FFCP PHASE1:Hg19::chrX:53310706..53310716,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23096|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29059|TSSclassifier=S|UniProt=|association_with_transcript=59bp_to_ENST00000462054,ENST00000485377,ENST00000498281_5end|description=CAGE_peak_4_at_IQSEC2_5end|id=chrX:53310706..53310716,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000346;5.83e-08;3!CL:1000428;5.83e-08;3!CL:0002564;5.07e-07;3|ontology_enrichment_celltype_v019_2=CL:0000346,4.43e-08,3;CL:1000428,4.43e-08,3;CL:0002564,8.27e-07,3|ontology_enrichment_development_v019=UBERON:0008947;2.61e-10;29|ontology_enrichment_disease=DOID:0050687!3.68e-07!143;DOID:305!7.82e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.06e-07,106;DOID:0050687,1.48e-07,143|ontology_enrichment_uberon=UBERON:0001737!5.90e-07!9;UBERON:0002204!6.94e-07!167|ontology_enrichment_uberon_v019=UBERON:0001737;4.53e-15;9!UBERON:0001557;4.53e-15;9!UBERON:0000072;2.43e-08;37!UBERON:0000412;5.83e-08;3!UBERON:0001992;5.83e-08;3!UBERON:0000065;1.42e-07;44!UBERON:0011135;4.75e-07;5!UBERON:0002216;4.75e-07;5!UBERON:0011134;4.75e-07;5!UBERON:0002209;4.75e-07;5!UBERON:0002213;4.75e-07;5!UBERON:0007844;4.75e-07;5!UBERON:0011138;4.75e-07;5!UBERON:0001130;4.75e-07;5!UBERON:0001066;4.75e-07;5!UBERON:0001468;4.75e-07;5!UBERON:0002242;5.07e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.60e-15,9;UBERON:0008947,4.79e-10,38;UBERON:0003258,4.79e-10,38;UBERON:0000412,4.43e-08,3;UBERON:0001992,4.43e-08,3;UBERON:0000072,2.03e-07,47;UBERON:0011135,5.28e-07,5;UBERON:0002216,5.28e-07,5;UBERON:0011134,5.28e-07,5;UBERON:0002209,5.28e-07,5;UBERON:0002213,5.28e-07,5;UBERON:0005856,5.28e-07,5;UBERON:0005866,5.28e-07,5;UBERON:0005863,5.28e-07,5;UBERON:0007844,5.28e-07,5;UBERON:0011138,5.28e-07,5;UBERON:0001130,5.28e-07,5;UBERON:0001066,5.28e-07,5;UBERON:0001468,5.28e-07,5;UBERON:0000065,6.78e-07,54;UBERON:0002242,8.27e-07,3;UBERON:0003068,8.27e-07,3;UBERON:0002328,8.27e-07,3;UBERON:0004880,8.27e-07,3|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,1.48519623552056,0.994192127183747,0.672325146451775,0,0.730310090387373,0,0.861847406537515,2.24400760368678,0.626909442956176,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0,0,0,0,0.200544447470142,0.434021741431704,0.223915474239924,0,0.257575567634187,1.16318591023652,1.13362783106643,1.69808842831471,0.929716147622738,0.411167888021826,0.929119112685311,0,1.5369642391746,0.47296445977717,0,0,0,1.12945403725563,1.36453075028923,1.12361742222542,0.306083892370903,0.641858054152187,2.55734850319616,0,0.598390972864896,0.852449501065388,0.870627715885752,0,1.24564449799115,1.00499466102697,1.0429658368404,0.868755378820466,0,0,0.632924774881769,0.211255286311942,0,0.628975936525128,0.561643155732475,0,0.64290234678832,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.144846518960824,0.795285947051099,0,2.6469748805939,0.665188192387692,1.22968699970376,1.63723844372141,0.364295288292542,0,0,0,0.132957960518865,0.953962497221368,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0,0,0,0,1.12135520028461,0,0.24666754841716,0,0.134710672069688,0,1.81628913173918,0.576175924479999,1.17160715916898,0.312160076830321,0,0,0.117434498643765,0.485618833104395,0,1.02077085627447,0.122834317311768,0.826606249406124,1.18800285728205,0.989067717114227,0.910161361938026,0.718618141816238,0,0.250237039743928,0,0.438977620880838,0.919463387397059,0.901428353439581,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0,0.368199594569197,0,0,0.503760491138201,0.508681776931463,0,1.09098448236334,0.573609190778008,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,4.69348596989448,2.57296375277154,1.38134921352481,0,0,2.12952240071719,1.51726221070292,1.44606617930089,1.43382164552112,2.61455332910887,1.18635309555548,1.21348177344148,2.35465758150415,0.38474715694639,0,0,0,0,0,0,0,0,0,0.686271241194102,0.329250856225877,0,0,0,0.325808305310325,0,0,0.695582429850461,0.117408694235822,0,0.462985512576611,0,0.790204397959275,0,0.492434012174795,0.468008530278475,0.445893486866185,0.93733833986777,0.839910640994298,0.708875486211932,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0,0,4.37311228946907,0.87192013766656,1.7601188597028,0.258543431515556,0,0,0.26593811658487,1.04007436911366,1.54324424557285,0,1.3321108950805,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,0.254094624222463,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29059 