FFCP PHASE1:Hg19::chrX:100129340..100129353,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27035|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7889|TSSclassifier=S|UniProt=E9PC60,Q5H9D4,Q9Y5S8|association_with_transcript=-6bp_to_ENST00000372957,ENST00000372961,ENST00000372966,NM_007052,NM_013955,uc004egj.2,uc004egl.3,uc010nne.2_5end|coexpression_cluster_id=C201|description=CAGE_peak_2_at_NOX1_5end|id=chrX:100129340..100129353,-|ontology_enrichment_celltype=CL:0000077!1.09e-16!19;CL:0002563!7.61e-08!4|ontology_enrichment_celltype_v019=CL:0002563;4.87e-16;4!CL:0002097;4.70e-09;2!CL:0002253;7.21e-09;2!CL:0000077;7.36e-08;19|ontology_enrichment_celltype_v019_2=CL:0002563,3.87e-16,4;CL:0002097,5.08e-09,2;CL:0002253,5.94e-09,2;CL:0000077,7.81e-08,19|ontology_enrichment_development_v019=UBERON:0001045;2.08e-16;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000059!1.60e-22!11;UBERON:0001155!2.09e-19!9;UBERON:0000160!1.87e-18!27;UBERON:0005409!4.95e-14!35;UBERON:0004907!4.02e-13!5;UBERON:0004921!4.95e-10!129;UBERON:0004185!4.95e-10!129;UBERON:0006947!5.24e-10!3;UBERON:0004054!5.24e-10!3;UBERON:0001046!7.19e-09!19;UBERON:0001154!2.90e-08!1;UBERON:0001153!2.90e-08!1;UBERON:0001000!3.58e-08!1;UBERON:0005352!3.58e-08!1;UBERON:0000998!4.40e-08!1;UBERON:0006868!4.40e-08!1;UBERON:0001052!6.42e-08!4;UBERON:0001242!7.61e-08!4;UBERON:0001262!7.61e-08!4;UBERON:0004786!7.61e-08!4;UBERON:0004808!7.61e-08!4;UBERON:0001277!7.61e-08!4;UBERON:0001007!7.66e-08!155;UBERON:0001555!7.66e-08!155;UBERON:0007026!7.66e-08!155;UBERON:0005904!1.03e-07!4;UBERON:0004119!6.06e-07!169;UBERON:0000925!6.06e-07!169;UBERON:0006595!6.06e-07!169|ontology_enrichment_uberon_v019=UBERON:0000059;6.96e-50;11!UBERON:0001155;1.39e-42;9!UBERON:0000160;3.81e-41;17!UBERON:0005409;3.76e-32;22!UBERON:0004907;6.99e-28;5!UBERON:0004921;5.00e-22;33!UBERON:0001154;2.08e-16;1!UBERON:0001000;2.08e-16;1!UBERON:0001153;2.08e-16;1!UBERON:0009854;2.08e-16;1!UBERON:0005352;2.08e-16;1!UBERON:0001052;3.19e-16;4!UBERON:0001242;4.87e-16;4!UBERON:0001262;4.87e-16;4!UBERON:0004786;4.87e-16;4!UBERON:0004808;4.87e-16;4!UBERON:0001277;4.87e-16;4!UBERON:0000485;1.41e-09;7!UBERON:0003929;1.41e-09;7!UBERON:0003350;1.71e-08;8!UBERON:0001555;2.72e-08;54!UBERON:0001007;3.75e-08;81|ontology_enrichment_uberon_v019_2=UBERON:0000059,4.97e-50,11;UBERON:0001155,9.83e-43,9;UBERON:0000160,2.91e-41,17;UBERON:0005409,1.72e-28,25;UBERON:0004907,4.83e-28,5;UBERON:0001154,1.65e-16,1;UBERON:0001153,1.65e-16,1;UBERON:0001045,1.65e-16,1;UBERON:0001000,2.63e-16,1;UBERON:0005352,2.63e-16,1;UBERON:0001052,2.64e-16,4;UBERON:0001242,3.87e-16,4;UBERON:0001262,3.87e-16,4;UBERON:0004786,3.87e-16,4;UBERON:0004808,3.87e-16,4;UBERON:0001277,3.87e-16,4;UBERON:0001046,3.48e-13,19;UBERON:0004921,1.25e-09,118;UBERON:0003350,1.53e-08,8;UBERON:0000485,1.09e-07,9;UBERON:0001007,1.10e-07,145;UBERON:0001555,1.10e-07,145;UBERON:0007026,1.10e-07,145;UBERON:0004119,6.96e-07,160;UBERON:0000925,6.96e-07,160;UBERON:0006595,6.96e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,3.69900067373611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97894300007517,0,22.8910244148056,7.69580811179051,16.4978139132079,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43106546199881,0.782982875895635,0,0,0,0,0.926404341482917,0.219284049578707,0,1.15748422962549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7889 | |||
|TSSclassifier=S | |||
|UniProt=E9PC60,Q5H9D4,Q9Y5S8 | |||
|association_with_transcript=-6bp_to_ENST00000372957,ENST00000372961,ENST00000372966,NM_007052,NM_013955,uc004egj.2,uc004egl.3,uc010nne.2_5end | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_2_at_NOX1_5end | |||
|id=chrX:100129340..100129353,- | |||
