FFCP PHASE1:Hg19::chr9:138392519..138392558,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51116 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14495 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000485333,ENST00000488610_5end | |||
|coexpression_cluster_id=C1419 | |||
|description=CAGE_peak_1_at_MRPS2_5end | |||
|id=chr9:138392519..138392558,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.21e-35!254;CL:0002321!8.86e-22!248;CL:0000220!3.66e-21!246;CL:0000076!8.68e-12!62;CL:0000548!3.28e-10!679;CL:0000004!3.28e-10!679;CL:0000255!3.28e-10!679;CL:0000012!9.25e-10!682;CL:0000222!8.08e-09!119;CL:0000223!2.70e-07!59;CL:1000449!2.98e-07!16;CL:1000497!7.77e-07!18;CL:0002518!7.77e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.51e-07;15!CL:1000497;4.47e-07;17!CL:0002518;4.47e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.14e-35,253;CL:0002321,3.08e-22,250;CL:0000076,1.20e-11,63;CL:0000222,3.67e-09,121;CL:1000449,1.55e-07,15;CL:0000223,2.22e-07,58;CL:1000497,4.62e-07,17;CL:0002518,4.62e-07,17;CL:0002078,8.07e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.96e-20!235;DOID:14566!1.19e-19!239;DOID:0050687!7.89e-15!143;DOID:305!4.30e-14!106;DOID:0050686!1.14e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.96e-20,235;DOID:14566,1.19e-19,239;DOID:0050687,7.89e-15,143;DOID:305,4.30e-14,106;DOID:0050686,1.14e-07,137 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006554;1.22e-08;30!UBERON:0001008;1.22e-08;30!UBERON:0002113;2.95e-08;24!UBERON:0011143;2.95e-08;24!UBERON:0006555;1.51e-07;15!UBERON:0004819;1.51e-07;15!UBERON:0001285;1.51e-07;15!UBERON:0007684;1.51e-07;15!UBERON:0000353;2.15e-07;15 | |||
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| |||
|short_description=p1@MRPS2 | |||
}} |
Revision as of 08:08, 14 September 2013
Short description: | p1@MRPS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MRPS2_5end |
Coexpression cluster: | C1419_Mesenchymal_Alveolar_Renal_Bronchial_Keratocytes_Trabecular_Pericytes |
Association with transcript: | 0bp_to_ENST00000485333, ENST00000488610_5end |
EntrezGene: | MRPS2 |
HGNC: | 14495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.14e-35 | 253 |
embryonic cell | 3.08e-22 | 250 |
squamous epithelial cell | 1.20e-11 | 63 |
mesodermal cell | 3.67e-09 | 121 |
epithelial cell of nephron | 1.55e-07 | 15 |
endodermal cell | 2.22e-07 | 58 |
kidney cell | 4.62e-07 | 17 |
kidney epithelial cell | 4.62e-07 | 17 |
meso-epithelial cell | 8.07e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.52e-12 | 199 |
trunk region element | 4.73e-11 | 101 |
unilaminar epithelium | 4.37e-10 | 148 |
mesenchyme | 7.91e-10 | 160 |
entire embryonic mesenchyme | 7.91e-10 | 160 |
epithelial tube | 1.02e-09 | 117 |
subdivision of trunk | 1.10e-08 | 112 |
cell layer | 3.63e-08 | 309 |
epithelium | 1.21e-07 | 306 |
epithelial vesicle | 1.52e-07 | 78 |
nephron epithelium | 1.55e-07 | 15 |
renal tubule | 1.55e-07 | 15 |
nephron tubule | 1.55e-07 | 15 |
nephron | 1.55e-07 | 15 |
uriniferous tubule | 1.55e-07 | 15 |
nephrogenic mesenchyme | 1.55e-07 | 15 |
parenchyma | 2.18e-07 | 15 |
kidney | 2.42e-07 | 26 |
kidney mesenchyme | 2.42e-07 | 26 |
upper urinary tract | 2.42e-07 | 26 |
kidney rudiment | 2.42e-07 | 26 |
kidney field | 2.42e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.96e-20 | 235 |
disease of cellular proliferation | 1.19e-19 | 239 |
cell type cancer | 7.89e-15 | 143 |
carcinoma | 4.30e-14 | 106 |
organ system cancer | 1.14e-07 | 137 |
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