.85e-19,95;UBERON:0006601,1.85e-19,95;UBERON:0000955,4.05e-19,47;UBERON:0006238,4.05e-19,47;UBERON:0010371,8.62e-18,73;UBERON:0002780,1.66e-17,39;UBERON:0001890,1.66e-17,39;UBERON:0006240,1.66e-17,39;UBERON:0003080,6.16e-17,40;UBERON:0003528,2.54e-14,29;UBERON:0002791,2.54e-14,29;UBERON:0001893,2.54e-14,29;UBERON:0003056,7.33e-13,49;UBERON:0010314,1.34e-12,92;UBERON:0003076,2.29e-12,12;UBERON:0003057,2.29e-12,12;UBERON:0002240,3.18e-11,6;UBERON:0005174,3.18e-11,6;UBERON:0001137,3.18e-11,6;UBERON:0011216,1.77e-10,194;UBERON:0001948,1.98e-09,5;UBERON:0002315,1.98e-09,5;UBERON:0000025,8.76e-09,114;UBERON:0002420,1.22e-08,8;UBERON:0007245,1.22e-08,8;UBERON:0010009,1.22e-08,8;UBERON:0010011,1.22e-08,8;UBERON:0000454,1.22e-08,8;UBERON:0000956,7.74e-08,21;UBERON:0001869,7.74e-08,21;UBERON:0000203,7.74e-08,21;UBERON:0004111,9.49e-08,122;UBERON:0002021,2.76e-07,10;UBERON:0000411,2.76e-07,10;UBERON:0001950,2.76e-07,10;UBERON:0004684,4.92e-07,3;UBERON:0002275,4.92e-07,3;UBERON:0002038,5.15e-07,3;UBERON:0009663,5.15e-07,3;UBERON:0009661,5.15e-07,3;UBERON:0000125,5.15e-07,3;UBERON:0002308,5.15e-07,3|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0,0,0,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,1.15265491596466,0.622137673850866,0.810035629990144,1.26194976810829,1.42825492201902,1.32521124570968,0.857435594504678,0.479227355091182,0,3.30347642998166,1.53224805702225,1.84327839907492,0.527545150920775,1.37231465403614,1.04182674111352,1.95428099300967,2.25105044012672,2.29197371665215,3.24091444021034,1.13897344639282,1.1183966749518,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0.292780797011547,10.2628886338593,2.81002760729451,0,0,0,0.748953197024114,0.457500602818626,2.63874139437015,1.21677024134594,2.30143911597297,2.49345653471472,1.1356888414743,0,0,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.05144974282064,2.57261530948211,0.991256348951394,0.793351699990633,0,0,0,0,0,0,2.37264530772256,0.329397909448022,0,0,1.16978452271472,2.69645822596266,1.72910439899755,1.39398891278057,0.379335801906163,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0.608580364165509,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,2.69586879162067,0,0,0.315508219416257,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0.395287777946524,0.963963949265421,0,0.178065603667255,0,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0.680879211507576,0.18006109403131,0.905510786479282,0.643011105094777,0,1.07021290561242,1.31639216481697,1.2178597964584,0,0.21183207086382,0,0,0,0,0.119372344003136,0,2.62332752966866,2.22510362412612,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.330613822901344,0.26175594198403,0,0,0.56369293868419,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0.19318959403219,0,0,0.214368379079066,0,1.6942555278512,2.30162618253588,3.43737308063638,1.71853182343688,0,0.755393897389701,0.675022500231806,2.70192721934532,0.906284817968409,2.07104124700728,0,0,0.512200817262403,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.474540072496697,0.492522411877817,0,0.154936841185966,0,1.74867404556562,0,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p@chr7:31227273..31227296,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:31227273..31227296,- | |||
|id=chr7:31227273..31227296,- | |||
|ontology_enrichment_celltype=CL:0000117!2.39e-13!23;CL:0000337!2.39e-13!23;CL:0000540!6.98e-11!33;CL:0000047!6.98e-11!33;CL:0000031!6.98e-11!33;CL:0000404!6.98e-11!33;CL:0000393!1.32e-09!39;CL:0000211!1.32e-09!39;CL:0002319!2.27e-09!43;CL:0000055!5.66e-09!50;CL:0000221!6.73e-09!44;CL:0000133!6.73e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.98e-16,23;CL:0000337,7.98e-16,23;CL:0000540,5.93e-10,33;CL:0000047,5.93e-10,33;CL:0000031,5.93e-10,33;CL:0000404,5.93e-10,33;CL:0002319,4.24e-09,43;CL:0000221,8.37e-09,44;CL:0000133,8.37e-09,44;CL:0000393,6.71e-08,39;CL:0000211,6.71e-08,39;CL:0002610,4.92e-07,3;CL:0002614,5.15e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-27!73;UBERON:0005743!1.25e-27!73;UBERON:0000073!3.56e-26!75;UBERON:0001016!3.56e-26!75;UBERON:0001049!4.95e-24!52;UBERON:0005068!4.95e-24!52;UBERON:0006241!4.95e-24!52;UBERON:0007135!4.95e-24!52;UBERON:0002346!5.09e-23!71;UBERON:0003075!5.09e-23!71;UBERON:0007284!5.09e-23!71;UBERON:0000955!1.24e-22!50;UBERON:0006238!1.24e-22!50;UBERON:0004121!1.65e-22!102;UBERON:0000924!1.65e-22!102;UBERON:0006601!1.65e-22!102;UBERON:0002616!4.95e-22!49;UBERON:0000033!3.22e-19!63;UBERON:0003080!2.97e-17!40;UBERON:0002780!9.26e-17!39;UBERON:0001890!9.26e-17!39;UBERON:0006240!9.26e-17!39;UBERON:0003056!1.28e-16!49;UBERON:0002020!3.52e-16!34;UBERON:0002791!7.59