|ontology_enrichment_celltype=CL:0000077!1.09e-16!19;CL:0002563!7.61e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;4.87e-16;4!CL:0002097;4.70e-09;2!CL:0002253;7.21e-09;2!CL:0000077;7.36e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.87e-16,4;CL:0002097,5.08e-09,2;CL:0002253,5.94e-09,2;CL:0000077,7.81e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.08e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!1.60e-22!11;UBERON:0001155!2.09e-19!9;UBERON:0000160!1.87e-18!27;UBERON:0005409!4.95e-14!35;UBERON:0004907!4.02e-13!5;UBERON:0004921!4.95e-10!129;UBERON:0004185!4.95e-10!129;UBERON:0006947!5.24e-10!3;UBERON:0004054!5.24e-10!3;UBERON:0001046!7.19e-09!19;UBERON:0001154!2.90e-08!1;UBERON:0001153!2.90e-08!1;UBERON:0001000!3.58e-08!1;UBERON:0005352!3.58e-08!1;UBERON:0000998!4.40e-08!1;UBERON:0006868!4.40e-08!1;UBERON:0001052!6.42e-08!4;UBERON:0001242!7.61e-08!4;UBERON:0001262!7.61e-08!4;UBERON:0004786!7.61e-08!4;UBERON:0004808!7.61e-08!4;UBERON:0001277!7.61e-08!4;UBERON:0001007!7.66e-08!155;UBERON:0001555!7.66e-08!155;UBERON:0007026!7.66e-08!155;UBERON:0005904!1.03e-07!4;UBERON:0004119!6.06e-07!169;UBERON:0000925!6.06e-07!169;UBERON:0006595!6.06e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;6.96e-50;11!UBERON:0001155;1.39e-42;9!UBERON:0000160;3.81e-41;17!UBERON:0005409;3.76e-32;22!UBERON:0004907;6.99e-28;5!UBERON:0004921;5.00e-22;33!UBERON:0001154;2.08e-16;1!UBERON:0001000;2.08e-16;1!UBERON:0001153;2.08e-16;1!UBERON:0009854;2.08e-16;1!UBERON:0005352;2.08e-16;1!UBERON:0001052;3.19e-16;4!UBERON:0001242;4.87e-16;4!UBERON:0001262;4.87e-16;4!UBERON:0004786;4.87e-16;4!UBERON:0004808;4.87e-16;4!UBERON:0001277;4.87e-16;4!UBERON:0000485;1.41e-09;7!UBERON:0003929;1.41e-09;7!UBERON:0003350;1.71e-08;8!UBERON:0001555;2.72e-08;54!UBERON:0001007;3.75e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,4.97e-50,11;UBERON:0001155,9.83e-43,9;UBERON:0000160,2.91e-41,17;UBERON:0005409,1.72e-28,25;UBERON:0004907,4.83e-28,5;UBERON:0001154,1.65e-16,1;UBERON:0001153,1.65e-16,1;UBERON:0001045,1.65e-16,1;UBERON:0001000,2.63e-16,1;UBERON:0005352,2.63e-16,1;UBERON:0001052,2.64e-16,4;UBERON:0001242,3.87e-16,4;UBERON:0001262,3.87e-16,4;UBERON:0004786,3.87e-16,4;UBERON:0004808,3.87e-16,4;UBERON:0001277,3.87e-16,4;UBERON:0001046,3.48e-13,19;UBERON:0004921,1.25e-09,118;UBERON:0003350,1.53e-08,8;UBERON:0000485,1.09e-07,9;UBERON:0001007,1.10e-07,145;UBERON:0001555,1.10e-07,145;UBERON:0007026,1.10e-07,145;UBERON:0004119,6.96e-07,160;UBERON:0000925,6.96e-07,160;UBERON:0006595,6.96e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,3.69900067373611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97894300007517,0,22.8910244148056,7.69580811179051,16.4978139132079,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43106546199881,0.782982875895635,0,0,0,0,0.926404341482917,0.219284049578707,0,1.15748422962549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@NOX1 | |||
}} |
Revision as of 10:06, 14 September 2013
Short description: | p2@NOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NOX1_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | -6bp_to_ENST00000372957, ENST00000372961, ENST00000372966, NM_007052, NM_013955, uc004egj.2, uc004egl.3, uc010nne.2_5end |
EntrezGene: | NOX1 |
HGNC: | 7889 |
UniProt: | E9PC60Q5H9D4Q9Y5S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.87e-16 | 4 |
cortical cell of adrenal gland | 5.08e-09 | 2 |
epithelial cell of large intestine | 5.94e-09 | 2 |
mesothelial cell | 7.81e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
large intestine | 4.97e-50 | 11 |
colon | 9.83e-43 | 9 |
intestine | 2.91e-41 | 17 |
gastrointestinal system | 1.72e-28 | 25 |
lower digestive tract | 4.83e-28 | 5 |
vermiform appendix | 1.65e-16 | 1 |
caecum | 1.65e-16 | 1 |
midgut | 1.65e-16 | 1 |
vas deferens | 2.63e-16 | 1 |
spermatic cord | 2.63e-16 | 1 |
rectum | 2.64e-16 | 4 |
intestinal mucosa | 3.87e-16 | 4 |
wall of intestine | 3.87e-16 | 4 |
gastrointestinal system mucosa | 3.87e-16 | 4 |
gastrointestinal system epithelium | 3.87e-16 | 4 |
intestinal epithelium | 3.87e-16 | 4 |
hindgut | 3.48e-13 | 19 |
subdivision of digestive tract | 1.25e-09 | 118 |
epithelium of mucosa | 1.53e-08 | 8 |
simple columnar epithelium | 1.09e-07 | 9 |
digestive system | 1.10e-07 | 145 |
digestive tract | 1.10e-07 | 145 |
primitive gut | 1.10e-07 | 145 |
endoderm-derived structure | 6.96e-07 | 160 |
endoderm | 6.96e-07 | 160 |
presumptive endoderm | 6.96e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.