FFCP PHASE1:Mm9::chr7:147129867..147129874,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=22286|HGNC=|MCL_coexpression_id=68|UniProt=Q6J1H4|association_with_transcript=179bp_to_ENSMUST00000168457_5end|description=CAGE_peak_5_at_Utf1_5end|id=chr7:147129867..147129874,+|ontology_enrichment_celltype=CL:0000791!2.12e-32!9;CL:0000789!2.12e-32!9;CL:0002420!2.12e-32!9;CL:0002419!2.12e-32!9;CL:0000790!2.12e-32!9;CL:0000084!1.64e-26!11;CL:0000827!1.64e-26!11;CL:0000624!1.55e-25!8;CL:0000838!2.66e-24!12;CL:0000542!1.98e-22!13;CL:0000051!1.98e-22!13;CL:0000893!2.39e-22!6;CL:0002489!2.39e-22!6;CL:0000898!2.39e-22!6;CL:0000809!2.39e-22!6;CL:0000810!2.39e-22!6;CL:0000895!2.39e-22!6;CL:0000808!2.39e-22!6;CL:0000894!2.39e-22!6;CL:0000806!2.39e-22!6;CL:0000807!2.39e-22!6;CL:0000805!2.39e-22!6;CL:0002425!2.39e-22!6;CL:0002436!2.39e-22!6;CL:0002427!2.39e-22!6;CL:0002428!2.39e-22!6;CL:0002429!2.39e-22!6;CL:0002433!2.39e-22!6;CL:0002431!2.39e-22!6;CL:0002432!2.39e-22!6;CL:0000738!3.89e-17!17;CL:0002087!3.89e-17!17;CL:0000988!4.61e-12!32;CL:0002032!4.61e-12!32;CL:0000037!4.61e-12!32;CL:0000566!4.61e-12!32;CL:0000837!4.61e-12!32;CL:0002031!1.31e-11!25;CL:0000625!1.73e-09!1;CL:0000815!4.39e-09!1;CL:0000792!4.39e-09!1;CL:0002320!2.86e-08!46;CL:0000134!2.86e-08!46;CL:0000219!5.61e-07!54|ontology_enrichment_celltype_v019_2=CL:0000893,6.66e-30,6;CL:0002489,6.66e-30,6;CL:0000898,6.66e-30,6;CL:0000809,6.66e-30,6;CL:0000810,6.66e-30,6;CL:0000895,6.66e-30,6;CL:0000808,6.66e-30,6;CL:0000894,6.66e-30,6;CL:0000806,6.66e-30,6;CL:0000807,6.66e-30,6;CL:0000805,6.66e-30,6;CL:0002425,6.66e-30,6;CL:0002436,6.66e-30,6;CL:0002427,6.66e-30,6;CL:0002428,6.66e-30,6;CL:0002429,6.66e-30,6;CL:0002433,6.66e-30,6;CL:0002431,6.66e-30,6;CL:0002432,6.66e-30,6;CL:0000624,8.41e-23,8;CL:0000791,1.98e-20,9;CL:0000789,1.98e-20,9;CL:0002420,1.98e-20,9;CL:0002419,1.98e-20,9;CL:0000790,1.98e-20,9;CL:0000084,5.67e-17,11;CL:0000827,5.67e-17,11;CL:0000838,1.13e-15,12;CL:0000542,1.42e-14,13;CL:0000051,1.42e-14,13;CL:0000738,1.86e-11,17;CL:0002087,1.86e-11,17;CL:0002031,3.41e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.30e-12!23;UBERON:0000974!1.30e-12!23;UBERON:0004807!1.30e-12!23;UBERON:0005058!1.30e-12!23;UBERON:0003351!1.30e-12!23;UBERON:0009113!1.30e-12!23;UBERON:0003295!1.30e-12!23;UBERON:0009722!1.30e-12!23;UBERON:0005562!1.30e-12!23;UBERON:0007690!1.30e-12!23;UBERON:0006562!4.44e-12!24;UBERON:0003408!4.44e-12!24;UBERON:0001557!4.44e-12!24;UBERON:0001042!4.44e-12!24;UBERON:0008814!4.44e-12!24;UBERON:0009145!4.44e-12!24;UBERON:0000072!1.02e-10!27;UBERON:0004177!5.78e-10!29;UBERON:0002384!2.86e-08!46;UBERON