e-13!29;UBERON:0003528!7.59e-13!29;UBERON:0001893!7.59e-13!29;UBERON:0007811!1.91e-09!86;UBERON:0000956!4.61e-08!21;UBERON:0001869!4.61e-08!21;UBERON:0000203!4.61e-08!21;UBERON:0000153!1.21e-07!94;UBERON:0003076!2.02e-07!12;UBERON:0003057!2.02e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.20e-31,54;UBERON:0001049,5.38e-28,52;UBERON:0005068,5.38e-28,52;UBERON:0006241,5.38e-28,52;UBERON:0007135,5.38e-28,52;UBERON:0001017,6.74e-28,73;UBERON:0001016,6.32e-27,75;UBERON:0002346,2.43e-21,64;UBERON:0003075,2.43e-21,64;UBERON:0007284,2.43e-21,64;UBERON:0002020,4.31e-21,34;UBERON:0002616,1.14e-19,46;UBERON:0004121,1.85e-19,95;UBERON:0000924,1.85e-19,95;UBERON:0006601,1.85e-19,95;UBERON:0000955,4.05e-19,47;UBERON:0006238,4.05e-19,47;UBERON:0010371,8.62e-18,73;UBERON:0002780,1.66e-17,39;UBERON:0001890,1.66e-17,39;UBERON:0006240,1.66e-17,39;UBERON:0003080,6.16e-17,40;UBERON:0003528,2.54e-14,29;UBERON:0002791,2.54e-14,29;UBERON:0001893,2.54e-14,29;UBERON:0003056,7.33e-13,49;UBERON:0010314,1.34e-12,92;UBERON:0003076,2.29e-12,12;UBERON:0003057,2.29e-12,12;UBERON:0002240,3.18e-11,6;UBERON:0005174,3.18e-11,6;UBERON:0001137,3.18e-11,6;UBERON:0011216,1.77e-10,194;UBERON:0001948,1.98e-09,5;UBERON:0002315,1.98e-09,5;UBERON:0000025,8.76e-09,114;UBERON:0002420,1.22e-08,8;UBERON:0007245,1.22e-08,8;UBERON:0010009,1.22e-08,8;UBERON:0010011,1.22e-08,8;UBERON:0000454,1.22e-08,8;UBERON:0000956,7.74e-08,21;UBERON:0001869,7.74e-08,21;UBERON:0000203,7.74e-08,21;UBERON:0004111,9.49e-08,122;UBERON:0002021,2.76e-07,10;UBERON:0000411,2.76e-07,10;UBERON:0001950,2.76e-07,10;UBERON:0004684,4.92e-07,3;UBERON:0002275,4.92e-07,3;UBERON:0002038,5.15e-07,3;UBERON:0009663,5.15e-07,3;UBERON:0009661,5.15e-07,3;UBERON:0000125,5.15e-07,3;UBERON:0002308,5.15e-07,3 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0,0,0,0,1.43752564364972,0,0,0,0,0.286533439938757,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,1.15265491596466,0.622137673850866,0.810035629990144,1.26194976810829,1.42825492201902,1.32521124570968,0.857435594504678,0.479227355091182,0,3.30347642998166,1.53224805702225,1.84327839907492,0.527545150920775,1.37231465403614,1.04182674111352,1.95428099300967,2.25105044012672,2.29197371665215,3.24091444021034,1.13897344639282,1.1183966749518,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0.292780797011547,10.2628886338593,2.81002760729451,0,0,0,0.748953197024114,0.457500602818626,2.63874139437015,1.21677024134594,2.30143911597297,2.49345653471472,1.1356888414743,0,0,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.05144974282064,2.57261530948211,0.991256348951394,0.793351699990633,0,0,0,0,0,0,2.37264530772256,0.329397909448022,0,0,1.16978452271472,2.69645822596266,1.72910439899755,1.39398891278057,0.379335801906163,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0.608580364165509,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,2.69586879162067,0,0,0.315508219416257,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0.395287777946524,0.963963949265421,0,0.178065603667255,0,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0.680879211507576,0.18006109403131,0.905510786479282,0.643011105094777,0,1.07021290561242,1.31639216481697,1.2178597964584,0,0.21183207086382,0,0,0,0,0.119372344003136,0,2.62332752966866,2.22510362412612,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.330613822901344,0.26175594198403,0,0,0.56369293868419,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0.19318959403219,0,0,0.214368379079066,0,1.6942555278512,2.30162618253588,3.43737308063638,1.71853182343688,0,0.755393897389701,0.675022500231806,2.70192721934532,0.906284817968409,2.07104124700728,0,0,0.512200817262403,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.474540072496697,0.492522411877817,0,0.154936841185966,0,1.74867404556562,0,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr7:31227273..31227296,- | |||
}} |
Revision as of 13:14, 14 September 2013
Short description: | p@chr7:31227273..31227296, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:31227273..31227296, - |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.98e-16 | 23 |
neuroblast (sensu Vertebrata) | 7.98e-16 | 23 |
neuron | 5.93e-10 | 33 |
neuronal stem cell | 5.93e-10 | 33 |
neuroblast | 5.93e-10 | 33 |
electrically signaling cell | 5.93e-10 | 33 |
neural cell | 4.24e-09 | 43 |
ectodermal cell | 8.37e-09 | 44 |
neurectodermal cell | 8.37e-09 | 44 |
electrically responsive cell | 6.71e-08 | 39 |
electrically active cell | 6.71e-08 | 39 |
raphe nuclei neuron | 4.92e-07 | 3 |
neuron of the substantia nigra | 5.15e-07 | 3 |
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