FFCP PHASE1:Mm9::chr6:121815837..121815866,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=73|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:121815837..121815866,+|id=chr6:121815837..121815866,+|ontology_enrichment_celltype=CL:0000181!1.75e-21!5;CL:0000417!1.75e-21!5;CL:0000668!1.75e-21!5;CL:0000412!1.75e-21!5;CL:0000182!1.75e-21!5;CL:0000414!6.58e-10!11;CL:0000057!2.05e-07!1;CL:0000632!2.05e-07!1|ontology_enrichment_celltype_v019_2=CL:0000182,3.62e-29,5;CL:0000223,1.46e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!8.00e-34!22;UBERON:0007499!8.00e-34!22;UBERON:0006925!8.00e-34!22;UBERON:0009497!8.00e-34!22;UBERON:0000015!8.00e-34!22;UBERON:0002423!8.00e-34!22;UBERON:0006235!8.00e-34!22;UBERON:0008835!8.00e-34!22;UBERON:0003894!8.00e-34!22;UBERON:0004161!8.00e-34!22;UBERON:0008836!8.00e-34!22;UBERON:0009854!2.62e-32!23;UBERON:0009856!2.62e-32!23;UBERON:0002365!1.22e-29!25;UBERON:0002330!1.22e-29!25;UBERON:0005256!3.74e-18!47;UBERON:0005172!2.32e-17!49;UBERON:0005173!2.32e-17!49;UBERON:0002417!2.32e-17!49;UBERON:0000916!2.32e-17!49;UBERON:0003914!3.07e-15!47;UBERON:0005057!5.98e-14!51;UBERON:0002368!6.09e-14!60;UBERON:0003929!7.59e-13!55;UBERON:0002530!9.10e-13!65;UBERON:0009569!1.49e-12!66;UBERON:0000949!2.15e-11!72;UBERON:0000490!1.71e-10!66;UBERON:0005911!5.55e-10!69;UBERON:0002405!8.04e-10!70;UBERON:0005177!1.94e-09!85;UBERON:0000466!1.49e-08!79;UBERON:0002100!5.40e-08!98;UBERON:0001041!3.76e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.90e-32,22;UBERON:0007499,7.90e-32,22;UBERON:0006925,7.90e-32,22;UBERON:0009497,7.90e-32,22;UBERON:0000015,7.90e-32,22;UBERON:0002423,7.90e-32,22;UBERON:0006235,7.90e-32,22;UBERON:0008835,7.90e-32,22;UBERON:0003894,7.90e-32,22;UBERON:0004161,7.90e-32,22;UBERON:0008836,7.90e-32,22;UBERON:0009854,1.96e-30,23;UBERON:0009856,1.96e-30,23;UBERON:0002365,5.58e-28,25;UBERON:0002330,5.58e-28,25;UBERON:0005256,2.16e-15,45;UBERON:0003914,1.02e-14,47;UBERON:0005172,4.22e-14,49;UBERON:0005173,4.22e-14,49;UBERON:0002417,4.22e-14,49;UBERON:0000916,4.22e-14,49;UBERON:0003929,1.63e-12,55;UBERON:0002368,1.98e-11,60;UBERON:0003104,3.10e-11,61;UBERON:0009142,3.10e-11,61;UBERON:0002530,1.64e-10,65;UBERON:0000490,2.41e-10,66;UBERON:0009569,2.41e-10,66;UBERON:0005911,7.15e-10,69;UBERON:0000949,1.94e-09,72;UBERON:0005177,1.49e-08,79;UBERON:0001041,1.94e-08,80;UBERON:0002100,1.96e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,6.79971333707751,28.6042691568043,16.2444104361917,3.13618820968135,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,1.09824565275233,0,0.372140947668503,0,1.51547326768267,1.97337154874103,6.27176577772377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:121815837..121815866,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:121815837..121815866,+ | |||
|id=chr6:121815837..121815866,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.75e-21!5;CL:0000417!1.75e-21!5;CL:0000668!1.75e-21!5;CL:0000412!1.75e-21!5;CL:0000182!1.75e-21!5;CL:0000414!6.58e-10!11;CL:0000057!2.05e-07!1;CL:0000632!2.05e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.62e-29,5;CL:0000223,1.46e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.00e-34!22;UBERON:0007499!8.00e-34!22;UBERON:0006925!8.00e-34!22;UBERON:0009497!8.00e-34!22;UBERON:0000015!8.00e-34!22;UBERON:0002423!8.00e-34!22;UBERON:0006235!8.00e-34!22;UBERON:0008835!8.00e-34!22;UBERON:0003894!8.00e-34!22;UBERON:0004161!8.00e-34!22;UBERON:0008836!8.00e-34!22;UBERON:0009854!2.62e-32!23;UBERON:0009856!2.62e-32!23;UBERON:0002365!1.22e-29!25;UBERON:0002330!1.22e-29!25;UBERON:0005256!3.74e-18!47;UBERON:0005172!2.32e-17!49;UBERON:0005173!2.32e-17!49;UBERON:0002417!2.32e-17!49;UBERON:0000916!2.32e-17!49;UBERON:0003914!3.07e-15!47;UBERON:0005057!5.98e-14!51;UBERON:0002368!6.09e-14!60;UBERON:0003929!7.59e-13!55;UBERON:0002530!9.10e-13!65;UBERON:0009569!1.49e-12!66;UBERON:0000949!2.15e-11!72;UBERON:0000490!1.71e-10!66;UBERON:0005911!5.55e-10!69;UBERON:0002405!8.04e-10!70;UBERON:0005177!1.94e-09!85;UBERON:0000466!1.49e-08!79;UBERON:0002100!5.40e-08!98;UBERON:0001041!3.76e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.90e-32,22;UBERON:0007499,7.90e-32,22;UBERON:0006925,7.90e-32,22;UBERON:0009497,7.90e-32,22;UBERON:0000015,7.90e-32,22;UBERON:0002423,7.90e-32,22;UBERON:0006235,7.90e-32,22;UBERON:0008835,7.90e-32,22;UBERON:0003894,7.90e-32,22;UBERON:0004161,7.90e-32,22;UBERON:0008836,7.90e-32,22;UBERON:0009854,1.96e-30,23;UBERON:0009856,1.96e-30,23;UBERON:0002365,5.58e-28,25;UBERON:0002330,5.58e-28,25;UBERON:0005256,2.16e-15,45;UBERON:0003914,1.02e-14,47;UBERON:0005172,4.22e-14,49;UBERON:0005173,4.22e-14,49;UBERON:0002417,4.22e-14,49;UBERON:0000916,4.22e-14,49;UBERON:0003929,1.63e-12,55;UBERON:0002368,1.98e-11,60;UBERON:0003104,3.10e-11,61;UBERON:0009142,3.10e-11,61;UBERON:0002530,1.64e-10,65;UBERON:0000490,2.41e-10,66;UBERON:0009569,2.41e-10,66;UBERON:0005911,7.15e-10,69;UBERON:0000949,1.94e-09,72;UBERON:0005177,1.49e-08,79;UBERON:0001041,1.94e-08,80;UBERON:0002100,1.96e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,6.79971333707751,28.6042691568043,16.2444104361917,3.13618820968135,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,1.09824565275233,0,0.372140947668503,0,1.51547326768267,1.97337154874103,6.27176577772377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:121815837..121815866,+ | |||
}} |
Revision as of 08:46, 14 September 2013
Short description: | p@chr6:121815837..121815866, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:121815837..121815866, + |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.62e-29 | 5 |
endodermal cell | 1.46e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 7.90e-32 | 22 |
epithelial sac | 7.90e-32 | 22 |
digestive gland | 7.90e-32 | 22 |
epithelium of foregut-midgut junction | 7.90e-32 | 22 |
anatomical boundary | 7.90e-32 | 22 |
hepatobiliary system | 7.90e-32 | 22 |
foregut-midgut junction | 7.90e-32 | 22 |
hepatic diverticulum | 7.90e-32 | 22 |
liver primordium | 7.90e-32 | 22 |
septum transversum | 7.90e-32 | 22 |
liver bud | 7.90e-32 | 22 |
digestive tract diverticulum | 1.96e-30 | 23 |
sac | 1.96e-30 | 23 |
exocrine gland | 5.58e-28 | 25 |
exocrine system | 5.58e-28 | 25 |
trunk mesenchyme | 2.16e-15 | 45 |
epithelial tube | 1.02e-14 | 47 |
abdomen element | 4.22e-14 | 49 |
abdominal segment element | 4.22e-14 | 49 |
abdominal segment of trunk | 4.22e-14 | 49 |
abdomen | 4.22e-14 | 49 |
gut epithelium | 1.63e-12 | 55 |
endocrine gland | 1.98e-11 | 60 |
mesenchyme | 3.10e-11 | 61 |
entire embryonic mesenchyme | 3.10e-11 | 61 |
gland | 1.64e-10 | 65 |
unilaminar epithelium | 2.41e-10 | 66 |
subdivision of trunk | 2.41e-10 | 66 |
endo-epithelium | 7.15e-10 | 69 |
endocrine system | 1.94e-09 | 72 |
trunk region element | 1.49e-08 | 79 |
foregut | 1.94e-08 | 80 |
trunk | 1.96e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.