:0000063!3.23e-08!35;UBERON:0000065!5.62e-07!41;UBERON:0001004!8.37e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.45e-09,23;UBERON:0000974,8.45e-09,23;UBERON:0004807,8.45e-09,23;UBERON:0005058,8.45e-09,23;UBERON:0003351,8.45e-09,23;UBERON:0009113,8.45e-09,23;UBERON:0003295,8.45e-09,23;UBERON:0009722,8.45e-09,23;UBERON:0005562,8.45e-09,23;UBERON:0007690,8.45e-09,23;UBERON:0006562,1.75e-08,24;UBERON:0003408,1.75e-08,24;UBERON:0001557,1.75e-08,24;UBERON:0001042,1.75e-08,24;UBERON:0008814,1.75e-08,24;UBERON:0009145,1.75e-08,24;UBERON:0000072,1.12e-07,27;UBERON:0004177,3.14e-07,29;UBERON:0005057,3.14e-07,29|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.563154888606667,0.234064526321993,1.71217968225505,1.27635454392538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Utf1}} | ||
|EntrezGene=22286 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|UniProt=Q6J1H4 | |||
|association_with_transcript=179bp_to_ENSMUST00000168457_5end | |||
|description=CAGE_peak_5_at_Utf1_5end | |||
|id=chr7:147129867..147129874,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.12e-32!9;CL:0000789!2.12e-32!9;CL:0002420!2.12e-32!9;CL:0002419!2.12e-32!9;CL:0000790!2.12e-32!9;CL:0000084!1.64e-26!11;CL:0000827!1.64e-26!11;CL:0000624!1.55e-25!8;CL:0000838!2.66e-24!12;CL:0000542!1.98e-22!13;CL:0000051!1.98e-22!13;CL:0000893!2.39e-22!6;CL:0002489!2.39e-22!6;CL:0000898!2.39e-22!6;CL:0000809!2.39e-22!6;CL:0000810!2.39e-22!6;CL:0000895!2.39e-22!6;CL:0000808!2.39e-22!6;CL:0000894!2.39e-22!6;CL:0000806!2.39e-22!6;CL:0000807!2.39e-22!6;CL:0000805!2.39e-22!6;CL:0002425!2.39e-22!6;CL:0002436!2.39e-22!6;CL:0002427!2.39e-22!6;CL:0002428!2.39e-22!6;CL:0002429!2.39e-22!6;CL:0002433!2.39e-22!6;CL:0002431!2.39e-22!6;CL:0002432!2.39e-22!6;CL:0000738!3.89e-17!17;CL:0002087!3.89e-17!17;CL:0000988!4.61e-12!32;CL:0002032!4.61e-12!32;CL:0000037!4.61e-12!32;CL:0000566!4.61e-12!32;CL:0000837!4.61e-12!32;CL:0002031!1.31e-11!25;CL:0000625!1.73e-09!1;CL:0000815!4.39e-09!1;CL:0000792!4.39e-09!1;CL:0002320!2.86e-08!46;CL:0000134!2.86e-08!46;CL:0000219!5.61e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,6.66e-30,6;CL:0002489,6.66e-30,6;CL:0000898,6.66e-30,6;CL:0000809,6.66e-30,6;CL:0000810,6.66e-30,6;CL:0000895,6.66e-30,6;CL:0000808,6.66e-30,6;CL:0000894,6.66e-30,6;CL:0000806,6.66e-30,6;CL:0000807,6.66e-30,6;CL:0000805,6.66e-30,6;CL:0002425,6.66e-30,6;CL:0002436,6.66e-30,6;CL:0002427,6.66e-30,6;CL:0002428,6.66e-30,6;CL:0002429,6.66e-30,6;CL:0002433,6.66e-30,6;CL:0002431,6.66e-30,6;CL:0002432,6.66e-30,6;CL:0000624,8.41e-23,8;CL:0000791,1.98e-20,9;CL:0000789,1.98e-20,9;CL:0002420,1.98e-20,9