FFCP PHASE1:Mm9::chr6:117857191..117857202,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=98758|HGNC=|MCL_coexpression_id=102|UniProt=Q9Z2X1|association_with_transcript=391bp_to_ENSMUST00000163168,ENSMUST00000170346,NM_001166430,NM_001166431,uc009dlf.2,uc012eqy.1_5end|description=CAGE_peak_13_at_Hnrnpf_5end|id=chr6:117857191..117857202,+|ontology_enrichment_celltype=CL:0000838!2.21e-09!12;CL:0000084!1.02e-08!11;CL:0000827!1.02e-08!11;CL:0000542!6.06e-08!13;CL:0000051!6.06e-08!13;CL:0000791!1.13e-07!9;CL:0000789!1.13e-07!9;CL:0002420!1.13e-07!9;CL:0002419!1.13e-07!9;CL:0000790!1.13e-07!9;CL:0000624!5.80e-07!8|ontology_enrichment_celltype_v019_2=CL:0000838,1.85e-17,12;CL:0000084,4.14e-16,11;CL:0000827,4.14e-16,11;CL:0000988,6.63e-16,32;CL:0002032,6.63e-16,32;CL:0000037,6.63e-16,32;CL:0000837,6.63e-16,32;CL:0000542,8.21e-16,13;CL:0000051,8.21e-16,13;CL:0000791,5.43e-14,9;CL:0000789,5.43e-14,9;CL:0002420,5.43e-14,9;CL:0002419,5.43e-14,9;CL:0000790,5.43e-14,9;CL:0000624,1.48e-12,8;CL:0002320,3.38e-12,46;CL:0000134,3.38e-12,46;CL:0000738,3.45e-11,17;CL:0002087,3.45e-11,17;CL:0002031,1.08e-10,25;CL:0000893,9.70e-10,6;CL:0002489,9.70e-10,6;CL:0000898,9.70e-10,6;CL:0000809,9.70e-10,6;CL:0000810,9.70e-10,6;CL:0000895,9.70e-10,6;CL:0000808,9.70e-10,6;CL:0000894,9.70e-10,6;CL:0000806,9.70e-10,6;CL:0000807,9.70e-10,6;CL:0000805,9.70e-10,6;CL:0002425,9.70e-10,6;CL:0002436,9.70e-10,6;CL:0002427,9.70e-10,6;CL:0002428,9.70e-10,6;CL:0002429,9.70e-10,6;CL:0002433,9.70e-10,6;CL:0002431,9.70e-10,6;CL:0002432,9.70e-10,6;CL:0000219,2.60e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.52e-09!29;UBERON:0002193!1.68e-08!48;UBERON:0000065!2.57e-08!41;UBERON:0006562!8.43e-08!24;UBERON:0001557!8.43e-08!24;UBERON:0001042!8.43e-08!24;UBERON:0008814!8.43e-08!24;UBERON:0009145!8.43e-08!24;UBERON:0001004!1.08e-07!42;UBERON:0002390!1.16e-07!45;UBERON:0003061!1.16e-07!45;UBERON:0002370!1.45e-07!23;UBERON:0000974!1.45e-07!23;UBERON:0004807!1.45e-07!23;UBERON:0005058!1.45e-07!23;UBERON:0003351!1.45e-07!23;UBERON:0009113!1.45e-07!23;UBERON:0003295!1.45e-07!23;UBERON:0009722!1.45e-07!23;UBERON:0005562!1.45e-07!23;UBERON:0007690!1.45e-07!23;UBERON:0003081!2.01e-07!88;UBERON:0000072!3.60e-07!27;UBERON:0003408!9.47e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.03e-17,48;UBERON:0002405,1.03e-17,48;UBERON:0002370,7.84e-17,23;UBERON:0000974,7.84e-17,23;UBERON:0004807,7.84e-17,23;UBERON:0005058,7.84e-17,23;UBERON:0003351,7.84e-17,23;UBERON:0009113,7.84e-17,23;UBERON:0003295,7.84e-17,23;UBERON:0009722,7.84e-17,23;UBERON:0005562,7.84e-17,23;UBERON:0007690,7.84e-17,23;UBERON:0004177,8.92e-17,29;UBERON:0005057,8.92e-17,29;UBERON:0002390,1.86e-16,45;UBERON:0003061,1.86e-16,45;UBERON:0006562,6.95e-16,24;UBERON:0003408,6.95e-16,24;UBERON:0001557,6.95e-16,24;UBERON:0001042,6.95e-16,24;UBERON:0008814,6.95e-16,24;UBERON:0009145,6.95e-16,24;UBERON:0000072,7.84e-15,27;UBERON:0000077,9.28e-13,35;UBERON:0002384,3.38e-12,46;UBERON:0000065,9.33e-11,41;UBERON:0001004,2.40e-10,42;UBERON:0007811,9.90e-09,36;UBERON:0003929,4.16e-08,55;UBERON:0000153,3.19e-07,43;UBERON:0003081,4.23e-07,87;UBERON:0005911,4.79e-07,69|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.33575854382378,1.40167584357315,8.52213934714403,8.4473233291,7.49006484230379,9.07455231595176,7.0199499915896,13.0112554747716,11.4520727168887,0.999329285446988,0.404950534779652,0,6.15151222448563,2.87940310572051,5.09267582157636,1.36069264241712,2.87943758482567,1.82839852397255,0.47997726838022,1.37645568640302,0,0,0.646413698057667,0.380046838912748,1.00812