FFCP PHASE1:Mm9::chr7:25292246..25292259,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=232969|HGNC=|MCL_coexpression_id=1294|UniProt=E9PZE0|association_with_transcript=97bp_to_ENSMUST00000085998_5end|description=CAGE_peak_6_at_Zfp428_5end|id=chr7:25292246..25292259,+|ontology_enrichment_celltype=CL:0000221!1.18e-17!44;CL:0000133!1.18e-17!44;CL:0002319!3.88e-17!43;CL:0000117!9.53e-15!23;CL:0000337!9.53e-15!23;CL:0000055!2.71e-14!50;CL:0000540!1.40e-13!33;CL:0000047!1.40e-13!33;CL:0000031!1.40e-13!33;CL:0000404!1.40e-13!33;CL:0000393!1.48e-11!39;CL:0000211!1.48e-11!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.20e-28,23;CL:0000337,2.20e-28,23;CL:0000221,2.93e-23,44;CL:0000133,2.93e-23,44;CL:0002319,2.65e-22,43;CL:0000540,4.95e-19,33;CL:0000047,4.95e-19,33;CL:0000031,4.95e-19,33;CL:0000404,4.95e-19,33;CL:0000393,6.06e-15,39;CL:0000211,6.06e-15,39;CL:0002321,4.05e-11,70;CL:0002609,4.44e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.01e-28!73;UBERON:0005743!2.01e-28!73;UBERON:0000073!3.23e-28!75;UBERON:0001016!3.23e-28!75;UBERON:0004121!5.89e-25!102;UBERON:0000924!5.89e-25!102;UBERON:0006601!5.89e-25!102;UBERON:0000033!1.79e-23!63;UBERON:0001049!4.64e-22!52;UBERON:0005068!4.64e-22!52;UBERON:0006241!4.64e-22!52;UBERON:0007135!4.64e-22!52;UBERON:0000955!2.39e-21!50;UBERON:0006238!2.39e-21!50;UBERON:0002616!8.46e-21!49;UBERON:0002020!3.16e-20!34;UBERON:0002346!3.46e-20!71;UBERON:0003075!3.46e-20!71;UBERON:0007284!3.46e-20!71;UBERON:0003056!4.69e-19!49;UBERON:0003080!3.33e-18!40;UBERON:0002780!9.37e-18!39;UBERON:0001890!9.37e-18!39;UBERON:0006240!9.37e-18!39;UBERON:0002791!8.60e-17!29;UBERON:0003528!8.60e-17!29;UBERON:0001893!8.60e-17!29;UBERON:0007811!1.62e-13!86;UBERON:0000153!3.33e-13!94;UBERON:0000956!2.51e-12!21;UBERON:0001869!2.51e-12!21;UBERON:0000203!2.51e-12!21;UBERON:0002619!4.70e-10!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.40e-40,73;UBERON:0000073,1.26e-38,54;UBERON:0001016,2.46e-38,75;UBERON:0002020,4.60e-36,34;UBERON:0001049,2.84e-35,52;UBERON:0005068,2.84e-35,52;UBERON:0006241,2.84e-35,52;UBERON:0007135,2.84e-35,52;UBERON:0004121,1.05e-33,95;UBERON:0000924,1.05e-33,95;UBERON:0006601,1.05e-33,95;UBERON:0002346,3.78e-32,64;UBERON:0003075,3.78e-32,64;UBERON:0007284,3.78e-32,64;UBERON:0003080,3.13e-31,40;UBERON:0000955,1.37e-30,47;UBERON:0006238,1.37e-30,47;UBERON:0002780,2.52e-30,39;UBERON:0001890,2.52e-30,39;UBERON:0006240,2.52e-30,39;UBERON:0003056,8.93e-30,49;UBERON:0002616,1.52e-29,46;UBERON:0003528,3.72e-29,29;UBERON:0002791,3.72e-29,29;UBERON:0001893,3.72e-29,29;UBERON:0010371,4.82e-28,73;UBERON:0010314,1.51e-20,92;UBERON:0000956,3.72e-20,21;UBERON:0001869,3.72e-20,21;UBERON:0000203,3.72e-20,21;UBERON:0002619,1.29e-15,17;UBERON:0000025,3.13e-10,114;UBERON:0002021,4.56e-10,10;UBERON:0000411,4.56e-10,10;UBERON:0001950,4.56e-10,10;UBERON:0002420,5.18e-10,8;UBERON:0007245,5.18e-10,8;UBERON:0010009,5.18e-10,8;UBERON:0010011,5.18e-10,8;UBERON:0000454,5.18e-10,8;UBERON:0004111,1.61e-09,122;UBERON:0001948,5.66e-08,5;UBERON:0002315,5.66e-08,5;UBERON:0000369,1.04e-07,5;UBERON:0002435,1.04e-07,5;UBERON:0000204,1.04e-07,5;UBERON:0010082,1.04e-07,5;UBERON:0001954,5.56e-07,7;UBERON:0003022,5.56e-07,7;UBERON:0002421,5.56e-07,7;UBERON:0000349,5.56e-07,7;UBERON:0002600