FFCP PHASE1:Hg19::chrX:147062844..147062871,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=158521|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26372|TSSclassifier=S|UniProt=Q8N0W7|association_with_transcript=0bp_to_ENST00000370467,NM_152578,uc004fcm.2_5end|coexpression_cluster_id=C2268|description=CAGE_peak_1_at_FMR1NB_5end|id=chrX:147062844..147062871,+|ontology_enrichment_celltype=CL:1000415!6.07e-07!2;CL:0000054!8.52e-07!2;CL:0000137!8.52e-07!2;CL:0000092!8.52e-07!2|ontology_enrichment_celltype_v019=CL:1000415;1.22e-09;2!CL:0000054;1.64e-09;2!CL:0000137;1.64e-09;2!CL:0000092;1.64e-09;2!CL:0000322;6.32e-07;3|ontology_enrichment_celltype_v019_2=CL:1000415,1.22e-09,2;CL:0000054,2.02e-09,2;CL:0000137,2.02e-09,2;CL:0000092,2.02e-09,2;CL:0000322,6.50e-07,3|ontology_enrichment_development_v019=UBERON:0009117;1.15e-07;10!UBERON:0005564;1.15e-07;10|ontology_enrichment_disease=DOID:1036!3.69e-34!8;DOID:2531!6.78e-10!51;DOID:0060083!6.78e-10!51;DOID:1240!9.36e-10!39;DOID:8692!8.52e-09!31;DOID:201!3.25e-08!6;DOID:0060100!3.25e-08!6;DOID:3910!5.11e-07!2;DOID:200!8.52e-07!2;DOID:4305!8.52e-07!2|ontology_enrichment_disease_v019=DOID:1036;5.24e-19;8!DOID:3910;9.06e-10;2!DOID:200;1.64e-09;2!DOID:4305;1.64e-09;2|ontology_enrichment_disease_v019_2=DOID:1036,4.49e-19,8;DOID:3910,9.46e-10,2;DOID:200,2.02e-09,2;DOID:4305,2.02e-09,2|ontology_enrichment_uberon=UBERON:0000473!3.48e-13!8;UBERON:0001282!7.03e-13!1;UBERON:0009842!7.03e-13!1;UBERON:0003704!7.03e-13!1;UBERON:0001171!7.03e-13!1;UBERON:0001172!7.03e-13!1;UBERON:0003135!9.69e-10!11;UBERON:0002294!1.96e-07!7;UBERON:0001173!1.96e-07!7;UBERON:0004912!1.96e-07!7;UBERON:0004903!5.11e-07!2;UBERON:0002173!5.11e-07!2;UBERON:0002186!5.11e-07!2|ontology_enrichment_uberon_v019=UBERON:0001282;2.66e-18;1!UBERON:0009842;2.66e-18;1!UBERON:0003704;2.66e-18;1!UBERON:0001171;2.66e-18;1!UBERON:0001172;2.66e-18;1!UBERON:0002294;1.46e-10;7!UBERON:0001173;1.46e-10;7!UBERON:0004903;9.06e-10;2!UBERON:0002173;9.06e-10;2!UBERON:0002186;9.06e-10;2!UBERON:0000473;2.30e-09;8!UBERON:0000058;1.04e-07;10!UBERON:0003135;4.78e-07;11!UBERON:0001280;5.80e-07;3!UBERON:0004647;5.80e-07;3!UBERON:0004821;6.32e-07;3!UBERON:0007499;6.32e-07;3!UBERON:0003215;6.32e-07;3!UBERON:0010368;6.32e-07;3!UBERON:0009911;6.32e-07;3!UBERON:0002299;6.32e-07;3!UBERON:0006524;6.32e-07;3!UBERON:0008874;6.32e-07;3!UBERON:0002169;6.32e-07;3!UBERON:0004894;6.32e-07;3!UBERON:0002110;7.70e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.66e-18,1;UBERON:0009842,2.66e-18,1;UBERON:0003704,2.66e-18,1;UBERON:0001171,2.66e-18,1;UBERON:0001172,2.66e-18,1;UBERON:0004903,9.46e-10,2;UBERON:0002173,9.46e-10,2;UBERON:0002186,9.46e-10,2;UBERON:0000473,2.25e-09,8;UBERON:0002294,2.05e-08,9;UBERON:0001173,2.05e-08,9;UBERON:0004912,2.05e-08,9;UBERON:0003135,4.71e-07,11;UBERON:0001280,5.80e-07,3;UBERON:0004647,5.80e-07,3;UBERON:0005171,5.80e-07,3;UBERON:0004821,6.50e-07,3;UBERON:0003215,6.50e-07,3;UBERON:0010368,6.50e-07,3;UBERON:0009911,6.50e-07,