051903972,0.886922042621219,0,0,0,1.1554064790051,1.16364251750945,0.408338712524738,0,0,0,0,0,0.485510353031154,0.125896817975577,0.202753862439029,0.917733760808408,0,0,0.439372365468944,0.58328969722285,0.55994568650145,0,7.71799987865587,13.7818806982155,13.4437519656986,0.771778308107841,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.605809546665472,0.68014404096107,0.289864488701678,1.72084775396277,0,0.539703191637817,0.649776417447669,0,1.54488862144927,0.852151612890289,1.03914401841148,1.7666978725517,0.422530259330042,0,0,0,0.432982082022428,0,1.01104889002957,1.1418387971906,4.40194402200192,0,0.346970653532272,0,0.461230994512117,0.301445281105245,0.23517741427141,0.251333182659351,0.494389935468748,0.289198713839823,0.884610551949874,1.45590164952668,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,3.11519323715393,1.79970819298022,1.65191295194984,0.149790639404823,0,0.376963056338593,0,0,0.20778804455956,0,0.407357455401265,0.746441823660558,3.0326731012041,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0.680364991513279,0.384341160854549,0.187403449119458,0.258703370739016,0,0.189106080167819,0.175951124163949,0.876782929710299,0,1.0447564995665,0.823128545631774,0,3.51106593656617,3.86021860672073,3.12579849335152,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.19676423174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| ||
|EntrezGene=98758 | |||
|HGNC= | |||
|MCL_coexpression_id=102 | |||
|UniProt=Q9Z2X1 | |||
|association_with_transcript=391bp_to_ENSMUST00000163168,ENSMUST00000170346,NM_001166430,NM_001166431,uc009dlf.2,uc012eqy.1_5end | |||
|description=CAGE_peak_13_at_Hnrnpf_5end | |||
|id=chr6:117857191..117857202,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.21e-09!12;CL:0000084!1.02e-08!11;CL:0000827!1.02e-08!11;CL:0000542!6.06e-08!13;CL:0000051!6.06e-08!13;CL:0000791!1.13e-07!9;CL:0000789!1.13e-07!9;CL:0002420!1.13e-07!9;CL:0002419!1.13e-07!9;CL:0000790!1.13e-07!9;CL:0000624!5.80e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.85e-17,12;CL:0000084,4.14e-16,11;CL:0000827,4.14e-16,11;CL:0000988,6.63e-16,32;CL:0002032,6.63e-16,32;CL:0000037,6.63e-16,32;CL:0000837,6.63e-16,32;CL:0000542,8.21e-16,13;CL:0000051,8.21e-16,13;CL:0000791,5.43e-14,9;CL:0000789,5.43e-14,9;CL:0002420,5.43e-14,9;CL:0002419,5.43e-14,9;CL:0000790,5.43e-14,9;CL:0000624,1.48e-12,8;CL:0002320,3.38e-12,46;CL:0000134,3.38e-12,46;CL:0000738,3.45e-11,17;CL:0002087,3.45e-11,17;CL:0002031,1.08e-10,25;CL:0000893,9.70e-10,6;CL:0002489,9.70e-10,6;CL:0000898,9.70e-10,6;CL:0000809,9.70e-10,6;CL:0000810,9.70e-10,6;CL:0000895,9.70e-10,6;CL:0000808,9.70e-10,6;CL:0000894,9.70e-10,6;CL:0000806,9.70e-10,6;CL:0000807,9.70e-10,6;CL:0000805,9.70e-10,6;CL:0002425,9.70e-10,6;CL:0002436,9.70e-10,6;CL:0002427,9.70e-10,6;CL:0002428,9.70e-10,6;CL:0002429,9.70e-10,6;CL:0002433,9.70e-10,6;CL:0002431,9.70e-10,6;CL:0002432,9.70e-10,6;CL:0000219,2.60e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.52e-09!29;UBERON:0002193!1.68e-08!48;UBERON:0000065!2.57e-08!41;UBERON:0006562!8.43e-08!24;UBERON:0001557!8.43e-08!24;UBERON:0001042!8.43e-08!24;UBERON:0008814!8.43e-08!24;UBERON:0009145!8.43e-08!24;UBERON:0001004!1.08e-07!42;UBERON:0002390!1.16e-07!45;UBERON:0003061!1.16e-07!45;UBERON:0002370!1.45e-07!23;UBERON:0000974!1.45e-07!23;UBERON:0004807!1.45e-07!23;UBERON:0005058!1.45e-07!23;UBERON:0003351!1.45e-07!23;UBERON:0009113!1.45e-07!23;UBERON:0003295!1.45e-07!23;UBERON:0009722!1.45e-07!23;UBERON:0005562!1.45e-07!23;UBERON:0007690!1.45e-07!23;UBERON:0003081!2.01e-07!88;UBERON:0000