FFCP PHASE1:Hg19::chr9:140189285..140189325,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1052|description=CAGE_peak_at_chr9:140189285..140189325,+|id=chr9:140189285..140189325,+|ontology_enrichment_celltype=CL:0002322!3.59e-07!5|ontology_enrichment_celltype_v019=CL:0002178;1.31e-14;3|ontology_enrichment_celltype_v019_2=CL:0002178,1.22e-14,3|ontology_enrichment_development_v019=UBERON:0006242;2.70e-40;1!UBERON:0009497;3.53e-13;13|ontology_enrichment_disease=DOID:0050687!6.74e-11!143;DOID:305!5.65e-10!106;DOID:3493!1.30e-09!2;DOID:299!5.01e-07!25;DOID:162!5.92e-07!235|ontology_enrichment_disease_v019=DOID:3493;1.05e-79;2!DOID:299;2.13e-07;25|ontology_enrichment_disease_v019_2=DOID:3493,1.05e-79,2;DOID:299,2.14e-07,25|ontology_enrichment_uberon=UBERON:0002294!2.48e-09!7;UBERON:0001173!2.48e-09!7;UBERON:0004912!2.48e-09!7|ontology_enrichment_uberon_v019=UBERON:0002294;1.70e-23;7!UBERON:0001173;1.70e-23;7!UBERON:0002110;1.96e-14;3!UBERON:0002114;1.96e-14;2!UBERON:0002394;3.10e-11;4!UBERON:0003928;3.10e-11;4!UBERON:0000945;2.63e-09;5!UBERON:0010039;2.63e-09;5!UBERON:0002108;3.35e-09;4!UBERON:0005409;6.52e-08;22!UBERON:0002423;2.46e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.48e-18,9;UBERON:0001173,1.48e-18,9;UBERON:0004912,1.48e-18,9;UBERON:0002110,1.83e-14,3;UBERON:0006242,1.83e-14,3;UBERON:0002114,2.09e-14,2;UBERON:0002108,3.49e-09,4;UBERON:0002394,6.34e-08,6;UBERON:0003928,6.34e-08,6;UBERON:0009497,2.43e-07,25;UBERON:0000015,2.43e-07,25;UBERON:0002423,2.43e-07,25;UBERON:0006235,2.43e-07,25;UBERON:0004161,2.43e-07,25;UBERON:0005409,4.15e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32727527078292,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247247575143499,0.337017719270924,0,0,0,0,0,0.137539436597234,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82785911099448,3.16986604953901,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.940634592723046,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:140189285..140189325,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1052 | |||
|description=CAGE_peak_at_chr9:140189285..140189325,+ | |||
|id=chr9:140189285..140189325,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.59e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.31e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.22e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.70e-40;1!UBERON:0009497;3.53e-13;13 | |||
|ontology_enrichment_disease=DOID:0050687!6.74e-11!143;DOID:305!5.65e-10!106;DOID:3493!1.30e-09!2;DOID:299!5.01e-07!25;DOID:162!5.92e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.05e-79;2!DOID:299;2.13e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.05e-79,2;DOID:299,2.14e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.48e-09!7;UBERON:0001173!2.48e-09!7;UBERON:0004912!2.48e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.70e-23;7!UBERON:0001173;1.70e-23;7!UBERON:0002110;1.96e-14;3!UBERON:0002114;1.96e-14;2!UBERON:0002394;3.10e-11;4!UBERON:0003928;3.10e-11;4!UBERON:0000945;2.63e-09;5!UBERON:0010039;2.63e-09;5!UBERON:0002108;3.35e-09;4!UBERON:0005409;6.52e-08;22!UBERON:0002423;2.46e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.48e-18,9;UBERON:0001173,1.48e-18,9;UBERON:0004912,1.48e-18,9;UBERON:0002110,1.83e-14,3;UBERON:0006242,1.83e-14,3;UBERON:0002114,2.09e-14,2;UBERON:0002108,3.49e-09,4;UBERON:0002394,6.34e-08,6;UBERON:0003928,6.34e-08,6;UBERON:0009497,2.43e-07,25;UBERON:0000015,2.43e-07,25;UBERON:0002423,2.43e-07,25;UBERON:0006235,2.43e-07,25;UBERON:0004161,2.43e-07,25;UBERON:0005409,4.15e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32727527078292,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247247575143499,0.337017719270924,0,0,0,0,0,0.137539436597234,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82785911099448,3.16986604953901,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.940634592723046,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:140189285..140189325,+ | |||
}} |
Revision as of 08:23, 14 September 2013
Short description: | p@chr9:140189285..140189325, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:140189285..140189325, + |
Coexpression cluster: | C1052_signet_colon_mucinous_papillotubular_adenocarcinoma_gall_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
biliary system | 1.48e-18 | 9 |
biliary tree | 1.48e-18 | 9 |
biliary bud | 1.48e-18 | 9 |
gallbladder | 1.83e-14 | 3 |
gall bladder primordium | 1.83e-14 | 3 |
duodenum | 2.09e-14 | 2 |
small intestine | 3.49e-09 | 4 |
bile duct | 6.34e-08 | 6 |
digestive system duct | 6.34e-08 | 6 |
epithelium of foregut-midgut junction | 2.43e-07 | 25 |
anatomical boundary | 2.43e-07 | 25 |
hepatobiliary system | 2.43e-07 | 25 |
foregut-midgut junction | 2.43e-07 | 25 |
septum transversum | 2.43e-07 | 25 |
gastrointestinal system | 4.15e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.05e-79 | 2 |
adenocarcinoma | 2.14e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.