,5.56e-07,7|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,0.680346321208558,0.198581902401771,0,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,1.23012957516914,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.304130793658544,0,1.56478268869608,1.96222640742402,0.878744730937887,1.36100929351998,0.699932108126813,5.75010257459886,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,5.05791152148994,5.81890077199236,9.50747105259269,0,0.889294796111139,0,0.988866362566974,0,2.09720077362883,3.45796474789399,2.90330914463737,3.10513658162888,2.73422449756797,2.85650984403804,3.3130281142742,3.79721477566358,2.49198224647415,6.43453150627015,1.10115880999389,1.14918604276669,1.0752457327937,5.53922408466814,4.48289453651807,4.68822033501084,1.3959149950069,1.12552522006336,1.5279824777681,7.66034322231536,2.84743361598206,3.91438836233131,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.70667914902068,1.54927761754349,0,0,0,0,0.253359865475099,0,0,0,0,0.520455980298408,0,0.461230994512117,0.301445281105245,0.117588707135705,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0.239630249011841,0,0.127070227073065,1.3481157546434,1.37250180845588,3.39266750704734,1.39059456153821,2.30143911597297,2.0778804455956,2.10913641988085,0.509196819251581,0.497627882440372,0,0.210441855886474,0.520481771850815,1.14951052216736,1.26043490863744,1.05493372485001,1.2246569847239,0.2562274405697,0.655912071918102,0.258703370739016,1.5089759505299,0.945530400839096,0.703804496655795,0.219195732427575,0,0.348252166522167,0.205782136407943,0.597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| ||
|EntrezGene=232969 | |||
|HGNC= | |||
|MCL_coexpression_id=1294 | |||
|UniProt=E9PZE0 | |||
|association_with_transcript=97bp_to_ENSMUST00000085998_5end | |||
|description=CAGE_peak_6_at_Zfp428_5end | |||
|id=chr7:25292246..25292259,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.18e-17!44;CL:0000133!1.18e-17!44;CL:0002319!3.88e-17!43;CL:0000117!9.53e-15!23;CL:0000337!9.53e-15!23;CL:0000055!2.71e-14!50;CL:0000540!1.40e-13!33;CL:0000047!1.40e-13!33;CL:0000031!1.40e-13!33;CL:0000404!1.40e-13!33;CL:0000393!1.48e-11!39;CL:0000211!1.48e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.20e-28,23;CL:0000337,2.20e-28,23;CL:0000221,2.93e-23,44;CL:0000133,2.93e-23,44;CL:0002319,2.65e-22,43;CL:0000540,4.95e-19,33;CL:0000047,4.95e-19,33;CL:0000031,4.95e-19,33;CL:0000404,4.95e-19,33;CL:0000393,6.06e-15,39;CL:0000211,6.06e-15,39;CL:0002321,4.05e-11,70;CL:0002609,4.44e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.01e-28!73;UBERON:0005743!2.01e-28!73;UBERON:0000073!3.23e-28!75;UBERON:0001016!3.23e-28!75;UBERON:0004121!5.89e-25!102;UBERON:0000924!5.89e-25!102;UBERON:0006601!5.89e-25!102;UBERON:0000033!1.79e-23!63;UBERON:0001049!4.64e-22!52;UBERON:0005068!4.64e-22!52;UBERON:0006241!4.64e-22!52;UBERON:0007135!4.64e-22!52;UBERON:0000955!2.39e-21!50;UBERON:0006238!2.39e-21!50;UBERON:0002616!8.46e-21!49;UBERON:0002020!3.16e-20!34;UBERON:0002346!3.46e-20!71;UBERON:0003075!3.46e-20!71;UBERON:0007284!3.46e-20!71;UBERON:0003056!4.69e-19!49;UBERON:0003080!3.33e-18!40;UBERON:0002780!9.37e-18!39;UBERON:0001890!9.37e-18!39;UBERON:0006240!9.37e-18!39;UBERON:0002791!8.60e-17!29;UBERON:0003528!8.60e-17!29;UBERON:0001893!8.60e-17!29;UBERON:0007811!1.62e-13!86;UBERON:0000153!3.33e-13!94;UBERON:0000956!2.51e-12!21;UBERON:0001869!2.51e-12!21;UBERON:0000203!2.51e-12!21;UBERON:0002619!4.70e-10!