FFCP PHASE1:Mm9::chr7:129329665..129329727,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26918|HGNC=|MCL_coexpression_id=306|UniProt=Q9Z2E3,Q32MS5|association_with_transcript=2bp_to_ENSMUST00000033153,NM_012016,uc009joq.1,uc009jor.1,uc012fti.1_5end|description=CAGE_peak_1_at_Ern2_5end|id=chr7:129329665..129329727,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,1.60e-07,9;CL:0002251,1.60e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!6.94e-16!59;UBERON:0000160!9.25e-13!43;UBERON:0000344!1.16e-10!15;UBERON:0001242!2.64e-09!13;UBERON:0000060!2.64e-09!13;UBERON:0001262!2.64e-09!13;UBERON:0004786!2.64e-09!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.16e-32,47;UBERON:0000160,1.12e-27,31;UBERON:0000344,3.55e-14,15;UBERON:0001242,4.58e-12,13;UBERON:0001262,4.58e-12,13;UBERON:0004786,4.58e-12,13;UBERON:0001007,2.72e-09,116;UBERON:0001555,2.72e-09,116;UBERON:0007026,2.72e-09,116;UBERON:0004119,6.21e-09,118;UBERON:0000925,6.21e-09,118;UBERON:0006595,6.21e-09,118;UBERON:0004921,3.55e-08,114;UBERON:0003350,1.60e-07,9;UBERON:0004808,1.60e-07,9;UBERON:0001277,1.60e-07,9;UBERON:0004923,2.38e-07,24|phase1_expression=0.480446541314382,2.09385244583617,0.909998478779072,1.51232105653415,1.00179145989269,38.6122325397347,43.2183385101723,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,13.5993559374396,14.6821939882989,1.14846392823004,11.1998119001359,16.5912849168135,30.9738173713889,27.4712841438325,22.8382425974964,0,0,0,2.02196133825892,3.82339684324532,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0.420649922702764,1.14260393761521,1.32521124570968,0,0.575072826109418,0,0,1.14918604276669,0.614426133024974,0.527545150920775,1.28082701043374,1.04182674111352,0,3.93933827022176,1.68078072554491,0.589257170947335,0.284743361598206,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0.281686839553361,0,0,0,0,0,0,5.36664234679582,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,72.6927868750676,0,0,26.0566196312763,0,0,0,0.748953197024114,0,0.628271760564322,0,0,0.20778804455956,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0.617427674275707,16.8513579321737,15.073682299822,0.213288250535234,0.232236671860439,3.73715637834071,7.86565746031036,10.0070119730192,15.4082757151173,14.2358718463353,7.74085087202851,16.5881237808178,18.1050389557447,13.062593836981,13.4822911298133,38.0402967779462,49.7853183135918,0,0.114248512609729,0,0,0,0,0,0.442830443938806,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0,1.11618338060241,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0.328281799490123,18.3632927076806,0.370850604021019,0,0,0,0,0,0,0,0,0,101.195085509602,0.790839983952838,11.9958485604841,24.8412283890143,32.6177741782571,39.0868989105658,43.6960482286819,56.5349637161298,61.2508904242629,34.6071978689087,0,0,0,0.165458490457098,0.777804753376191,1.29159823477731,0.168956125490778,0.117357238645754,0,0.629156066554265,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.25984164595559,0.716106782669926,0.198681354781265,0,0,0,0,0,0,0,0,10.4295976462997,0,0,0,1.35232715822533,0.187682475451182,0,0.643105137237198,0,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.666740183404846,2.06035057238894,0.64183841918363,1.51618327058278,1.2673964994512,0.943131706930381,1.31098110457835,1.28050304809739,1.7230640686684,1.42888107384922,0.579421629724277,1.15745532278223,1.64834360321323,1.61918812147837,1.02860775715625,0.887379030796687,1.43061713968393,0.581385666529314,1.03520318456864,1.35383372626682,1.09756783723664,1.05227884575137,1.62964936615034,0,1.30498519936592,0.886540341380071,0.818462086339379,0.77468420592983,1.92906610981141,0.249810577937946,2.57324769289949,1.71896843238639,1.3390183244819,0,0|short_description=p1@Ern2}} | ||
|EntrezGene=26918 | |||
|HGNC= | |||
|MCL_coexpression_id=306 | |||
|UniProt=Q9Z2E3,Q32MS5 | |||
|association_with_transcript=2bp_to_ENSMUST00000033153,NM_012016,uc009joq.1,uc009jor.1,uc012fti.1_5end | |||
|description=CAGE_peak_1_at_Ern2_5end | |||