072!3.60e-07!27;UBERON:0003408!9.47e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.03e-17,48;UBERON:0002405,1.03e-17,48;UBERON:0002370,7.84e-17,23;UBERON:0000974,7.84e-17,23;UBERON:0004807,7.84e-17,23;UBERON:0005058,7.84e-17,23;UBERON:0003351,7.84e-17,23;UBERON:0009113,7.84e-17,23;UBERON:0003295,7.84e-17,23;UBERON:0009722,7.84e-17,23;UBERON:0005562,7.84e-17,23;UBERON:0007690,7.84e-17,23;UBERON:0004177,8.92e-17,29;UBERON:0005057,8.92e-17,29;UBERON:0002390,1.86e-16,45;UBERON:0003061,1.86e-16,45;UBERON:0006562,6.95e-16,24;UBERON:0003408,6.95e-16,24;UBERON:0001557,6.95e-16,24;UBERON:0001042,6.95e-16,24;UBERON:0008814,6.95e-16,24;UBERON:0009145,6.95e-16,24;UBERON:0000072,7.84e-15,27;UBERON:0000077,9.28e-13,35;UBERON:0002384,3.38e-12,46;UBERON:0000065,9.33e-11,41;UBERON:0001004,2.40e-10,42;UBERON:0007811,9.90e-09,36;UBERON:0003929,4.16e-08,55;UBERON:0000153,3.19e-07,43;UBERON:0003081,4.23e-07,87;UBERON:0005911,4.79e-07,69 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.33575854382378,1.40167584357315,8.52213934714403,8.4473233291,7.49006484230379,9.07455231595176,7.0199499915896,13.0112554747716,11.4520727168887,0.999329285446988,0.404950534779652,0,6.15151222448563,2.87940310572051,5.09267582157636,1.36069264241712,2.87943758482567,1.82839852397255,0.47997726838022,1.37645568640302,0,0,0.646413698057667,0.380046838912748,1.00812051903972,0.886922042621219,0,0,0,1.1554064790051,1.16364251750945,0.408338712524738,0,0,0,0,0,0.485510353031154,0.125896817975577,0.202753862439029,0.917733760808408,0,0,0.439372365468944,0.58328969722285,0.55994568650145,0,7.71799987865587,13.7818806982155,13.4437519656986,0.771778308107841,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.605809546665472,0.68014404096107,0.289864488701678,1.72084775396277,0,0.539703191637817,0.649776417447669,0,1.54488862144927,0.852151612890289,1.03914401841148,1.7666978725517,0.422530259330042,0,0,0,0.432982082022428,0,1.01104889002957,1.1418387971906,4.40194402200192,0,0.346970653532272,0,0.461230994512117,0.301445281105245,0.23517741427141,0.251333182659351,0.494389935468748,0.289198713839823,0.884610551949874,1.45590164952668,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,3.11519323715393,1.79970819298022,1.65191295194984,0.149790639404823,0,0.376963056338593,0,0,0.20778804455956,0,0.407357455401265,0.746441823660558,3.0326731012041,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0.680364991513279,0.384341160854549,0.187403449119458,0.258703370739016,0,0.189106080167819,0.175951124163949,0.876782929710299,0,1.0447564995665,0.823128545631774,0,3.51106593656617,3.86021860672073,3.12579849335152,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0.934122738937356,0.493679549740441,1.14917224855367,0.56748166682099,0.438599962275997,0.439100230582101,0.536825675041487,0,0,0,1.32225283331772,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.494096864172033,0.251335208800269,0.795825888164603,0.38992817423824,0.898819408654221,0.648414149624083,0.796565093017469,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.316182685621286,0.147610147979602,0.31399745568275,0.246794327843601,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0,0.482354319504834,0,0,0.972811360650212,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.757736633841335,0.179397413521912,0,0.554259570499814,0.37898282354097,0.162964976442026,0.509235257325564,0.704070744865506,0.670025029767263,0.238043640886014,2.14647012643579,0.945810864637146,1.10732344824387,0.956728611944923,0.491589944147214,1.03610989119537,0.578