;CL:0002419,1.98e-20,9;CL:0000790,1.98e-20,9;CL:0000084,5.67e-17,11;CL:0000827,5.67e-17,11;CL:0000838,1.13e-15,12;CL:0000542,1.42e-14,13;CL:0000051,1.42e-14,13;CL:0000738,1.86e-11,17;CL:0002087,1.86e-11,17;CL:0002031,3.41e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.30e-12!23;UBERON:0000974!1.30e-12!23;UBERON:0004807!1.30e-12!23;UBERON:0005058!1.30e-12!23;UBERON:0003351!1.30e-12!23;UBERON:0009113!1.30e-12!23;UBERON:0003295!1.30e-12!23;UBERON:0009722!1.30e-12!23;UBERON:0005562!1.30e-12!23;UBERON:0007690!1.30e-12!23;UBERON:0006562!4.44e-12!24;UBERON:0003408!4.44e-12!24;UBERON:0001557!4.44e-12!24;UBERON:0001042!4.44e-12!24;UBERON:0008814!4.44e-12!24;UBERON:0009145!4.44e-12!24;UBERON:0000072!1.02e-10!27;UBERON:0004177!5.78e-10!29;UBERON:0002384!2.86e-08!46;UBERON:0000063!3.23e-08!35;UBERON:0000065!5.62e-07!41;UBERON:0001004!8.37e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.45e-09,23;UBERON:0000974,8.45e-09,23;UBERON:0004807,8.45e-09,23;UBERON:0005058,8.45e-09,23;UBERON:0003351,8.45e-09,23;UBERON:0009113,8.45e-09,23;UBERON:0003295,8.45e-09,23;UBERON:0009722,8.45e-09,23;UBERON:0005562,8.45e-09,23;UBERON:0007690,8.45e-09,23;UBERON:0006562,1.75e-08,24;UBERON:0003408,1.75e-08,24;UBERON:0001557,1.75e-08,24;UBERON:0001042,1.75e-08,24;UBERON:0008814,1.75e-08,24;UBERON:0009145,1.75e-08,24;UBERON:0000072,1.12e-07,27;UBERON:0004177,3.14e-07,29;UBERON:0005057,3.14e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.563154888606667,0.234064526321993,1.71217968225505,1.27635454392538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Utf1 | |||
}} |
Revision as of 12:12, 14 September 2013
Short description: | p5@Utf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Utf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 179bp_to_ENSMUST00000168457_5end |
EntrezGene: | Utf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.45e-09 | 23 |
neck | 8.45e-09 | 23 |
respiratory system epithelium | 8.45e-09 | 23 |
hemolymphoid system gland | 8.45e-09 | 23 |
pharyngeal epithelium | 8.45e-09 | 23 |
thymic region | 8.45e-09 | 23 |
pharyngeal gland | 8.45e-09 | 23 |
entire pharyngeal arch endoderm | 8.45e-09 | 23 |
thymus primordium | 8.45e-09 | 23 |
early pharyngeal endoderm | 8.45e-09 | 23 |
pharynx | 1.75e-08 | 24 |
gland of gut | 1.75e-08 | 24 |
upper respiratory tract | 1.75e-08 | 24 |
chordate pharynx | 1.75e-08 | 24 |
pharyngeal arch system | 1.75e-08 | 24 |
pharyngeal region of foregut | 1.75e-08 | 24 |
segment of respiratory tract | 1.12e-07 | 27 |
hemopoietic organ | 3.14e-07 | 29 |
immune organ | 3.14e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.