3;UBERON:0002299,6.50e-07,3;UBERON:0006524,6.50e-07,3;UBERON:0008874,6.50e-07,3;UBERON:0002169,6.50e-07,3;UBERON:0004894,6.50e-07,3;UBERON:0002110,7.70e-07,3;UBERON:0006242,7.70e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.8889202000773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4764088327898,0,0,0,0,0,0,0,0,0,0,0,0,0,30.8782971345373,0,0,0,0,0,0,0,0,0,1.35357396370308,1.76456280885966,1.34257269580674,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48492342779755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,1.18566979138767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=158521 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26372 | |||
|TSSclassifier=S | |||
|UniProt=Q8N0W7 | |||
|association_with_transcript=0bp_to_ENST00000370467,NM_152578,uc004fcm.2_5end | |||
|coexpression_cluster_id=C2268 | |||
|description=CAGE_peak_1_at_FMR1NB_5end | |||
|id=chrX:147062844..147062871,+ | |||
|ontology_enrichment_celltype=CL:1000415!6.07e-07!2;CL:0000054!8.52e-07!2;CL:0000137!8.52e-07!2;CL:0000092!8.52e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.22e-09;2!CL:0000054;1.64e-09;2!CL:0000137;1.64e-09;2!CL:0000092;1.64e-09;2!CL:0000322;6.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.22e-09,2;CL:0000054,2.02e-09,2;CL:0000137,2.02e-09,2;CL:0000092,2.02e-09,2;CL:0000322,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.15e-07;10!UBERON:0005564;1.15e-07;10 | |||
|ontology_enrichment_disease=DOID:1036!3.69e-34!8;DOID:2531!6.78e-10!51;DOID:0060083!6.78e-10!51;DOID:1240!9.36e-10!39;DOID:8692!8.52e-09!31;DOID:201!3.25e-08!6;DOID:0060100!3.25e-08!6;DOID:3910!5.11e-07!2;DOID:200!8.52e-07!2;DOID:4305!8.52e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.24e-19;8!DOID:3910;9.06e-10;2!DOID:200;1.64e-09;2!DOID:4305;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.49e-19,8;DOID:3910,9.46e-10,2;DOID:200,2.02e-09,2;DOID:4305,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.48e-13!8;UBERON:0001282!7.03e-13!1;UBERON:0009842!7.03e-13!1;UBERON:0003704!7.03e-13!1;UBERON:0001171!7.03e-13!1;UBERON:0001172!7.03e-13!1;UBERON:0003135!9.69e-10!11;UBERON:0002294!1.96e-07!7;UBERON:0001173!1.96e-07!7;UBERON:0004912!1.96e-07!7;UBERON:0004903!5.11e-07!2;UBERON:0002173!5.11e-07!2;UBERON:0002186!5.11e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.66e-18;1!UBERON:0009842;2.66e-18;1!UBERON:0003704;2.66e-18;1!UBERON:0001171;2.66e-18;1!UBERON:0001172;2.66e-18;1!UBERON:0002294;1.46e-10;7!UBERON:0001173;1.46e-10;7!UBERON:0004903;9.06e-10;2!UBERON:0002173;9.06e-10;2!UBERON:0002186;9.06e-10;2!UBERON:0000473;2.30e-09;8!UBERON:0000058;1.04e-07;10!UBERON:0003135;4.78e-07;11!UBERON:0001280;5.80e-07;3!UBERON:0004647;5.80e-07;3!UBERON:0004821;6.32e-07;3!UBERON:0007499;6.32e-07;3!UBERON:0003215;6.32e-07;3!UBERON:0010368;6.32e-07;3!UBERON:0009911;6.32e-07;3!UBERON:0002299;6.32e-07;3!UBERON:0006524;6.32e-07;3!UBERON:0008874;6.32e-07;3!UBERON:0002169;6.32e-07;3!UBERON:0004894;6.32e-07;3!UBERON:0002110;7.70e