FFCP PHASE1:Mm9::chr7:147279303..147279314,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22264|HGNC=|MCL_coexpression_id=12|UniProt=Q80XD8|association_with_transcript=8bp_to_NM_009475,uc009kgt.2_5end|description=CAGE_peak_2_at_Prap1_5end|id=chr7:147279303..147279314,+|ontology_enrichment_celltype=CL:0002563!1.22e-09!9;CL:0002251!1.22e-09!9;CL:0000239!3.31e-07!6;CL:0000677!3.31e-07!6;CL:0000212!3.31e-07!6;CL:0000584!3.31e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,4.00e-11,9;CL:0002251,4.00e-11,9;CL:0000239,3.00e-08,6;CL:0000677,3.00e-08,6;CL:0000584,3.00e-08,6;CL:0000075,7.25e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.43e-21!43;UBERON:0005409!1.90e-20!59;UBERON:0000344!2.39e-15!15;UBERON:0001242!2.64e-13!13;UBERON:0000060!2.64e-13!13;UBERON:0001262!2.64e-13!13;UBERON:0004786!2.64e-13!13;UBERON:0004923!1.72e-10!24;UBERON:0003350!1.22e-09!9;UBERON:0004808!1.22e-09!9;UBERON:0001277!1.22e-09!9;UBERON:0004119!1.62e-09!130;UBERON:0000925!1.62e-09!130;UBERON:0006595!1.62e-09!130;UBERON:0001007!7.11e-09!128;UBERON:0001555!7.11e-09!128;UBERON:0007026!7.11e-09!128;UBERON:0004921!7.90e-08!126;UBERON:0004185!7.90e-08!126;UBERON:0000485!2.50e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.38e-30,31;UBERON:0005409,7.71e-27,47;UBERON:0000344,6.98e-18,15;UBERON:0001242,1.84e-15,13;UBERON:0001262,1.84e-15,13;UBERON:0004786,1.84e-15,13;UBERON:0004923,1.08e-12,24;UBERON:0003350,4.00e-11,9;UBERON:0004808,4.00e-11,9;UBERON:0001277,4.00e-11,9;UBERON:0000485,1.30e-08,11;UBERON:0004119,8.38e-07,118;UBERON:0000925,8.38e-07,118;UBERON:0006595,8.38e-07,118|phase1_expression=0,732.848356042658,866.318551797677,888.034924396853,844.009304959595,109.28940601464,141.569260200889,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,682.367683213879,691.898391698585,923.364998296953,654.758234161794,424.04738592583,440.474286299875,353.094211793663,120.177936775175,0,0,0,246.96813488734,274.287164841512,203.556848193582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0097706784715,0,0,0,0,0,0,0,0,0,0,101.966204589121,0,0,0,0,0,0,0,4.02133092254962,3.70792451601561,0,0,0,0,0,41.0061874679869,0,0,542.590785263048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,2763.95311965947,399.584806228615,0.213288250535234,0.464473343720877,25.1291549578082,94.3878895237243,163.44786222598,290.854982326103,576.552809776582,524.072073931803,323.971084143547,325.492788259323,267.880655701671,429.635677336718,471.613224826583,663.93700503006,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0.482354319504834,1.01850340712568,0.287696137450811,0,0,0,0.372140947668503,0,0,0.538192240565737,0.482443521363367,0,0,0,0.678980343100753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0,4.28922319728592,0,0,2.11626489875326,0,0.295301892880773,0.307435147943927,103.888173853625,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86679270159276,1.27099242518292,0,0,0,0,0,0,406.615767098642,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,3.25311147402958,25.9212817972323,11.2907679847813,47.6030388966667,2.96701562046606,3.2234847732881,0,7.2584385043404,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0.38983152295901,0,0.116876902181569,0,0,0,0,0.19318959403219,391.693326266617,20.8792851664682,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45864030240976,0.628839487883947,2.5738091183002,11.556829845684,10.3017528619447,14.7622836412235,11.1186773176071,11.9135270948413,10.7517014590063,9.73871677686777,9.15559679389631,10.395819880966,9.0495801343784,9.27074607558844,8.48800570040302,14.4230065281157,11.7759136107518,13.3719008430312,10.4710725634009,9.77588378784016,11.046327664057,12.4224382148236,9.98452373121783,11.3415343181119,12.8904158604543,10.4569167661314,14.5896990631012,8.54172130494054,8.17587203717177,13.9138554677694,11.4653262477615,9.83823716003821,0,14.5037597236153,18.0491685400571,0,0,0|short_description=p2@Prap1}} | ||
|EntrezGene=22264 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q80XD8 | |||
|association_with_transcript=8bp_to_NM_009475,uc009kgt.2_5end | |||
|description=CAGE_peak_2_at_Prap1_5end | |||