|id=chr7:129329665..129329727,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.60e-07,9;CL:0002251,1.60e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.94e-16!59;UBERON:0000160!9.25e-13!43;UBERON:0000344!1.16e-10!15;UBERON:0001242!2.64e-09!13;UBERON:0000060!2.64e-09!13;UBERON:0001262!2.64e-09!13;UBERON:0004786!2.64e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.16e-32,47;UBERON:0000160,1.12e-27,31;UBERON:0000344,3.55e-14,15;UBERON:0001242,4.58e-12,13;UBERON:0001262,4.58e-12,13;UBERON:0004786,4.58e-12,13;UBERON:0001007,2.72e-09,116;UBERON:0001555,2.72e-09,116;UBERON:0007026,2.72e-09,116;UBERON:0004119,6.21e-09,118;UBERON:0000925,6.21e-09,118;UBERON:0006595,6.21e-09,118;UBERON:0004921,3.55e-08,114;UBERON:0003350,1.60e-07,9;UBERON:0004808,1.60e-07,9;UBERON:0001277,1.60e-07,9;UBERON:0004923,2.38e-07,24 | |||
|phase1_expression=0.480446541314382,2.09385244583617,0.909998478779072,1.51232105653415,1.00179145989269,38.6122325397347,43.2183385101723,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,13.5993559374396,14.6821939882989,1.14846392823004,11.1998119001359,16.5912849168135,30.9738173713889,27.4712841438325,22.8382425974964,0,0,0,2.02196133825892,3.82339684324532,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0.420649922702764,1.14260393761521,1.32521124570968,0,0.575072826109418,0,0,1.14918604276669,0.614426133024974,0.527545150920775,1.28082701043374,1.04182674111352,0,3.93933827022176,1.68078072554491,0.589257170947335,0.284743361598206,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0.281686839553361,0,0,0,0,0,0,5.36664234679582,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,72.6927868750676,0,0,26.0566196312763,0,0,0,0.748953197024114,0,0.628271760564322,0,0,0.20778804455956,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0.617427674275707,16.8513579321737,15.073682299822,0.213288250535234,0.232236671860439,3.73715637834071,7.86565746031036,10.0070119730192,15.4082757151173,14.2358718463353,7.74085087202851,16.5881237808178,18.1050389557447,13.062593836981,13.4822911298133,38.0402967779462,49.7853183135918,0,0.114248512609729,0,0,0,0,0,0.442830443938806,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0,1.11618338060241,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0.328281799490123,18.3632927076806,0.370850604021019,0,0,0,0,0,0,0,0,0,101.195085509602,0.790839983952838,11.9958485604841,24.8412283890143,32.6177741782571,39.0868989105658,43.6960482286819,56.5349637161298,61.2508904242629,34.6071978689087,0,0,0,0.165458490457098,0.777804753376191,1.29159823477731,0.168956125490778,0.117357238645754,0,0.629156066554265,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.25984164595559,0.716106782669926,0.198681354781265,0,0,0,0,0,0,0,0,10.4295976462997,0,0,0,1.35232715822533,0.187682475451182,0,0.643105137237198,0,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.666740183404846,2.06035057238894,0.64183841918363,1.51618327058278,1.2673964994512,0.943131706930381,1.31098110457835,1.28050304809739,1.7230640686684,1.42888107384922,0.579421629724277,1.15745532278223,1.64834360321323,1.61918812147837,1.02860775715625,0.887379030796687,1.43061713968393,0.581385666529314,1.03520318456864,1.35383372626682,1.09756783723664,1.05227884575137,1.62964936615034,0,1.30498519936592,0.886540341380071,0.818462086339379,0.77468420592983,1.92906610981141,0.249810577937946,2.57324769289949,1.71896843238639,1.3390183244819,0,0 | |||
|short_description=p1@Ern2 | |||
}} |
Revision as of 11:40, 14 September 2013
Short description: | p1@Ern2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ern2_5end |
Coexpression cluster: | MCL_coexpression_mm9:306 |
Association with transcript: | 2bp_to_ENSMUST00000033153, NM_012016, uc009joq.1, uc009jor.1, uc012fti.1_5end |
EntrezGene: | Ern2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.60e-07 | 9 |
epithelial cell of alimentary canal | 1.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.16e-32 | 47 |
intestine | 1.12e-27 | 31 |
mucosa | 3.55e-14 | 15 |
intestinal mucosa | 4.58e-12 | 13 |
wall of intestine | 4.58e-12 | 13 |
gastrointestinal system mucosa | 4.58e-12 | 13 |
digestive system | 2.72e-09 | 116 |
digestive tract | 2.72e-09 | 116 |
primitive gut | 2.72e-09 | 116 |
endoderm-derived structure | 6.21e-09 | 118 |
endoderm | 6.21e-09 | 118 |
presumptive endoderm | 6.21e-09 | 118 |
subdivision of digestive tract | 3.55e-08 | 114 |
epithelium of mucosa | 1.60e-07 | 9 |
gastrointestinal system epithelium | 1.60e-07 | 9 |
intestinal epithelium | 1.60e-07 | 9 |
organ component layer | 2.38e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.