596234326046,0,0.54390568381871,1.47529281905711,1.10374698521893,0.160550589987792,0.117211686592203,0.655739781506702,0.252470927204373,0.315508219416257,0,0,0,0.222798674082394,0.566153061577665,0.404810701674894,0.292255857911312,0,0.321321316421807,0.425820255624806,0.35613120733451,0.162886959353576,0.659880491890142,1.32745138339963,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,0.258428293168221,0,0,0.948110273807448,1.05418608574999,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0.532020700926821,0,0,0,0.23467170806371,0.63549621259146,0,0.8244312647074,0.645857706783622,1.08563264870681,0.954978752025092,1.31312719796049,0.582961673259701,0.370850604021019,1.53783792718067,1.23832120777933,0.740778109478847,0.753473828018764,0.820165366326151,1.60144721244566,4.07948231985253,4.89830083132803,4.69879910935041,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0.87345025498471,0.809186078308924,0.330613822901344,1.04702376793612,0.518459893167171,0,6.20062232552609,0,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,0.58678619322877,0.13020438484395,0.629156066554265,7.00593950395418,8.3528701814781,2.52808896502543,0.202725215290164,1.74608627180206,1.29920822977795,1.43221356533985,2.98022032171897,1.20195449519969,1.62458479892035,1.9183625490148,1.5241361331,1.00826185136841,2.82627854145282,1.73181314952593,1.63627663054197,0.906921534460845,0,0.269141569828427,0.167884616364078,0,1.31377732815827,0.915758121336325,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0.512201219238954,0.574354689556133,0.476293691283074,0.463537303779422,0,0,0.883193520806384,0,0.177475806159338,0.953744759789284,0.872078499793971,0.470546902076653,0.592302255241736,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.474540072496697,0.394017929502254,0.818462086339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| |||
|short_description=p13@Hnrnpf | |||
}} |
Revision as of 08:39, 14 September 2013
Short description: | p13@Hnrnpf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Hnrnpf_5end |
Coexpression cluster: | MCL_coexpression_mm9:102 |
Association with transcript: | 391bp_to_ENSMUST00000163168, ENSMUST00000170346, NM_001166430, NM_001166431, uc009dlf.2, uc012eqy.1_5end |
EntrezGene: | Hnrnpf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.03e-17 | 48 |
immune system | 1.03e-17 | 48 |
thymus | 7.84e-17 | 23 |
neck | 7.84e-17 | 23 |
respiratory system epithelium | 7.84e-17 | 23 |
hemolymphoid system gland | 7.84e-17 | 23 |
pharyngeal epithelium | 7.84e-17 | 23 |
thymic region | 7.84e-17 | 23 |
pharyngeal gland | 7.84e-17 | 23 |
entire pharyngeal arch endoderm | 7.84e-17 | 23 |
thymus primordium | 7.84e-17 | 23 |
early pharyngeal endoderm | 7.84e-17 | 23 |
hemopoietic organ | 8.92e-17 | 29 |
immune organ | 8.92e-17 | 29 |
hematopoietic system | 1.86e-16 | 45 |
blood island | 1.86e-16 | 45 |
pharynx | 6.95e-16 | 24 |
gland of gut | 6.95e-16 | 24 |
upper respiratory tract | 6.95e-16 | 24 |
chordate pharynx | 6.95e-16 | 24 |
pharyngeal arch system | 6.95e-16 | 24 |
pharyngeal region of foregut | 6.95e-16 | 24 |
segment of respiratory tract | 7.84e-15 | 27 |
mixed endoderm/mesoderm-derived structure | 9.28e-13 | 35 |
connective tissue | 3.38e-12 | 46 |
respiratory tract | 9.33e-11 | 41 |
respiratory system | 2.40e-10 | 42 |
craniocervical region | 9.90e-09 | 36 |
gut epithelium | 4.16e-08 | 55 |
anterior region of body | 3.19e-07 | 43 |
lateral plate mesoderm | 4.23e-07 | 87 |
endo-epithelium | 4.79e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.