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=59bp_to_ENST00000462054,ENST00000485377,ENST00000498281_5end | |||
|description=CAGE_peak_4_at_IQSEC2_5end | |||
|id=chrX:53310706..53310716,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;5.83e-08;3!CL:1000428;5.83e-08;3!CL:0002564;5.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,4.43e-08,3;CL:1000428,4.43e-08,3;CL:0002564,8.27e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.61e-10;29 | |||
|ontology_enrichment_disease=DOID:0050687!3.68e-07!143;DOID:305!7.82e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.06e-07,106;DOID:0050687,1.48e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.90e-07!9;UBERON:0002204!6.94e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.53e-15;9!UBERON:0001557;4.53e-15;9!UBERON:0000072;2.43e-08;37!UBERON:0000412;5.83e-08;3!UBERON:0001992;5.83e-08;3!UBERON:0000065;1.42e-07;44!UBERON:0011135;4.75e-07;5!UBERON:0002216;4.75e-07;5!UBERON:0011134;4.75e-07;5!UBERON:0002209;4.75e-07;5!UBERON:0002213;4.75e-07;5!UBERON:0007844;4.75e-07;5!UBERON:0011138;4.75e-07;5!UBERON:0001130;4.75e-07;5!UBERON:0001066;4.75e-07;5!UBERON:0001468;4.75e-07;5!UBERON:0002242;5.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.60e-15,9;UBERON:0008947,4.79e-10,38;UBERON:0003258,4.79e-10,38;UBERON:0000412,4.43e-08,3;UBERON:0001992,4.43e-08,3;UBERON:0000072,2.03e-07,47;UBERON:0011135,5.28e-07,5;UBERON:0002216,5.28e-07,5;UBERON:0011134,5.28e-07,5;UBERON:0002209,5.28e-07,5;UBERON:0002213,5.28e-07,5;UBERON:0005856,5.28e-07,5;UBERON:0005866,5.28e-07,5;UBERON:0005863,5.28e-07,5;UBERON:0007844,5.28e-07,5;UBERON:0011138,5.28e-07,5;UBERON:0001130,5.28e-07,5;UBERON:0001066,5.28e-07,5;UBERON:0001468,5.28e-07,5;UBERON:0000065,6.78e-07,54;UBERON:0002242,8.27e-07,3;UBERON:0003068,8.27e-07,3;UBERON:0002328,8.27e-07,3;UBERON:0004880,8.27e-07,3 | |||
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| |||
|short_description=p4@IQSEC2 | |||
}} |
Revision as of 12:13, 14 September 2013
Short description: | p4@IQSEC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_IQSEC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_ENST00000462054, ENST00000485377, ENST00000498281_5end |
EntrezGene: | IQSEC2 |
HGNC: | 29059 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 4.43e-08 | 3 |
stem cell of epidermis | 4.43e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 8.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.60e-15 | 9 |
respiratory primordium | 4.79e-10 | 38 |
endoderm of foregut | 4.79e-10 | 38 |
dermal papilla | 4.43e-08 | 3 |
papillary layer of dermis | 4.43e-08 | 3 |
segment of respiratory tract | 2.03e-07 | 47 |
intervertebral cartilage | 5.28e-07 | 5 |
symphysis | 5.28e-07 | 5 |
nonsynovial joint | 5.28e-07 | 5 |
fibrous joint | 5.28e-07 | 5 |
cartilaginous joint | 5.28e-07 | 5 |
developing mesenchymal condensation | 5.28e-07 | 5 |
pre-cartilage condensation | 5.28e-07 | 5 |
cartilaginous condensation | 5.28e-07 | 5 |
cartilage element | 5.28e-07 | 5 |
post-cranial axial skeletal system | 5.28e-07 | 5 |
vertebral column | 5.28e-07 | 5 |
intervertebral disk | 5.28e-07 | 5 |
intervertebral joint | 5.28e-07 | 5 |
respiratory tract | 6.78e-07 | 54 |
nucleus pulposus | 8.27e-07 | 3 |
axial mesoderm | 8.27e-07 | 3 |
notochord | 8.27e-07 | 3 |
chordamesoderm | 8.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.06e-07 | 106 |
cell type cancer | 1.48e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.