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.40e-40,73;UBERON:0000073,1.26e-38,54;UBERON:0001016,2.46e-38,75;UBERON:0002020,4.60e-36,34;UBERON:0001049,2.84e-35,52;UBERON:0005068,2.84e-35,52;UBERON:0006241,2.84e-35,52;UBERON:0007135,2.84e-35,52;UBERON:0004121,1.05e-33,95;UBERON:0000924,1.05e-33,95;UBERON:0006601,1.05e-33,95;UBERON:0002346,3.78e-32,64;UBERON:0003075,3.78e-32,64;UBERON:0007284,3.78e-32,64;UBERON:0003080,3.13e-31,40;UBERON:0000955,1.37e-30,47;UBERON:0006238,1.37e-30,47;UBERON:0002780,2.52e-30,39;UBERON:0001890,2.52e-30,39;UBERON:0006240,2.52e-30,39;UBERON:0003056,8.93e-30,49;UBERON:0002616,1.52e-29,46;UBERON:0003528,3.72e-29,29;UBERON:0002791,3.72e-29,29;UBERON:0001893,3.72e-29,29;UBERON:0010371,4.82e-28,73;UBERON:0010314,1.51e-20,92;UBERON:0000956,3.72e-20,21;UBERON:0001869,3.72e-20,21;UBERON:0000203,3.72e-20,21;UBERON:0002619,1.29e-15,17;UBERON:0000025,3.13e-10,114;UBERON:0002021,4.56e-10,10;UBERON:0000411,4.56e-10,10;UBERON:0001950,4.56e-10,10;UBERON:0002420,5.18e-10,8;UBERON:0007245,5.18e-10,8;UBERON:0010009,5.18e-10,8;UBERON:0010011,5.18e-10,8;UBERON:0000454,5.18e-10,8;UBERON:0004111,1.61e-09,122;UBERON:0001948,5.66e-08,5;UBERON:0002315,5.66e-08,5;UBERON:0000369,1.04e-07,5;UBERON:0002435,1.04e-07,5;UBERON:0000204,1.04e-07,5;UBERON:0010082,1.04e-07,5;UBERON:0001954,5.56e-07,7;UBERON:0003022,5.56e-07,7;UBERON:0002421,5.56e-07,7;UBERON:0000349,5.56e-07,7;UBERON:0002600,5.56e-07,7 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,0.680346321208558,0.198581902401771,0,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,1.23012957516914,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.304130793658544,0,1.56478268869608,1.96222640742402,0.878744730937887,1.36100929351998,0.699932108126813,5.75010257459886,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,5.05791152148994,5.81890077199236,9.50747105259269,0,0.889294796111139,0,0.988866362566974,0,2.09720077362883,3.45796474789399,2.90330914463737,3.10513658162888,2.73422449756797,2.85650984403804,3.3130281142742,3.79721477566358,2.49198224647415,6.43453150627015,1.10115880999389,1.14918604276669,1.0752457327937,5.53922408466814,4.48289453651807,4.68822033501084,1.3959149950069,1.12552522006336,1.5279824777681,7.66034322231536,2.84743361598206,3.91438836233131,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.70667914902068,1.54927761754349,0,0,0,0,0.253359865475099,0,0,0,0,0.520455980298408,0,0.461230994512117,0.301445281105245,0.117588707135705,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0.239630249011841,0,0.127070227073065,1.3481157546434,1.37250180845588,3.39266750704734,1.39059456153821,2.30143911597297,2.0778804455956,2.10913641988085,0.509196819251581,0.497627882440372,0,0.210441855886474,0.520481771850815,1.14951052216736,1.26043490863744,1.05493372485001,1.2246569847239,0.2562274405697,0.655912071918102,0.258703370739016,1.5089759505299,0.945530400839096,0.703804496655795,0.219195732427575,0,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0,0.590292695242212,1.23413690309903,0.232533944750408,0.536546802