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.66e-18,1;UBERON:0009842,2.66e-18,1;UBERON:0003704,2.66e-18,1;UBERON:0001171,2.66e-18,1;UBERON:0001172,2.66e-18,1;UBERON:0004903,9.46e-10,2;UBERON:0002173,9.46e-10,2;UBERON:0002186,9.46e-10,2;UBERON:0000473,2.25e-09,8;UBERON:0002294,2.05e-08,9;UBERON:0001173,2.05e-08,9;UBERON:0004912,2.05e-08,9;UBERON:0003135,4.71e-07,11;UBERON:0001280,5.80e-07,3;UBERON:0004647,5.80e-07,3;UBERON:0005171,5.80e-07,3;UBERON:0004821,6.50e-07,3;UBERON:0003215,6.50e-07,3;UBERON:0010368,6.50e-07,3;UBERON:0009911,6.50e-07,3;UBERON:0002299,6.50e-07,3;UBERON:0006524,6.50e-07,3;UBERON:0008874,6.50e-07,3;UBERON:0002169,6.50e-07,3;UBERON:0004894,6.50e-07,3;UBERON:0002110,7.70e-07,3;UBERON:0006242,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.8889202000773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4764088327898,0,0,0,0,0,0,0,0,0,0,0,0,0,30.8782971345373,0,0,0,0,0,0,0,0,0,1.35357396370308,1.76456280885966,1.34257269580674,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48492342779755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,1.18566979138767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,12.1245917149183,28.9401260568673,0,0,0,0,0,0,1.56984607612859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@FMR1NB | |||
}} |
Revision as of 11:07, 14 September 2013
Short description: | p1@FMR1NB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FMR1NB_5end |
Coexpression cluster: | C2268_cholangiocellular_testis_bronchioalveolar_gall_squamous_chronic_gastric |
Association with transcript: | 0bp_to_ENST00000370467, NM_152578, uc004fcm.2_5end |
EntrezGene: | FMR1NB |
HGNC: | 26372 |
UniProt: | Q8N0W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.22e-09 | 2 |
bone matrix secreting cell | 2.02e-09 | 2 |
osteocyte | 2.02e-09 | 2 |
osteoclast | 2.02e-09 | 2 |
pneumocyte | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.66e-18 | 1 |
acinus | 2.66e-18 | 1 |
intrahepatic bile duct | 2.66e-18 | 1 |
portal lobule | 2.66e-18 | 1 |
hepatic acinus | 2.66e-18 | 1 |
bronchoalveolar duct junction | 9.46e-10 | 2 |
alveolar duct | 9.46e-10 | 2 |
bronchiole | 9.46e-10 | 2 |
testis | 2.25e-09 | 8 |
biliary system | 2.05e-08 | 9 |
biliary tree | 2.05e-08 | 9 |
biliary bud | 2.05e-08 | 9 |
male reproductive organ | 4.71e-07 | 11 |
liver parenchyma | 5.80e-07 | 3 |
liver lobule | 5.80e-07 | 3 |
hepatic duct | 5.80e-07 | 3 |
pulmonary alveolus epithelium | 6.50e-07 | 3 |
alveolus | 6.50e-07 | 3 |
pulmonary lobule | 6.50e-07 | 3 |
lobule | 6.50e-07 | 3 |
alveolus of lung | 6.50e-07 | 3 |
alveolar system | 6.50e-07 | 3 |
pulmonary acinus | 6.50e-07 | 3 |
alveolar sac | 6.50e-07 | 3 |
alveolar wall | 6.50e-07 | 3 |
gallbladder | 7.70e-07 | 3 |
gall bladder primordium | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.49e-19 | 8 |
lung adenocarcinoma | 9.46e-10 | 2 |
giant cell tumor | 2.02e-09 | 2 |
bone giant cell tumor | 2.02e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.