|id=chr7:147279303..147279314,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.22e-09!9;CL:0002251!1.22e-09!9;CL:0000239!3.31e-07!6;CL:0000677!3.31e-07!6;CL:0000212!3.31e-07!6;CL:0000584!3.31e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.00e-11,9;CL:0002251,4.00e-11,9;CL:0000239,3.00e-08,6;CL:0000677,3.00e-08,6;CL:0000584,3.00e-08,6;CL:0000075,7.25e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.43e-21!43;UBERON:0005409!1.90e-20!59;UBERON:0000344!2.39e-15!15;UBERON:0001242!2.64e-13!13;UBERON:0000060!2.64e-13!13;UBERON:0001262!2.64e-13!13;UBERON:0004786!2.64e-13!13;UBERON:0004923!1.72e-10!24;UBERON:0003350!1.22e-09!9;UBERON:0004808!1.22e-09!9;UBERON:0001277!1.22e-09!9;UBERON:0004119!1.62e-09!130;UBERON:0000925!1.62e-09!130;UBERON:0006595!1.62e-09!130;UBERON:0001007!7.11e-09!128;UBERON:0001555!7.11e-09!128;UBERON:0007026!7.11e-09!128;UBERON:0004921!7.90e-08!126;UBERON:0004185!7.90e-08!126;UBERON:0000485!2.50e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.38e-30,31;UBERON:0005409,7.71e-27,47;UBERON:0000344,6.98e-18,15;UBERON:0001242,1.84e-15,13;UBERON:0001262,1.84e-15,13;UBERON:0004786,1.84e-15,13;UBERON:0004923,1.08e-12,24;UBERON:0003350,4.00e-11,9;UBERON:0004808,4.00e-11,9;UBERON:0001277,4.00e-11,9;UBERON:0000485,1.30e-08,11;UBERON:0004119,8.38e-07,118;UBERON:0000925,8.38e-07,118;UBERON:0006595,8.38e-07,118 | |||
|phase1_expression=0,732.848356042658,866.318551797677,888.034924396853,844.009304959595,109.28940601464,141.569260200889,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,682.367683213879,691.898391698585,923.364998296953,654.758234161794,424.04738592583,440.474286299875,353.094211793663,120.177936775175,0,0,0,246.96813488734,274.287164841512,203.556848193582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0097706784715,0,0,0,0,0,0,0,0,0,0,101.966204589121,0,0,0,0,0,0,0,4.02133092254962,3.70792451601561,0,0,0,0,0,41.0061874679869,0,0,542.590785263048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,2763.95311965947,399.584806228615,0.213288250535234,0.464473343720877,25.1291549578082,94.3878895237243,163.44786222598,290.854982326103,576.552809776582,524.072073931803,323.971084143547,325.492788259323,267.880655701671,429.635677336718,471.613224826583,663.93700503006,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0.482354319504834,1.01850340712568,0.287696137450811,0,0,0,0.372140947668503,0,0,0.538192240565737,0.482443521363367,0,0,0,0.678980343100753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0,4.28922319728592,0,0,2.11626489875326,0,0.295301892880773,0.307435147943927,103.888173853625,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86679270159276,1.27099242518292,0,0,0,0,0,0,406.615767098642,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,3.25311147402958,25.9212817972323,11.2907679847813,47.6030388966667,2.96701562046606,3.2234847732881,0,7.2584385043404,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0.38983152295901,0,0.116876902181569,0,0,0,0,0.19318959403219,391.693326266617,20.8792851664682,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45864030240976,0.628839487883947,2.5738091183002,11.556829845684,10.3017528619447,14.7622836412235,11.1186773176071,11.9135270948413,10.7517014590063,9.73871677686777,9.15559679389631,10.395819880966,9.0495801343784,9.27074607558844,8.48800570040302,14.4230065281157,11.7759136107518,13.3719008430312,10.4710725634009,9.77588378784016,11.046327664057,12.4224382148236,9.98452373121783,11.3415343181119,12.8904158604543,10.4569167661314,14.5896990631012,8.54172130494054,8.17587203717177,13.9138554677694,11.4653262477615,9.83823716003821,0,14.5037597236153,18.0491685400571,0,0,0 | |||
|short_description=p2@Prap1 | |||
}} |
Revision as of 12:13, 14 September 2013
Short description: | p2@Prap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 8bp_to_NM_009475, uc009kgt.2_5end |
EntrezGene: | Prap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.00e-11 | 9 |
epithelial cell of alimentary canal | 4.00e-11 | 9 |
brush border epithelial cell | 3.00e-08 | 6 |
gut absorptive cell | 3.00e-08 | 6 |
enterocyte | 3.00e-08 | 6 |
columnar/cuboidal epithelial cell | 7.25e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.38e-30 | 31 |
gastrointestinal system | 7.71e-27 | 47 |
mucosa | 6.98e-18 | 15 |
intestinal mucosa | 1.84e-15 | 13 |
wall of intestine | 1.84e-15 | 13 |
gastrointestinal system mucosa | 1.84e-15 | 13 |
organ component layer | 1.08e-12 | 24 |
epithelium of mucosa | 4.00e-11 | 9 |
gastrointestinal system epithelium | 4.00e-11 | 9 |
intestinal epithelium | 4.00e-11 | 9 |
simple columnar epithelium | 1.30e-08 | 11 |
endoderm-derived structure | 8.38e-07 | 118 |
endoderm | 8.38e-07 | 118 |
presumptive endoderm | 8.38e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.