799238,0.700592054203017,0.329119699826961,0.32833492815819,0,0.292399974850665,0,0.134206418760372,1.68231958851302,2.6755199218614,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0.948339504765408,0.685491075658373,1.1270773567308,0.203651327845314,0,0.280543279561274,0.252946148497029,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.714130922658041,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0.963303539926752,0.937693492737625,0.163934945376675,0,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0,0.566153061577665,1.21443210502468,0.584511715822624,0.395287777946524,1.60660658210904,0.141940085208269,0.890328018336276,0.325773918707152,0,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,1.08036656418786,1.03486947026204,0.643011105094777,1.77340233642274,0,0.987294123612726,1.522324745573,0.23467170806371,0.42366414172764,0,0,0.484393280087717,0.180938774784468,0.238744688006273,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0.339956859987711,0,0,0,0.316335993581135,0.609958401380546,0.108005340821801,0.836353184057875,0.218362563746178,0,0.330613822901344,0,0,0.621339313086926,1.69107881605257,0.747582730219894,0.827292452285488,0,0.516639293910924,0.168956125490778,0.234714477291508,0.2604087696879,0.629156066554265,0.724752362478018,0,0.316011120628178,0.405450430580328,0.513554785824136,0.129920822977795,0,0.596044064343795,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.453460767230423,0.665957860122194,0.269141569828427,0.335769232728157,0,0,0.183151624267265,0.214368379079066,0,2.25900737046827,4.14292712856459,4.58316410751517,1.89038500578056,1.37016503954128,1.5107877947794,0.675022500231806,2.2516060161211,1.81256963593682,3.62432218226274,1.24544817101012,0,1.53660245178721,0.486213434136588,2.09613162627982,0.919217542250071,0.888986911206461,1.23621034343337,0,0,1.2673964994512,0.565879024158229,0.749132059759059,0.384150914429216,0.516919220600519,0,0.463537303779422,0.38581844092741,0.412085900803307,0.588795680537589,0.685738504770831,1.06485483695602,1.43061713968393,1.16277133305863,0.564656282491984,0.592302255241736,0.914639864363863,0.263069711437843,0.543216455383447,0.561142271657738,0.830445126869219,0.394017929502254,0.409231043169689,0.464810523557898,0.964533054905707,1.99848462350357,0.701794825336225,1.71896843238639,0.57386499620653,0,0.231867835620421 | |||
|short_description=p6@Zfp428 | |||
}} |
Revision as of 12:48, 14 September 2013
Short description: | p6@Zfp428 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Zfp428_5end |
Coexpression cluster: | MCL_coexpression_mm9:1294 |
Association with transcript: | 97bp_to_ENSMUST00000085998_5end |
EntrezGene: | Zfp428 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.20e-28 | 23 |
neuroblast (sensu Vertebrata) | 2.20e-28 | 23 |
ectodermal cell | 2.93e-23 | 44 |
neurectodermal cell | 2.93e-23 | 44 |
neural cell | 2.65e-22 | 43 |
neuron | 4.95e-19 | 33 |
neuronal stem cell | 4.95e-19 | 33 |
neuroblast | 4.95e-19 | 33 |
electrically signaling cell | 4.95e-19 | 33 |
electrically responsive cell | 6.06e-15 | 39 |
electrically active cell | 6.06e-15 | 39 |
embryonic cell | 4.05e-11 | 70 |
neuron of cerebral cortex | 4.44e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.